Penaeus vannamei (Pacific white shrimp): 113820870
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Entry
113820870 CDS
T06111
Name
(RefSeq) protein RRP5 homolog
KO
K14792
rRNA biogenesis protein RRP5
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pvm03009
]
113820870
Ribosome biogenesis [BR:
pvm03009
]
Eukaryotic type
90S particles
Other 90S particles
113820870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1_RRP5
TPR_14
S1
HAT_PRP39_C
TPR_19
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
TPR_16
ARM_TT21_5th
HAT_Syf1_CNRKL1_C
TPR_2
TPR_Slam
TPR_12
Motif
Other DBs
NCBI-GeneID:
113820870
NCBI-ProteinID:
XP_027229058
LinkDB
All DBs
Position
33:complement(27708952..27727481)
Genome browser
AA seq
1394 aa
AA seq
DB search
MGVSVKEQDLLPVKPSIEKSKSKKKKLKSGKGKPTEEPQNIPDVPLVSEDKPSIKKSSGK
KKKLKEKLSQEKPCEEHQNVPDEHVPLESEVKPSVKKRRNKKKKLKNGKEELGLEKPSEE
HQNVPDEHVPLETEVKASVKKSKGKKKKLKSSKEEMDVEKPSEEPQNLPEEEVPLVSEVK
QSAKKSTGKKKKLKSSKEELGLEKPNEEHQNGLDEHVPLEAEVKPSVKKRRGKKKKLKSG
KEEHTSEEQNVPDDHGPLVCETKPSDKKSAGEKKKLKSGKEELSQEKSSEELKNVPDEQV
PLVSEVSPSVEKSGGKKKKLMNGKAKQGLQTPKKESKHVPDEHVPLLYENITEGQVILGC
IQEVQDCELKISLPYRLSGTVSIKKISKAYTELVEKMAEGESQDEEGRPLQDLYRPGQLV
VTSVVSTDKIGARRKVNLSLMPQDVNSSLTAPLLEVGFVLPCAVASVENKGFIMDTGIAS
IRRAFLPHKAVQGADTVDVGSVMRCKVTKISSGVKDSWDVVLSADPKALSEAILPVASTT
NISLMIPGTAVDTTVSKVADYGLNITLAEYEGVVNRIHLKEPFDIIQKYKKGMKIRARVL
YTVPAKKVVHFTLQNIYSESSQLDLKEGDIVENAVVFESRSAGISLKLNDKYRGYCFLKD
LPYGHQNPRNVKKAFPVGHKSECSIIRYCYMDRMFIVSLQKKFSYDKIEVGTKLKATVKC
CKDRGILVALSKTVSGQIDYLMLDTQEKNPEKKYPPGLVLNCRVLYVMPEKKIIKLTNKK
GMVNSQLPIISEFDPNLIGTVSEGYIVSITPSGLLVAMYNNVKGFVPKSKATSEKVTSLD
AIFTMGQVVKFCIMKVEPEAKRMTLTLSIDEDVEMAEEEEEEKEGETIGEKEETKEKAET
ADTTKKVEESEKKKGKKRKKEEDCNGDIETTEKDEGTEKKKKKKKKGKIDLKEEPENTDE
GIVNFENKMENEAGTNDSTEKVEETEKKKGKKRKKEVECSMDTEITESEEGTVKKKKKDK
KKRKKNVVDEVKDLELENDTDEEAGVSDTGLTNKKPCLSVGTGFVWDVPDTLADKGQSSE
SEDEEEDEAKKKKNKKMTKAEREAMAKQEEQRLHELERARLDKDRQPQTAMDYEELLQTS
PNSSAVWIQFISFHLESAEMEKAKAVARRALQVINMREEQERLNIWTVILRLEVLYGTPE
TVQASYREALATNDEQQVHLAMAMVYAENDKIKDASNIYYIMTKKFGQVLDVWIKAGIFF
FRNKKFDEARKYMDRALIALEKKYHVELINRFGQLEFKFGEAERGRTMFESLLSNYPKRI
DVWSVYVDLLTKNGDIEGARTVLERMTGLKLKIRKMRGIFKKFLDFEKTHGTPQRVQAVK
KQVEDFVAAAIGKE
NT seq
4185 nt
NT seq
+upstream
nt +downstream
nt
atgggggtctcggtgaaagagcaagatttactcccagtaaaaccatccattgagaaaagc
aaaagcaagaagaaaaaactcaagagtggcaaggggaagcctacagaagaaccccaaaat
ataccagatgttcctttggtgtcagaggataagccatctattaagaaaagttcaggcaag
aagaaaaagctgaaggagaaacttagccaagagaaaccttgtgaagaacaccaaaatgtg
ccagatgaacatgttcctttggagtctgaggtaaaaccatctgttaagaaaaggagaaac
aagaagaaaaagctcaagaatggaaaggaggaacttggcttggagaaacctagtgaagag
caccaaaatgtaccagatgaacatgttcctttggaaactgaggtaaaagcatctgtgaag
aaaagcaaaggtaagaagaaaaagctcaagagtagcaaagaggaaatggacgtggagaaa
cctagtgaagaaccccaaaatttaccagaagaagaggttcctttggtgtctgaggtaaaa
cagtctgctaagaagagcacaggcaagaagaaaaagctcaagagtagcaaggaggaactt
ggcttggagaaacccaatgaagaacaccaaaatggattagatgaacatgttcctttggaa
gctgaggtaaagccatctgttaagaagaggagaggcaagaagaaaaagctcaagagtggc
aaagaggaacatacttcggaagaacaaaatgtaccagatgatcatggtcctttggtttgt
gagacaaaaccatccgataagaagagtgcaggcgagaagaaaaagctcaagagtggtaag
gaggaacttagccaggaaaaatctagtgaagaactcaaaaatgtaccagatgaacaggtt
cctttggtatctgaggtaagcccatccgttgagaaaagtggaggcaagaagaaaaagctc
atgaatggaaaagcgaaacagggcttgcagacacctaaaaaggaatccaaacatgtacca
gatgaacatgttcctttgctgtatgagaatatcacagaaggtcaggtgattttaggatgt
atacaagaagtccaggattgcgagttaaagatcagtcttccctaccgtttgtccggaact
gtgtccatcaagaagatcagcaaagcttacactgagcttgtggagaagatggcagaggga
gagagccaagatgaagagggaagaccattgcaagacctataccgacctgggcaattagtg
gtaacgtccgtggtcagtactgataaaataggcgcaagaaggaaagtaaacctctcgctg
atgccgcaagatgtaaactcctcactcactgcgccactcctggaagtaggctttgtactg
ccttgtgctgtggccagcgtagagaacaaaggcttcatcatggacactggcattgccagt
atacgaagggctttcttaccccacaaagcagtgcaaggtgcagatactgtggacgtggga
agtgtaatgcggtgcaaagtgaccaaaatcagcagtggtgtgaaagacagctgggatgtg
gtcctatctgctgatccaaaggcactgagcgaggccatactgcctgtcgcttccaccacc
aacatttccttgatgattcctgggacagctgttgataccactgtgtctaaggtcgcagat
tatggactgaacatcaccctggctgagtatgaaggggttgtgaaccgcatccaccttaag
gagccttttgacattatccagaagtataagaaaggcatgaaaataagggccagggtgctt
tacactgtgcctgcgaagaaagtggtgcatttcactctgcagaacatttactcagaaagc
tcacaactcgacctgaaagagggagacattgttgaaaatgcagtggtctttgagtcacgg
tctgcgggtatttccctcaaactgaacgacaagtaccgtggctactgtttcctgaaagat
ctcccatatggccatcaaaaccccaggaatgtgaagaaggcatttcccgtaggccataag
tcggagtgtagcattatcaggtactgctacatggatcggatgtttatcgtctcattgcag
aagaagttcagctatgataagatagaagtaggcacaaaactgaaagcaaccgtaaagtgt
tgcaaagaccgtgggatactagtggccctcagcaagactgttagtggccagattgattac
ctgatgttagatacacaggagaagaacccagagaagaagtatccccctggcttggtattg
aactgcagagtgttgtatgtgatgccggagaagaagattatcaagctcacaaataagaag
ggtatggtcaactcacagcttccaatcatatctgaatttgaccctaatctgataggcact
gtctcagaggggtacattgtgagcatcaccccatcaggattgctggtagctatgtataat
aatgtgaaaggttttgtaccaaagagcaaagccacatcagaaaaggtgacaagtctagat
gcaattttcaccatgggtcaggttgtcaagttctgcatcatgaaggtggaaccagaggca
aagagaatgacactgaccctgtctattgacgaggatgtggagatggctgaggaagaggag
gaggagaaggaaggggagaccataggagagaaagaggaaaccaaggagaaggcagagacc
gctgataccacaaagaaggtagaggaatctgagaagaaaaaaggaaagaaacgtaagaag
gaagaggactgtaatggagatatagagaccacagaaaaagacgagggaacagaaaagaaa
aagaaaaagaaaaaaaaaggcaagatagacctcaaggaggaaccagagaacactgatgag
ggcatagtgaattttgagaacaagatggaaaatgaagcaggaaccaatgacagtacagaa
aaggtagaggaaactgagaagaaaaaaggaaagaaacgtaagaaagaagtggaatgtagt
atggatacagagatcacagagagtgaagaaggaacagtaaagaaaaagaagaaagataag
aaaaagagaaaaaagaatgtggtggatgaagtaaaagatttagaattggaaaatgacaca
gatgaggaagcaggtgtgagtgatactggactgacaaacaagaagccatgcctctctgta
gggactggctttgtatgggatgtcccagacactcttgcagacaaggggcagtccagtgag
agtgaagatgaagaggaggatgaggcaaaaaagaagaaaaacaaaaagatgacaaaggca
gagcgtgaagccatggccaagcaggaggaacagcgactgcatgagcttgagcgtgctagg
ctggataaagatcgacagccacaaactgccatggactatgaggagctcttgcagacaagt
ccaaactcctctgcagtttggattcagtttattagcttccatttagagagcgcagagatg
gagaaggctaaggcagttgcacggcgggcgctgcaggtgatcaacatgcgggaggagcag
gagaggctcaatatctggacagtgatccttaggctagaggtgctgtatgggacgccagag
actgtgcaggcatcatatcgagaggctttggccacaaatgacgagcaacaggtgcacctt
gccatggctatggtctatgctgagaatgataagattaaggatgcttccaacatctactac
attatgaccaagaagtttggccaagtgctggatgtgtggatcaaagcaggaattttcttc
tttagaaataaaaagtttgatgaagccagaaagtacatggatagagcactgattgccttg
gaaaagaagtatcatgtggagctcatcaaccgctttggccaacttgaattcaaatttggc
gaggcagagaggggaaggaccatgttcgagagtctgctcagcaactatcccaaacgtata
gatgtttggagtgtctatgtagatctgttgactaagaatggagatatagaaggggcaagg
accgtcttggaacgcatgacaggcctgaagctaaagatccgcaagatgcgtgggatcttt
aagaagttcctagactttgagaagactcatggaacaccacagagggtccaggctgtgaag
aagcaggtggaagactttgtggctgctgcaattggcaaggagtaa
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integrated database retrieval system
