Penaeus vannamei (Pacific white shrimp): 113821590
Help
Entry
113821590 CDS
T06111
Symbol
LysRS
Name
(RefSeq) lysine--tRNA ligase isoform X1
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Pathway
pvm00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
113821590 (LysRS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pvm01007
]
113821590 (LysRS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pvm03016
]
113821590 (LysRS)
Enzymes [BR:
pvm01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
113821590 (LysRS)
Amino acid related enzymes [BR:
pvm01007
]
Aminoacyl-tRNA synthetase
Class II (A)
113821590 (LysRS)
Transfer RNA biogenesis [BR:
pvm03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
113821590 (LysRS)
Prokaryotic type
Other AARSs
113821590 (LysRS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
MAS20
tRNA_anti-like
Motif
Other DBs
NCBI-GeneID:
113821590
NCBI-ProteinID:
XP_027229902
LinkDB
All DBs
Position
30:complement(11149448..11160050)
Genome browser
AA seq
610 aa
AA seq
DB search
MIRMLRCLLQTAAFQGARVLETRGNRLLTLSGCSAYCQPYCSYSSRSELKRRLKAEKKAQ
EKAEKEANKGATQADQAAKPKKVNEEEISPNEYLKLRTQYVQQLKNEGKPVYPHKFHVST
SLTLFLEKYSSLGENEEGKEEVTVAGRVHAIRESSQKLRFYDLRGEGVKLQVMANLKFYE
SEESFMDDCNKIRRGDIIGVKGIGLRTKTGELSIRPSKIEILSPCLHMLPHLHFGIKDQE
TRYRQRYLDLIINSDIRKKFVVRANIISYIRKFFDDLGFLEVETPMMNMIAGGATAKPFI
THHNDLDMDLYLRVAPELFLKMLIVGGIDRVYEIGKQFRNESIDLTHNPEFTTCEFYMAY
ADYNDLIELTEKLVSGMVHSIFGSYKVKFQPQGPEGEEWEIDFKPPYRRIHMFPGLEKEL
NAKLPAPDQLNSEEARKTLSDLCEKHGVECPPPRTAARLLDKLVGEFLEEKCIHPTFIMD
HPQVMSPLAKYHRSVKGLTERFELFVAKKEICNAYTELNDPLDQRARFAQQAQDKAAGDD
EAQMIDENFCTALEYGLPPTGGWGMGIDRLAMFLTNSYNIKEVLFFPAMKPEDQHKKQTE
EANKENQPSS
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgataaggatgttgaggtgcttactacaaacagcggccttccagggtgcccgagttttg
gagactcgggggaacagactcttaactctgtcaggctgttcggcatattgccagccctac
tgctcatattcatcccgcagtgaactgaaaaggagactgaaggctgagaagaaggcacaa
gagaaagcagaaaaagaagcaaataagggtgcaactcaggctgaccaggctgcaaaaccc
aagaaggtgaatgaggaagaaattagtcccaatgaatacctcaaactgaggacccagtat
gttcagcagttgaaaaatgaaggtaaaccagtgtatcctcacaagttccatgtgtctacc
tcactcacactgttcctggagaaatacagttcactgggagaaaatgaggagggaaaggag
gaagttactgtggctggcagggtccatgccattcgagagagcagccagaagttgcgcttc
tatgacctcagaggggaaggagtaaagttacaggtaatggcaaatctgaaattctatgaa
agtgaggagagtttcatggatgattgcaataagatccgtcgaggagacatcattggagtg
aagggcattggactgcggaccaagactggagaattgtctatccgtccatccaagattgaa
atcctctctccatgtcttcacatgcttccacatctccactttggtattaaggaccaggaa
acaaggtacagacagagatatcttgaccttattatcaattcagacatccgcaagaagttt
gttgtcagagctaatataatctcatacattcgcaagttctttgatgacttgggtttcttg
gaggttgaaacgccaatgatgaacatgattgctgggggcgccacagcaaagcccttcatc
acacaccataatgacttggacatggacctctacctgcgagtagcccctgaactgttcctc
aagatgcttattgttggaggtattgacagagtatatgaaattgggaaacagtttaggaat
gaaagcattgatctcacacacaacccagagttcacaacttgtgaattctatatggcgtat
gcagactataatgacttgattgagcttacagaaaagttggtgtcagggatggttcatagc
atttttgggtcatacaaagtgaaattccagccacaaggaccagaaggtgaagaatgggaa
attgattttaaacctccctaccgaagaattcacatgttcccaggtcttgagaaggagctc
aatgcaaaacttccagccccagatcagcttaattcagaggaggcacgcaaaactttaagt
gacttgtgtgagaagcatggtgtagagtgccctcctcctcgcactgctgcacgattatta
gacaagttagttggtgaatttttggaagaaaaatgtattcacccaacctttatcatggat
catccccaagtaatgagtccccttgccaaatatcaccgttcagtcaagggacttacagag
aggtttgagctctttgtggccaagaaggaaatctgcaatgcatacactgagctcaatgac
ccacttgaccagagagccagatttgcacagcaagcacaggataaggcagctggagatgat
gaggcacaaatgattgatgagaacttctgcactgccttggaatatggcctcccgcctaca
ggtggctggggcatgggcattgaccgcctggccatgttcttaactaactcatacaatatc
aaggaagtcctcttcttcccagcaatgaagcctgaagaccaacacaagaagcaaactgaa
gaggcgaacaaggagaaccagccatcgtcctaa
DBGET
integrated database retrieval system
