Penaeus vannamei (Pacific white shrimp): 113820224
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Entry
113820224 CDS
T06111
Symbol
Mmp1
Name
(RefSeq) stromelysin-3 isoform X1
KO
K07763
matrix metalloproteinase-14 (membrane-inserted) [EC:
3.4.24.80
]
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pvm01002
]
113820224 (Mmp1)
Enzymes [BR:
pvm01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.80 membrane-type matrix metalloproteinase-1
113820224 (Mmp1)
Peptidases and inhibitors [BR:
pvm01002
]
Metallo peptidases
Family M10
113820224 (Mmp1)
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Motif
Pfam:
Hemopexin
Peptidase_M10
PG_binding_1
Reprolysin_4
Reprolysin_5
Peptidase_M57
Reprolysin_3
DUF4953
Astacin
Reprolysin_2
Motif
Other DBs
NCBI-GeneID:
113820224
NCBI-ProteinID:
XP_027228336
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Position
39:complement(13448508..13474737)
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AA seq
576 aa
AA seq
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MLIRKILGALSLVTLASSTPVPIAGTTTAMMYLARFGYLAPTATNPQSGALLSEETVTDA
VKEFQAFAGLNQTGELDDETVKMMNTPRCGVKDKVGYGSDARKKRYALQGSRWRVRDLNY
RITKYPRGLTKASVDREIAAAFKVWSDVTELSFTPVTSGKVHIEIRFEKGEHGDGDPFDG
PGGTLAHAYFPIYGGDAHFDDTEAWTIDSYRGTNMFQVAAHEFGHSLGLSHSDVRSSLMA
PFYRGYEPSFELDQDDLNGIQALYGKKTTKPTPATLRPPTIGGGGTDEGVTGKPSSVLCG
DPSVDAIVTMSDQNTYVFKGSRYWRLTEKGVDSGYPKSISEDWDGLPSNIDAAFTWTNGK
TYFFRGGEYWRFSDLTMDADYPKQISKGFSGIPDDIDAAFVWSGNGKIYFFKGSKYWRFD
PTQRPPVKESYPKPISNWEGLPNSIDDALQYSNGYTYFFKDGNYWRFNDRRFKIDSGDPA
FPRPAGYWWFGCPASGSQMDATQTGTTDPLADEAHDDTFDADGSEDYIDSNNWLTPRVAG
SRSVGYRLNGAPSNTLALSAALTFTLVFVLQSLRWM
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgctaattaggaagatcctaggggcactatccctggtgactttggcatcctccacgccc
gtccccatcgcaggcaccacgacagctatgatgtacttagcaagatttggctacttggcc
ccgacagcgaccaacccacagtcaggagcgctcttgtctgaagaaaccgtcacggatgct
gtcaaggaattccaggccttcgctggactgaaccaaacgggcgagctggacgacgaaaca
gtgaagatgatgaatactccgagatgcggcgtcaaggacaaggtcgggtacggttcggac
gcgcgcaagaagagatacgcgctccaaggctccaggtggcgcgtgcgggatctcaactac
aggatcaccaagtacccgcgcggcctcaccaaagcttcggtcgacagggagatcgccgcc
gctttcaaggtgtggtccgacgtgaccgagctgtctttcacgcccgtgacgtcaggcaag
gtgcacatcgagatccgcttcgagaagggcgagcacggcgacggcgaccccttcgacggt
ccagggggcaccctcgcccacgcctacttcccgatctacggtggagacgcccacttcgac
gacacggaggcttggacgatcgactcctatagaggtacaaacatgttccaagtcgccgcg
cacgaattcggacactccctcggtctgtctcactccgacgttcgctcctccctcatggcg
ccgttctaccgcggctacgagcccagtttcgagctggaccaggacgatctgaacggcatc
caggctctgtacggcaagaagaccaccaagcccaccccggccaccctccgccctcccacc
atcggcggaggcggcaccgacgagggcgtgaccggaaagcccagcagcgtgttgtgcgga
gacccctccgtcgacgccatcgtcaccatgtctgaccagaacacttacgttttcaagggc
tcgcgttactggagactcacagagaagggcgtggacagcgggtacccgaagtctatctct
gaagactgggacggacttccctcgaacatcgacgctgcctttacctggaccaacggcaag
acgtacttcttcaggggtggcgaatactggcgcttctccgacctgaccatggacgccgac
tacccgaagcagatcagcaagggcttctctggcattcccgacgacattgacgcagctttc
gtctggtcaggaaacggaaagatctatttcttcaagggttcaaagtactggcgttttgac
cccactcagcgacccccagtgaaggagagctaccccaagcccatttccaactgggagggt
ctgcccaactctatcgacgacgcccttcagtattccaacggctacacgtacttcttcaag
gacggtaactactggcgattcaacgatcggcgattcaagatcgactcaggagaccccgct
ttcccgcgtcctgctggctactggtggttcggctgccccgcctccggctcccagatggac
gccactcaaaccgggaccacagaccccttggccgacgaagcccacgatgacactttcgat
gctgacggctcagaggactatatagacagcaacaattggctgaccccacgtgtcgcgggc
tcaaggagtgttggctacaggctaaacggcgccccctcgaacaccttggcgctctcggct
gcactcactttcactcttgtctttgtccttcagtcgctccgctggatgtga
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