Penaeus vannamei (Pacific white shrimp): 113820651
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Entry
113820651 CDS
T06111
Name
(RefSeq) serine/arginine-rich splicing factor 1B
KO
K12890
serine/arginine-rich splicing factor 1
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Pathway
pvm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113820651
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pvm03041
]
113820651
Spliceosome [BR:
pvm03041
]
Common components
Common spliceosomal components
SR proteins
113820651
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_7
Nup35_RRM_2
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
113820651
NCBI-ProteinID:
XP_027228793
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All DBs
Position
30:complement(29391903..29402736)
Genome browser
AA seq
299 aa
AA seq
DB search
MPLREAERARRAPIGRPTSRGGGGGWACGGRRARGTPFRHSGSGAAEVYDVPVFSAIMSY
GRGNNECRIYVGNLPPDIRTKDIEDLFYKFGKIVFIDLKNRRGPPFAFVEFEDSRDAEDA
VHSRDGYDYDGYRLRVEFPRNSVPGAARGGSGRGRGRGPPARRSQYRVSVTGLPPTGSWQ
DLKDHMREAGDVCYADVYKDGTGVVEFLRYEDMKYAVKKLDDSKFRSHEGENSYIRVKED
YGGSSPASGGGGGGGRGRSRSRSRSPRGYRGSPTYSPVRRSYSRSPSRSRSPSRSRDRY
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgcccctccgagaggcagaaagagcgagaagggctccgatagggcggcctacttcgcgc
ggcggcggcggcggctgggcgtgcggcggccggcgagcgcgagggacgccattccgccat
tccggctcgggcgcggcggaggtgtacgacgtgccggtattttcagcgatcatgtcttac
gggagaggaaacaacgagtgtcgcatctacgtggggaacctgcccccggacatcaggacc
aaggacatcgaggacctgttctacaaattcggcaagatcgtgttcatcgacctgaagaac
cgccgagggcccccgttcgccttcgtcgaattcgaggattcaagggatgccgaagatgca
gtacactctcgtgatgggtatgactacgatggctaccgtctgagagtggaattccctagg
aacagtgtgccaggagcagccagaggaggctcaggaagggggcgaggcagaggtcctcca
gcccgaagatcacaatacagagtttcagtcacaggcctgccccctactgggagctggcag
gacctcaaggaccacatgagggaggcaggagatgtgtgttatgctgacgtgtacaaagat
ggcacaggtgtggtcgagttcctccgctatgaagatatgaaatatgctgtcaagaaactt
gatgattcaaagttccgctcacatgagggtgaaaattcttacattcgggtgaaagaagat
tatggaggttctagtccagcatccggtggtggtggaggaggaggacgtggtcgctcaaga
tccaggtcacgatccccacgaggctaccgagggtcacccacctactctcctgttcgccga
tcttattctaggtcgccctcacgatctaggtcaccatcacgctcccgagatcgctactag
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