Penaeus vannamei (Pacific white shrimp): 113821023
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Entry
113821023 CDS
T06111
Name
(RefSeq) LOW QUALITY PROTEIN: nucleoprotein TPR
KO
K09291
nucleoprotein TPR
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Pathway
pvm03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
113821023
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvm03019
]
113821023
Messenger RNA biogenesis [BR:
pvm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
113821023
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
Tropomyosin
RBD-FIP
Motif
Other DBs
NCBI-GeneID:
113821023
NCBI-ProteinID:
XP_069985922
LinkDB
All DBs
Position
14:24101537..24228557
Genome browser
AA seq
2391 aa
AA seq
DB search
MAGSLESRNKRIQELQEQVEKLEEQLTVVTRAKCEAVIRAEEAGSRELHLQYKEKRLEQE
RSLLTRQVDRLQQQLEQRVEESVNQRREHSTTILRLQTDLNHKLEELRVEREENERVQKG
LEEKSQRIEELLSALNASRESEMKLDETYRQELVAQKKLADIYQGSCQDEKERCTELEKA
VEELRKLLQEASEQYGCLERAKKAAEEESAEALQQSNLLVKELKEELDKVNLLMEASSKK
DLGGLEDLSPAAKCCPSQLVSRGLSLXQLYSEYMSVSEKHSGTEEENKRLADYVDQILQE
SEDRVPVFKKQRDDHLKXLESIASIHSQLEETLSRPXEAERLRRRAKYLERENSRLGMEV
KDPRKQVTVLVMQVEAARAGQPPPVIPEXEKEFPTGAGEVISWRLAVAFRNVAELQEQNT
HLRTSLRELSQQMEAVEKEGFIENRTQDLQEELDAAKAQLSELQAARERQESLMENIVNQ
RNIYRTLLSQQSPQTKAPSTAXPSQSSDVSXEELKESEKAELENSKKELATLKKEHEEYR
EEKIKNDKLLQDEYENLRANMGGRQGNVKLISQAEYNDRRIKTQQNNAEVLQRQIMALEK
NNSTLQGIIGRHESTIETLRNELLTLQKKLSCAEVTLENLREERMLLKESEARLLSERES
YERNQASQAMVLANLETIKINLERSDATEKMRYENQIHELTEQCSRLKAKLESNIEVKEA
TMKLTDAENRIKSMHQEHAAMTKQLLEVKSELSATKTRLAEAQDKMRSAPSPQGNKARGS
SPVASSPFRLAGSSPQIRDLQVQLTEERASVATLQASLDQSKRNIDELMGVTKQQEKQLA
ESNEACKIAQGQLSKLEKEKNEVEEKLAKSETQLNEAVEEAEAVKTLLQTQLAKMQDELQ
AAQKKLSDANEALTTAKGEEEKAKKEAQQKTQLAGEVQDKYEREVMLHGADLKALAALKE
KQAEYNAELQQITMAKLKAEEAVRDTRLGFEERENLLRRENKDLLMRSHELEEQNKALLD
QFTQLSDKMAALQTKLSVPGADNPNASFTEDEARSSDQLREVIKYLRRERDVAAGKCEVA
LAEVQRLTAQKKILESQIEQATKNLSEEREKSQASLDSAGRYGELLRKVHTMDALADSNR
LLREEKEGMQNTITEFKAKYESLEKQIEPLQEKQRLSDNKIESLMLEKRSIENEKDLYKK
RTQELVEKLNRAKPEDFIKLQQEVVEQQKTLQSKEAEVSRLKNQLAQLSKNQQMIVNQKN
QFQQQLNIVRTELHKTTEEFKRLTMEKNRMQAQNGEEFKRVNIEKARLQQQLVATQERVR
SLETSSQHAQTTHQQEMSKAQEQRNREQQQERQQIMDLKQREDALKSQLDATRKEAESLS
EKVKDAETKLADALKKADNFEKQALQLRKIATKYKKAAEGGSVTAASTTGDGSEEPASGG
TVVSAEKVKEYEETIASLRQKQDKAQEDANKLQQELTALKQTLSSKDSESNIIKTQSQQK
DSELTKLRSELETKSRELQVAQTVATQLKQNVTKQIADVTKRLDDKKQMYESRVSQLEKE
RDHLSREVEMVNKKLQIQQRQLENLQKQAAGTSKPSTSGVPSEKTGFEPPPTANIKPMNA
PVAPSASPRSQTATQVVPPSRAIPTASIRPMAPPSGGSAPPQGSTVVVVSPLETHSDGMV
SSTVTLPQATVTPTPAISAPTLLTTATTTPAATTMTSTLTATVSPTPASASLTTPVAPAV
ALPSTPSSQSTQPSASQSTLASQSSSVSQSSAIAESTPASQPTSSGPTVQMSKSSGHLQT
AAAASSTGTAQSTLASQSSSGSQSGTASTSIVVPIVSAVPVSPAQHARQDTQDVSADALV
SQAIALVSPLSSQEVAGPSSAGSAKRKLEPTEATTKEAKRACVEEDEAGPSSSHGGQENE
EEQSVTPEDHDTVVVDSDGEEPDQEYMDQGEDDDDDEDDDDDDDDDDDDEAIEDEDQMDD
DEDIRVIEDNEDDMERDEGSRGFSVGNNQEGREANEDMRSADAEAEAASESSAHVEESNN
ESPDAPSESQRPQPSGGSSQPSSSGQNEGPSQTSPGVPLSLPRPVRQERPVGRQNLAPFS
QLPHYEEGGDDSIVPSTPTLFVPRRGDGFSEAVSSPQVPSGGFVFGSNAEVANPPQTSGL
AQMAEGGLIDDTRIDLGLDEGNRSQPTTPLRRSPTAELGVEGGVSTSEGESTREPPTVLV
TGGEQSSGETSRDCEDNFTEADSMAVDIGDDNEVEEEEEDEDEDVEEGEHDDVIDVEGDD
DGNEEEESQGGEAEEREGSSEMEQPSADVSSAPSSTPSSPSNPARRITPITWDNSPQRMR
ADRGRGFMGMPGGRGLLRGRGFPPSMRGAPLLRGPQRARRSRPGSFSRGGM
NT seq
7176 nt
NT seq
+upstream
nt +downstream
nt
atggctggtagcctggagtcgagaaataaaagaatacaagaactacaagaacaggtggaa
aagcttgaggaacaattgacagtagtaacacgagcaaaatgtgaagctgtcataagggct
gaagaagctgggagcagggagttacacctgcagtacaaagagaagagactagagcaagaa
cgtagtctcttgacacgccaggtggatcgccttcaacagcagttagaacagagagtggag
gagagtgttaaccaacgaagggagcattcgactactattcttagattacagacagatctc
aaccataaattagaagagttacgagtggagagagaggaaaatgagagggtacaaaagggc
ttagaagagaaatcacaaaggattgaagaacttttgtccgccttgaatgcctccagagaa
tcagaaatgaaattagatgaaacttaccgccaagagcttgtggcacagaagaaacttgcc
gacatttatcaaggttcctgccaggatgagaaagagcgttgcactgagttggagaaggca
gtggaagaattacgcaaactcttacaagaggccagtgagcaatatggatgtttagagcgt
gccaagaaggcggcagaggaagaaagtgcagaagctcttcagcagtcaaatttgcttgtc
aaagaactgaaggaagaactagataaagtgaatctgttaatggaagctagctctaaaaag
gatctaggaggtctagaagacttatcacctgctgcaaaatgctgcccaagtcaactggtt
agtcgaggccttagtctgngccagctgtactcagagtatatgagtgtgtctgagaaacat
agtggcacagaggaagaaaacaagagactggctgattatgtagaccagatcttgcaggaa
agtgaggatcgagttcctgtatttaagaaacagagagatgatcacctgaagntgctagaa
agtattgcttccatacattctcagttggaggaaactttaagcagaccttgagaagcagag
aggcttcggcgtagagcaaaataccttgaaagagagaattcccgcctgggaatggaagtg
aaagatcccagaaagcaggtcactgtattggttatgcaggtagaagcggctagagcaggg
caacctccaccagtgattcctgagtaagaaaaagaatttcctactggagcaggtgaggtt
atctcctggcgattagcagttgcatttagaaatgttgcagaactgcaagaacaaaacact
catctgaggacttcattaagagaattgtctcaacagatggaggctgttgaaaaggagggc
tttattgaaaacagaactcaagatttacaggaggagttagatgccgctaaagcacaattg
tcagaattgcaagcagctcgtgaaagacaagaatcgctaatggaaaatattgttaatcag
cgcaacatctaccgcactcttctgtctcaacagtccccacagactaaagcaccatcaaca
gcctagccttcccagtcttcagatgtttctntagaggaattaaaagaaagtgaaaaggca
gaacttgaaaattcaaagaaagaattggcaacattgaagaaggagcatgaagaataccgt
gaagaaaaaataaagaatgataagttactgcaggatgaatatgagaacctaagggctaac
atgggaggaagacaagggaatgtcaaactgatatcccaagctgaatacaatgatagaagg
attaaaacgcagcaaaataatgctgaagttctccagaggcagatcatggcactggagaaa
aataattcaacactgcaaggcattattggacgccatgagagcacaatagaaactctacgt
aatgagcttctgacactgcagaagaaactgtcttgtgctgaagtcacacttgaaaatctg
agggaggagagaatgctgttgaaggaatctgaagcacggttgttgtcagagagggagtct
tatgaaagaaatcaagcatctcaggctatggtccttgctaacttagagaccattaagatc
aatttggaaagaagtgatgcaacagagaagatgcgatatgaaaaccagattcatgagcta
acagaacagtgcagccgtttgaaggccaagttggagtcaaacattgaggtcaaggaagcc
actatgaagctgacagatgcagagaatcgcatcaagtccatgcatcaagaacatgctgct
atgacaaaacaacttttggaagtgaagtctgagttgtctgccacaaagactcgattagca
gaagcacaagacaaaatgagatctgctccatctcctcaaggaaataaagcaagaggaagc
agtcctgttgcatcatctccattccgcttggctggatcatcaccccagattcgtgacctg
caagtgcagttgactgaagagagggcatcagttgcaacactccaagcttctcttgatcag
tcaaaacgcaatattgatgagctcatgggggtcaccaagcagcaggaaaaacaattggct
gagtcaaatgaagcctgcaagattgcgcagggacagctttccaaacttgaaaaggaaaag
aatgaagtggaagagaaactggcaaagagtgagactcagcttaatgaagcagttgaagaa
gcagaagctgtaaagactcttcttcagacccagcttgcaaagatgcaagatgagttgcaa
gcagctcagaagaagttgagcgatgcaaatgaagctctaacaacagctaaaggagaagaa
gaaaaggctaagaaggaagctcaacaaaagacacagcttgctggagaagtacaagataag
tatgagagggaggtgatgttacatggtgccgatttgaaggctttagctgcgttgaaggaa
aagcaagctgagtacaatgcagaacttcagcaaatcaccatggcgaagctgaaggcagaa
gaagctgtcagagacacccgattaggatttgaggagagagaaaatctgcttcgtcgtgaa
aacaaagacctgctaatgaggagccatgagcttgaggaacagaacaaggctcttcttgat
cagtttacccagctgtctgacaagatggctgcattgcagactaagctgtctgtgcctggg
gctgataatcccaatgcctccttcactgaggatgaggctagatcctcagatcaattacga
gaagtcatcaaataccttcgaagggagcgagatgtagctgctggaaagtgtgaggttgct
ttggctgaggtacagagactgactgcacaaaagaaaatcctggagtcacagatagaacaa
gctacaaagaacttgtcagaagaaagagaaaagagccaagcctcactagatagtgctgga
cgatatggtgaacttcttaggaaggtccacacaatggatgctctggctgacagtaaccga
ctccttcgtgaagagaaagaagggatgcaaaacaccatcactgaattcaaggcaaaatat
gaatctttggaaaagcagattgaaccgctacaggagaaacaaaggctttctgacaataag
attgagtctttgatgctggaaaagaggagcattgaaaatgagaaggacctttacaagaag
agaacacaagagttagtggagaaacttaaccgtgccaaacctgaggactttattaaactt
cagcaggaagtggttgaacagcagaagaccttacagagcaaggaggcggaagtgtcaaga
ttaaagaaccagctggctcagttgtccaagaaccagcagatgattgtgaaccagaagaat
caattccagcagcagctgaatattgtgcgaacagagcttcacaagaccacagaagaattc
aaaaggcttacaatggagaaaaaccgcatgcaggctcagaatggtgaagagttcaagagg
gtaaacattgaaaaggctcgccttcagcaacagctagtggcaactcaagaacgtgtgcgc
agtttggaaacatcttcacaacatgcacaaactactcatcagcaggagatgagcaaggct
caggaacagcgcaatagggagcaacaacaggagaggcaacagattatggaccttaaacag
cgagaggatgctctcaaaagtcaacttgatgctaccagaaaggaagctgaaagcctttct
gagaaagtcaaagatgctgagacaaaattagctgatgctctgaagaaggctgataatttt
gagaaacaggctctccagttgcgtaagattgccaccaaatataagaaggctgctgaagga
ggttcagtgactgctgcaagtactactggggatggtagtgaagaacctgctagtggaggg
acggtggtttcagctgagaaagtaaaggagtatgaagaaaccattgccagccttcgccag
aaacaggataaagcacaggaagatgctaacaagctgcaacaagaattgacagcattaaag
cagactctttccagtaaagattcagaaagtaatataatcaagacacagagtcaacagaag
gatagtgaactaacaaagttgcgcagtgaactagaaactaaatcaagggagttgcaagtt
gcacagactgtcgcaacacaactcaagcagaatgtgactaagcaaattgctgatgttact
aagcgtttagatgacaaaaaacaaatgtatgaaagccgtgttagtcagctggagaaggaa
cgtgaccatttatcccgcgaggtggaaatggtcaataagaagttgcagattcagcaaagg
caacttgagaaccttcagaaacaggcagctgggacctctaaaccatcaacaagtggagta
ccttcagaaaaaacaggctttgagcctcctccaacagccaacataaaacctatgaatgcc
ccggttgccccttcagcctcaccaaggtcccagactgcaacccaagtcgttccaccatcc
cgggccattcccactgccagtattcgacctatggctcctccatctggaggctctgctcct
ccccagggatcaacagtggttgttgtatcgcctctagaaactcatagtgatggtatggtt
tcttctactgtgactctcccccaggccacagttactccaactcctgccatttctgcacca
acattgctgacaacagccactacaactcctgctgccaccacaatgactagcacattaact
gctactgtatcacctactccagcctctgcctctctaaccactccagtggctccagctgtt
gccctaccatccacaccttcctcccagtcaacacagccatctgcttcacagtccactttg
gccagtcaatcatcttcagtatcacagtcatctgcaattgcagaatcaactccagcctct
cagcctacatctagtgggccaactgttcagatgtccaagtcatcaggtcatctccagaca
gctgccgctgcctcatcaacaggaactgctcagtcaaccctggcaagtcagtcttcatca
ggtagtcagtcaggaacagccagcacttctattgtagtgccaattgtatctgcagtgcca
gtatctcctgcacaacatgctaggcaggacactcaagatgtatcagctgatgctttggtc
tcacaagctattgcccttgtatcaccgttgagttcacaggaagttgcaggaccctccagt
gctggttctgcaaagagaaaactagagccaacagaagcaacaactaaagaagcaaagaga
gcatgtgtagaggaggatgaagctggtccttcatcctcacatggaggacaggaaaatgag
gaggagcaaagtgttactcctgaagatcatgatactgttgttgtagactcagatggtgaa
gagcctgaccaagagtacatggatcaaggggaagatgatgatgatgatgaagatgatgat
gatgatgatgatgatgatgatgatgatgaagcaattgaagatgaagatcaaatggatgat
gatgaagatatcagagtcattgaagacaatgaagatgacatggaaagggatgaaggaagt
cgtggtttcagtgtaggaaataatcaagaaggcagggaggctaatgaggatatgagaagt
gctgatgcagaagctgaagctgcttcagaatcatctgcacatgttgaagaatcaaacaat
gaatccccagatgccccaagtgagagccagagacctcagccatctggtggatcaagtcag
ccgtcttcatcaggtcaaaatgagggaccctctcagactagcccaggagtgccacttagc
ctccccaggcctgttcggcaagaaagaccagttggccgtcagaacttggcacctttcagt
cagcttcctcactatgaagagggtggtgatgacagcattgtaccatcaacaccaactctg
tttgtcccaaggcgtggagatgggttctctgaagcagtaagctctccccaggttccatct
ggtggatttgtgtttggctctaatgcagaagttgcaaacccacctcagacaagtggattg
gctcagatggcagagggaggtttaatagatgacacgcgcattgatttgggtcttgatgaa
ggaaatagatctcagcccaccaccccgctaaggagatctcctacagctgaacttggagtc
gaaggtggagtgagtactagtgagggagaatcaacacgtgaaccaccaacagttctagta
acaggaggtgaacagtccagtggggaaacatcacgtgattgtgaagacaacttcacagag
gcagattccatggctgttgacattggagatgacaatgaagtagaagaagaagaagaagat
gaggatgaggatgtggaggaaggagagcatgatgacgtgattgatgtggagggtgatgat
gatggaaatgaggaagaagagagccagggaggtgaagctgaggagagagaaggaagcagt
gaaatggagcaaccatctgctgatgtatcgagtgccccttcatccactccaagttccccc
tccaatccagctcgaagaattacgccaatcacatgggataactccccacagagaatgcga
gcagatagaggccgtggcttcatgggtatgccaggaggaagaggccttctgaggggtaga
ggattcccccccagcatgagaggcgctcccctgttgcgcggaccccagcgggcaaggcga
tcgcgtcctgggtccttttcaagaggaggaatgtaa
DBGET
integrated database retrieval system
