Penaeus vannamei (Pacific white shrimp): 113821474
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Entry
113821474 CDS
T06111
Name
(RefSeq) BLOC-2 complex member HPS3 isoform X1
KO
K20190
Hermansky-Pudlak syndrome 3 protein
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvm04131
]
113821474
Membrane trafficking [BR:
pvm04131
]
Endosome - Lysosome transport
Others
BLOC-2 complex
113821474
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HPS3_N
HPS3_C
Motif
Other DBs
NCBI-GeneID:
113821474
NCBI-ProteinID:
XP_027229784
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All DBs
Position
4:complement(15645566..15662469)
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AA seq
1130 aa
AA seq
DB search
MDQHSFQMSNCRRMVRVISVHHFTRQDVAGLEHAGGRGVSRGKFDILLVGGEHKVDVRDL
KLGGVLNGSFPTVDLVQQLAYCETGNYVCTLETKPARHGGDHRYVRVYLNWDQDNTNQPM
RARIAGRVTPSSQSGVANLEMVEIPLRKPAEYIACCQSTGNIAVSCGISVTIFRFCHKTH
DISKLKFIDFEELIELDMSFIVKEVAISEDLIGCVSESEAHIFQVTINSHLLKASSEEKE
TKPQEKRSKSRSKSKTRSASRSPGRSIDSLSSSSRLRGKRSSPKEESMSVIRNSEDYVDL
SELTWVPTLSYGRKKPSEDQRILLFPSLVGAAHCGPLAEPGEIIGPINSSRCSNVRVKLV
SGSSAQKVPQNVFEAVTLIHRRADHNNDPDIPFSNLKVMAVYDAEAGKKGGASTPRRASH
PLLPQGSARKVGASIFLTTPHVGQLYHVTLSDDPFGHSVVRGGVFSYTAPVYSVALEPSL
LHALTLTGLETYTLRPHPHVVVSHLPEDLNMIVPPHWEETVCLVGLRPFLNVESLTLTDS
CLALIAANNEGGDKSHTVYSLHLPSAASLYKEMVRVGRSHRSASPSTYLHLLLEAHLVLT
TALQHEVPTEDEAEEDLYSLLQDSSALLGDYYAQCENEAEWRQATQYYQVSSLSPDAVIE
RLELTCPGLVAVISSLLLHPNTPSLTAAQANCVLEMLEKIAPEKVSTIILKSTCFTEYKK
DKVLSIIKQELSKTNEPRPTDVLALALVFLDRGSPEQVSTVLASLRAYQLVVALLQHSRL
LFTVEDGSTRLSPLAQVLAEHKKEVFTEVFVSLIGEGSLTLNAFVDAFIAVYPIMSCGPE
CNTHSLRLRDFLEKFFLEYAHNAEITDQRERYDRAITVLVSLYLASLMGAFGDKTKEDPN
WCDQRAALKELYAPRPVFLNLLPPFNVQKKIEKEESQSDKPEGQSSPGQEEEEEEEEGSG
NLSSSSLHLVVLQSLLSSDLPSAEDRNNVLKFVTSNPEALGAQSLRILCLDPQKQLEYIL
SEFPPVLLQYGKDMYESAAEWEELVYKLINHKSSLCESDPSYSVYSDVLNDVLSELVMTA
PLDVFIRIIPKNRHEELRGHIRQCHSAALALHLRSSLISYAHNVLMQMSK
NT seq
3393 nt
NT seq
+upstream
nt +downstream
nt
atggatcagcactcgtttcagatgtcgaattgcaggaggatggtgcgcgttatttccgtg
caccacttcacacgacaggatgtggcaggacttgagcatgcagggggaagaggtgtcagt
cgaggaaagtttgacatcctgctggtgggaggagaacacaaggtggatgttcgagacctg
aagctaggtggagtcctcaatggaagcttcccgacagtggatcttgttcaacagctggct
tactgtgaaacaggaaattatgtgtgtaccttggagaccaagccagctcgacatggggga
gaccacaggtatgtgagggtgtacctgaattgggatcaggacaacacaaatcagccaatg
agggctcgtattgctggccgtgtcactcctagcagccagtctggggttgctaacttggag
atggtggaaatacccctacgtaaaccggcagaatacattgcttgttgccagtcaacaggc
aacattgctgtttcatgtggaataagtgtgaccatcttcaggttctgccacaagacccat
gatatctccaaattgaaattcattgacttcgaagagctcatcgagctggacatgtctttc
attgtcaaagaagtagccatatcggaagatctgattggctgcgtctcagaatcagaagca
catatatttcaggtgacaataaactcacatcttctcaaggcatcctcagaggagaaggag
actaagccacaggaaaagaggagcaagtcccgctctaagtctaagacgcgatcggcctct
cggtccccaggaagaagcattgactctctcagttcaagcagcagactgaggggtaagcgc
tccagtccaaaagaggaatctatgagtgtcatccgcaattcagaggactatgtagacctc
agtgaactgacctgggtcccaacattgtcctatggccgcaagaagccctctgaggaccag
cgcatcttgctctttccatcacttgtgggggccgcacactgtgggcctttggctgagcca
ggcgagatcatcggcccaatcaattcttcacgttgctctaacgttagggtgaagttagtg
agtggaagttcagctcagaaggtgcctcagaatgtctttgaagccgtgacactcattcat
cgccgagcagatcacaataatgatccagacattccattttccaacctgaaggtcatggct
gtttatgatgctgaggcaggaaagaaaggtggtgcttctactccaagacgagcatcacat
cccttgctccctcaaggctcagccagaaaagtaggggcttctattttcctgacaacacct
catgtgggccagctttatcatgtcacgctgtctgatgatccctttgggcacagtgtagtc
cgtggtggagtattttcatacacagcgcctgtctactctgtggccttggaaccatcgctc
ttgcatgcgcttacactcactggccttgaaacatacacattaaggcctcatccacatgtc
gttgtctctcatttacctgaggatctgaatatgattgttcctccacactgggaagagaca
gtgtgtctagtgggtctacgacctttccttaacgttgaaagcttgaccttgaccgattcc
tgtcttgcactcattgctgcaaataatgaaggtggagacaaatcccacactgtttactca
cttcacctcccgagtgccgccagcctctacaaagagatggtgcgagttggacgtagccat
aggtctgcctccccctctacctacctgcacctgctccttgaggctcacctagtccttacc
accgccctccagcatgaagtgccaacagaggatgaggcagaggaggacctgtactctctc
ttacaggattcatctgcattattgggagattattatgcccaatgtgagaatgaagcagag
tggcgtcaagcaacacagtattaccaggtatccagcctgagtccagatgcagtgattgag
agactcgaactcacctgccctggtttggttgccgttatctcctctctcttgctacaccct
aatactccatcattaacagctgcacaggctaattgtgtgctggaaatgctggagaaaata
gcaccagagaaagtttcaactattattctcaagtctacatgctttacagagtacaagaaa
gataaggtgctaagcataatcaagcaagagttatccaagacaaatgagccacgacctacg
gatgtgctagctcttgccctcgtctttttggacaggggatctcctgaacaggtctcaact
gttttagcttcactaagagcctatcagcttgttgtggctttgctgcaacactcacgtctt
ctattcacagttgaggatggatcaaccaggctctcacctttagcacaagttttagcagag
cacaagaaagaagttttcaccgaagtatttgtgtctctcattggtgaagggtcactcact
cttaatgcctttgttgatgcattcatagctgtttatcccattatgtcatgtgggccagag
tgtaacacccattctcttcggctgcgagatttccttgaaaagttcttcttggagtatgca
cataatgctgaaattacagatcagagggagagatatgacagggctatcacagtccttgtt
agcctctatctagccagcttgatgggtgctttcggtgataaaaccaaggaagaccccaac
tggtgtgaccaacgtgctgcattgaaggaactctatgctcctcgaccagtcttcctcaat
ctgttgccaccattcaatgtgcaaaagaaaatagagaaggaggagagccagagtgataaa
ccagaagggcagtcaagcccaggacaggaagaggaggaggaagaggaagaaggaagtggc
aacctttcttcttcttctttgcatcttgttgttctccagtctctgctgagttcagatttg
ccatctgctgaagatcgtaacaatgtcctcaagtttgtgacatcgaaccctgaggctctg
ggagcccagtctctccggattctgtgcctcgacccacagaagcagctggagtatatactc
agtgaatttcctccagtgcttcttcagtatggaaaggatatgtatgaatcagcagccgaa
tgggaggaattagtttataagctgatcaaccacaaatcaagcttgtgtgaatcagaccca
tcttattcagtgtattctgatgttttgaatgatgttctgagtgagctggtgatgactgca
cctcttgatgtcttcatacgcataatccccaagaatcgccatgaagaactgcgtggtcac
atccggcaatgccattcagccgccttggcactccacttgcgctcttcgctaatttcttat
gcccacaatgtattaatgcaaatgtcaaagtga
DBGET
integrated database retrieval system
