Penaeus vannamei (Pacific white shrimp): 113820726
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Entry
113820726 CDS
T06111
Name
(RefSeq) very low-density lipoprotein receptor isoform X1
KO
K20053
very low-density lipoprotein receptor
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvm04131
]
113820726
Membrane trafficking [BR:
pvm04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
113820726
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Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
DUF5050
SGL
Motif
Other DBs
NCBI-GeneID:
113820726
NCBI-ProteinID:
XP_069976832
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All DBs
Position
4:14585135..15365053
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AA seq
909 aa
AA seq
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MHWQEGLLLLLIAAAGSTTIPDESLNVTRVMEYVTCSPDKFECPNKEKCIPLSWCCDGTV
DCDDGSDEAPDICPGKGTAKRKKTEKSCKQNEFQCRDGKCIPHRWQCDGDGDCDDKSDED
SQYCEEVTKCTGVSSEHWLCGSGECIPLAWHCDEDWDCKDGSDELNCPNATCTSEQFTCA
LGKCISKRWRCDGDSDCDEGDLSDEIGCPNKTCSVNEVTCPDGKCISHNQICDGKEDCVN
GTDEHNCPTNECREGEYMCAGNMQCLRQEWLCDGDMDCPGKDDENEENCPHHCPEDYFMC
GDQSCILEQFKCNAFNECIDGSDELNCQKHCNETYEFNCGDKCIPMSQVCNGNIDCENGA
DEPTDGSCGRNECEELNGGCTHYCEDTRAGHYCKCKPGYMLVNSTQCEDINECLQPGHCS
QVCINLKGSFKCECVGGYARNPHHPQQCKAMEGHASLLFAHFTDIRKISLDHPEITAIVN
ETRGSTALDFVFKTGMIFWTDALDKCIYKAPIDEGSKKQVVISEEVTTVDGLTVDWLYNH
IYWTNTDRDTIEVADFNGDMRKTLYQDHMEEPRAIAVYPSEGWMFWTDWGQNAMIERGGM
DGRFREPIITEEIRWPNALTLDLVLRKIYWSDSKFHSIYSCDFDGSHRRVVLHSSEYLPH
PFSITVFEDTMYWTDWSKEAILRANKFTGQDVETIAHSHATPMTVHVYHSYRQPNGTNHC
TPLNGLCTHLCLPAPQKSPSDSKITCACPDGLVLMSDGLTCESKDGLETRTQLPNQDLIP
ITHNMEDEIRSTLAPAIVDFTPKKDLPSENESGNVAVAAILAAIGVLCVASAMAYMIYRY
FRKRSVHSMNFDNPVYKKTTTEDGFHLAGQQRTNCPRNSGQPRYQHQQYGVASPEDSLEP
LTHSNNNFV
NT seq
2730 nt
NT seq
+upstream
nt +downstream
nt
atgcactggcaagagggactgttgctgttgcttattgcagcggcaggatcgactaccatc
cccgatgagtccctaaacgtgacgagagttatggaatacgtgacttgttcgccggacaag
ttcgagtgcccaaacaaggagaagtgcatccccctgagctggtgctgcgacggaacagtt
gactgcgacgatggctcggacgaggctcccgacatctgcccaggcaaaggaactgccaag
cggaagaaaacagagaaatcatgcaagcagaatgagttccagtgcagagatgggaaatgc
attccccaccgctggcagtgcgatggtgatggtgactgtgacgacaaaagtgatgaggac
tcacagtactgtgaagaagtgaccaagtgcacaggagtttcaagtgaacattggctgtgt
ggctctggggagtgcattcccttggcatggcactgcgatgaggactgggactgtaaggat
gggtcagatgaactcaactgcccgaatgcaacttgcacatcagaacagttcacatgtgca
ttagggaaatgcatttccaaacggtggcgctgtgatggagacagtgactgcgatgaggga
gatttgtcagatgaaattggatgtcccaataagacatgttcagtaaatgaagtgacttgt
cctgatggcaaatgcataagtcacaaccagatttgcgatggaaaagaagactgcgtcaat
ggcacagatgaacataattgcccaacgaatgaatgccgcgaaggagagtacatgtgtgcg
ggtaacatgcagtgcctccgtcaggaatggctctgtgatggtgatatggactgccccggt
aaggatgatgaaaatgaagagaattgccctcatcactgccctgaagattacttcatgtgc
ggtgaccagtcatgcattcttgagcaattcaagtgcaacgctttcaatgaatgcattgat
gggtcagatgagttgaactgccaaaaacattgcaatgaaacatatgagttcaactgtggg
gacaagtgcattccaatgagtcaagtgtgcaatggcaacattgattgtgaaaatggagct
gatgagcccaccgatggaagctgtggcaggaatgagtgtgaggagctcaatggtggttgc
acccactattgtgaagacacccgtgctggacattactgcaagtgcaagcctgggtatatg
ctagtcaatagcacccagtgtgaagacatcaatgagtgcctgcaacctgggcactgttcg
caggtgtgcatcaacctcaagggctcattcaagtgtgagtgtgttggagggtatgccaga
aacccccaccatccccagcagtgcaaggctatggaaggacatgcctccttgctcttcgct
cacttcaccgacatcaggaaaatctctctggaccatccggagattacagccatcgtaaat
gagactcgtggttccacagccctggactttgtctttaaaactggaatgatattttggaca
gatgcacttgacaagtgcatttacaaagctcctattgatgaaggaagcaaaaagcaagtt
gtgatatcagaggaagtgacaacagttgatgggctaacagttgactggttgtacaaccac
atatactggaccaacactgacagggacaccattgaggtggcagattttaatggtgacatg
agaaaaacactctaccaagaccacatggaagaaccccgagccattgcagtgtacccctca
gaagggtggatgttctggactgactggggtcagaatgccatgattgagaggggtggcatg
gatggaagattcagagagccaatcatcactgaggaaatcaggtggcccaatgccctgact
cttgaccttgtgcttcgcaaaatctactggtcagattccaaattccactccatttattcc
tgcgactttgatggatcacatcgtagggttgtcctccactcttctgagtacctcccccat
ccattttccatcacagtctttgaggacaccatgtactggacagattggagcaaagaggcc
attttgcgtgccaacaagttcactggccaagatgttgaaaccatcgctcactcacatgct
acacctatgactgtgcatgtgtaccacagctaccgccagcccaatggcacaaaccattgc
actccactcaatggtctctgtacccacctgtgtctacctgcaccccagaagagcccctct
gattcaaaaattacctgtgcctgtccggatggccttgtgcttatgtctgatggcctgacc
tgtgagagcaaggatggcctagaaaccaggacccaattgcccaaccaggaccttatccca
ataacccataacatggaagacgagatccgcagcaccctggccccggcgatagtggacttc
accccgaagaaggacctcccgtcggagaacgagagcggcaacgtcgccgtcgccgccatc
ttggccgccatcggcgtcctctgcgtggcttcggcgatggcctacatgatctaccgctac
ttccggaaacgttcagtgcacagtatgaactttgacaaccctgtatacaagaagactaca
accgaggatggcttccaccttgcggggcagcagcgcaccaattgcccgaggaattctggc
cagccacggtaccagcaccaacagtacggggttgcatcgcctgaggattcgctggagcct
ctaacgcacagcaacaacaacttcgtatga
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