Penaeus vannamei (Pacific white shrimp): 113820959
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Entry
113820959 CDS
T06111
Name
(RefSeq) RING-type E3 ubiquitin-protein ligase PPIL2
KO
K10598
peptidyl-prolyl cis-trans isomerase-like 2 [EC:
5.2.1.8
]
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Pathway
pvm04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
113820959
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pvm03041
]
113820959
03110 Chaperones and folding catalysts [BR:
pvm03110
]
113820959
04121 Ubiquitin system [BR:
pvm04121
]
113820959
Enzymes [BR:
pvm01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
113820959
Spliceosome [BR:
pvm03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
113820959
Complex C
U4/U6.U5 tri-SnRNP related factors
113820959
Other splicing related proteins
Minor spliceosome components
Minor spliceosome associated proteins
113820959
Chaperones and folding catalysts [BR:
pvm03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
113820959
Ubiquitin system [BR:
pvm04121
]
Ubiquitin ligases (E3)
U-box type E3
113820959
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pro_isomerase
Rtf2
dCache_2
U-box
zf-Nse
Motif
Other DBs
NCBI-GeneID:
113820959
NCBI-ProteinID:
XP_069983974
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All DBs
Position
12:complement(10777004..10781719)
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AA seq
519 aa
AA seq
DB search
MGKRQHQKDKMYLTSTEWSTLYGGYKKSSHTGARAEFRRLPLTHCTLSLMPFNHPYIDPK
GNVFDLEAILPFLKRFKVNPVTGEPLNEKDLIKVTFHRASTGEYHCPVLYKPLTNTSHVV
AVKTTGNVFCYEAIEQLNIKVNNWRELLTDKPFTRNDLIIIQDSQDLTKFNISKFHHVIK
NLKVEDEETVKARSDASMRLKNVSRDTQQILEEFNKTYKDDGPKEEAGERVADKFNAAHY
STGKVAASFTSTSVDVETKQEAAVLEDDVVRYQRVKKRGYVSLKTNLGTLNLEVYCDTVP
KASENFVRLCDRGYYKGTKFHRSIRHFMIQGGDPEGTGKGGDSIWGKPFKDEFRPNLSHK
GRGVLSMANSGPDTNKSQFFITYRSCTHLDGKHSIFGRVVGGLSTLSAMEAIETDNKDIP
IEDIIIQDTTVFVDPFKEADVELAEERRLEMEKRKAEEDELKNRKKPKVVDDQFKMFRSG
VGKFLDLGKSSVSKEDLQTAAQQKKKKDATYGFKDFSIF
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atggggaaacgacagcatcagaaagataaaatgtacctgacctccacagagtggtcaaca
ctctatggaggttacaaaaaatcatcacacactggagcccgagcagaattcagacgattg
ccactcacgcattgtactctctcgctgatgcccttcaaccacccgtacattgatccgaag
ggaaatgtttttgatctagaggcaatccttccttttcttaagagattcaaagtgaatcca
gtcactggagagccattgaacgaaaaggacctgataaaagttacctttcaccgagcaagt
accggagaataccactgccctgtattgtacaagccccttaccaacacctctcatgtggtt
gcagtcaagacaactggcaatgtcttctgctatgaagccatagagcagctgaatattaaa
gtcaataattggagggagctcctcacagacaagcccttcacccgaaatgacttgattatt
attcaggattcacaagacctgaccaagttcaacatcagcaaatttcatcatgtcataaag
aacctgaaagtagaggatgaggagactgttaaagctcgttcagatgcatccatgagactg
aagaatgtttcacgagatactcagcagattctggaagagttcaacaaaacatacaaagat
gatggcccaaaggaggaagcaggagaacgagtagcagacaagtttaatgcggcacactat
tcaactgggaaagtagcagccagctttacctcaacatcagtggacgtggaaacaaaacaa
gaagcagcagtactagaagacgatgtagtcagatatcagagggttaaaaagagaggttat
gtttctcttaagacaaatttgggtacgttgaacctggaagtgtactgtgacactgttcca
aaagcctcagagaacttcgtaaggttatgtgatcgtggatattacaagggaacaaagttc
catagatcaatcagacatttcatgatacaaggaggagatccagaaggtacaggcaaaggt
ggagactccatttggggaaaaccattcaaggatgaatttcgacccaacttgtcccataag
gggcggggagtgctctctatggccaattcaggacctgacaccaacaaaagccaattcttt
attacatatagatcctgtacccatcttgatggtaaacacagcatatttgggcgagtagtg
ggtggcctttcaacattgtctgcaatggaagctatagagacagacaacaaggatattcca
attgaggacattatcattcaggacaccacagtatttgttgaccccttcaaggaagcagat
gtggagcttgcagaagagaggcgacttgaaatggagaaaagaaaggcagaagaagatgag
ctgaagaacagaaaaaagccaaaggtagtggatgaccagttcaagatgtttcggtctggt
gttggcaagttccttgacctaggaaagtcatcagtttcaaaagaagaccttcaaacagca
gcacagcagaagaaaaagaaggatgcaacatatggctttaaggacttcagtattttttag
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