Penaeus vannamei (Pacific white shrimp): 113820725
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Entry
113820725 CDS
T06111
Symbol
mei-9
Name
(RefSeq) DNA repair endonuclease XPF
KO
K10848
DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Pathway
pvm03420
Nucleotide excision repair
pvm03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
113820725 (mei-9)
03460 Fanconi anemia pathway
113820725 (mei-9)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pvm03032
]
113820725 (mei-9)
03400 DNA repair and recombination proteins [BR:
pvm03400
]
113820725 (mei-9)
DNA replication proteins [BR:
pvm03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
113820725 (mei-9)
DNA repair and recombination proteins [BR:
pvm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
113820725 (mei-9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC4
SAM_KSR1
Motif
Other DBs
NCBI-GeneID:
113820725
NCBI-ProteinID:
XP_027228875
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All DBs
Position
25:30958299..30967347
Genome browser
AA seq
887 aa
AA seq
DB search
MLEYENQMLLDLLHEDGLLVAAKGLGLERILTSLIITYNDPGNLVLVIGTTSREEEYVLS
QLEGQGVTPIPRCVTAECSVNERSQIYANGGVLFVTSRILVMDILMERVPADLITGVIVW
KAHKILESCQEAFILRLFRMKNKTGFVKGLSSSPLSFTAGFCHVERVMRNLFVKKLYLWP
RFHMDINACLEKCKPEVIELHLKMTTPVKQIQMAVLDLITETVQELRRSNSTIDTEEFTP
ENAISKSFEKILKVQLEPIWHQLSSRTKMLIADLKVMRTVLMYLTQYDCVTFYNLVNSLR
TTETAIQSSGWMFLGAAETLFVNAKLRVFGSAASPTKKSVREDNAKKLKREYIDQNLEAN
PKWLALSEVLAEIREEVQEGKNLEKCLVVTQDDRTSQQLKEYLIDGAQVVLRRIFYRTIG
AKMGLQPPPNLFRDKDKNMQKDKGKKGKKTKTTEEAKEEVTLTQITKKYEFVGQDKSEFT
NEAETSEEIEEIRRRFLSPLIMVQSVRDNSDPFMMTRLLEEVQPKYIIMYDSDLTFIRQV
EVWQANHIERVRVYFLLYKGTTEEQVYLTNIKREKDAFEYLINEKATMVIPEYNDGKSGD
HPDLSRDPRKANEIDISGNSNTRKGGQAGEEAKVPQRIIVDMREFRSELPALIHKRGIDI
DPVTIEVGDYILTPDVCVERKSLSDLIGSLNSGRLYNQAQAMTRYYKKPILLIEFDQNKS
FHLQGRFFLSSDASSSAKDVAAKLQLLTLHFPHLRLLWCPSPYATAEIFQLLKEGKEEPV
VAQAQAITAETNPEVDSDKFNPQIKDFISKLPGITTKNIYSVLNKVSDLSELLSLSKDEL
TEILGNSRNAQALYSGLHHCMKPPEKEDLKKGSKFTKKGLKRFRTKM
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
atgttggaatatgagaaccaaatgctgttagacctcctgcatgaggacggcctccttgta
gcagctaaaggattgggcttagaacggattttgacaagtctaatcatcacatacaatgat
cccggtaacctagtgctagtgattggcactacctcaagggaggaggagtatgtattatcc
cagctagaaggccaaggtgttactccaatccctagatgcgttacggcagaatgctcagtt
aatgaaagatcccaaatatatgcaaatggtggagtgctgtttgtgacgtctcgcatttta
gtcatggacatcttgatggaacgagtgccagctgatttgataacaggtgtgattgtttgg
aaagctcacaagattctagaatcatgccaagaggcttttatcctgaggttattccgtatg
aaaaacaaaactggctttgtgaagggccttagtagtagccctttgtcattcacagcggga
ttctgccacgtggagcgcgttatgcggaatctctttgtcaaaaagttgtacctgtggccg
aggtttcatatggatattaatgcttgtttggagaagtgtaaaccagaggtaattgagctg
cacctgaagatgactaccccagttaagcaaatccagatggccgtgttagacctgattact
gaaactgttcaggaactccgtcgctccaacagtaccattgacactgaagagttcacacct
gaaaatgcaatatccaagtcctttgaaaagattctgaaagtccagctggaacccatctgg
caccagctgtcatctcgtacgaagatgttaattgcagatctgaaagtcatgagaactgtc
ctaatgtatttgacccagtatgattgtgtgaccttctacaatcttgtaaactctttgcgg
acaactgagacagctatccagagctcgggctggatgtttttaggggcagcagaaacactt
tttgttaatgcaaaactgcgagtgtttggaagtgctgcaagcccaacaaagaaatctgtt
agagaagataatgccaagaaactgaagagggaatacatagaccaaaatttagaggctaac
ccgaagtggttggcattgtcagaggttttggccgaaattcgagaagaagtgcaagaggga
aagaatttggagaagtgtcttgttgtgactcaagatgatcgaacatcacaacagctaaaa
gagtacttgatagatggagcccaagtagtgcttcgccgtattttttaccgaacgataggg
gcaaagatgggtttacagcccccacccaacctctttagggacaaggataaaaatatgcaa
aaagataaagggaaaaagggcaagaagacgaagacaactgaagaggcgaaggaagaagtg
acactgacgcagatcacaaagaaatatgaatttgttggtcaggataaatctgaatttacc
aatgaggcagaaaccagtgaagaaatagaggagatacgaagaaggtttctctctccgctc
atcatggtgcagtctgtacgggataatagtgacccattcatgatgacacggctgctagag
gaagttcaaccaaagtacattataatgtatgattcagacttgacattcatccgccaagtt
gaggtgtggcaagctaatcatatagagcgggtaagagtgtatttcttgttatacaagggg
accactgaagagcaagtttatctcactaatatcaaaagagaaaaggatgcatttgagtac
ctgattaatgaaaaagctacgatggtcatccccgagtacaatgatggtaagagtggcgac
catccagacttgagccgtgacccccgcaaggccaatgagattgatatatcaggaaacagc
aacacaaggaaaggagggcaagcaggagaggaggcaaaagttccacagagaataattgtt
gatatgcgggagtttcggagtgaacttcctgctctaatccataagaggggcattgatatt
gatccggttacaatagaggttggtgattacatcctgactccagatgtgtgtgtagagcgg
aaaagtctaagtgacttgattggatccttgaattctggccgactgtataatcaagcacag
gcaatgacaagatattacaagaaacccatcttgctcattgaatttgatcaaaataaatca
tttcatctccagggtcgattctttctgtcaagtgatgcatcttcatcagctaaggatgtt
gctgcaaaactgcaactgctgactttgcacttccctcatcttcggttactttggtgtcca
tcaccatatgctactgctgagatatttcaattgctcaaggaaggaaaggaagaacctgtt
gtagcccaagctcaagccatcactgctgagacaaacccagaagtagattctgacaagttc
aatcctcagataaaagacttcatatcaaaactacctggaataacaacaaagaacatctat
tctgtgttgaataaagtctcagatctatccgagctactgtcgctctcaaaggacgaacta
acagagatccttggcaacagtcgcaatgctcaggctctttactcaggccttcaccactgc
atgaagcccccagaaaaggaggacttgaagaagggcagcaagtttactaaaaagggtctc
aaaaggtttaggacaaaaatgtga
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