Penaeus vannamei (Pacific white shrimp): 113821594
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Entry
113821594 CDS
T06111
Symbol
Rox8
Name
(RefSeq) nucleolysin TIAR isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvm03019
]
113821594 (Rox8)
03041 Spliceosome [BR:
pvm03041
]
113821594 (Rox8)
Messenger RNA biogenesis [BR:
pvm03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
113821594 (Rox8)
Spliceosome [BR:
pvm03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
113821594 (Rox8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_5
RRM_occluded
RRM_PARP14_3
RRM_3
RRM_Nup35
Nup35_RRM_2
Zn_ribbon_LysW
Motif
Other DBs
NCBI-GeneID:
113821594
NCBI-ProteinID:
XP_069999116
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All DBs
Position
30:complement(11113557..11126117)
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AA seq
459 aa
AA seq
DB search
MGEEIFVSHKGKRCNLEPFSQSGSNARRGMAAAAELAGNSAYGTADSHDKETRRAVTSRE
MEREVACPMPWRDTIPDAPSSHSDSTMAHSEQNRTLYVGNLDSSVTEELIMMLFGQLGEV
RSCKMFREPTTDPYCFVEFNDHMTALNAITMMNDKMLQTRKMRVDWATGQGNKNKYTKVD
TSRHHHVYVGDLSPEIDEQALREAFQVFGEISDCKVVKDPQSFKSRGYGFVVFVKKMDAE
TSISAMNGQWLGRKMIKTRWATRKPANTPNENKPEQKKLNYEEVYNQTTPTNTTVFCGGL
KQDISEEMLHKSFQPHGQIEKIKIFKEKGYAFIKYTTKESACQAIVELHNSNLNGQIIRC
SWGKDTGADQATNPAQEANGAQPSLTNYSNGQGFTNQMGQMGYWQYYPQQMPYNQMGYNQ
YPYGYQPNPSYMWMGWGQQGWGQPGQQPPPAPQQGQPQQ
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgggtgaggagatttttgtttctcacaagggaaaaagatgcaatttggaaccattctct
cagtccggttctaacgctcggcgaggaatggcggctgcagctgagctagctggcaattct
gcctacggcacagctgacagccacgacaaagagacaaggcgggcagtcacttcgagagag
atggagcgagaggttgcatgtcccatgccttggcgcgacaccatccctgatgcgccctca
tcacacagtgacagcaccatggcacactcagagcagaacaggacgttgtacgtgggcaac
ctggacagttcggtcaccgaggagctcatcatgatgctgtttggccagctgggtgaggtc
cgcagttgcaagatgttccgcgagcccaccactgacccctattgctttgtagaattcaat
gatcacatgactgcactcaatgcaattacaatgatgaatgataaaatgctgcagactcga
aagatgcgagttgattgggcaactggccagggaaacaagaacaagtacaccaaggtagac
accagtaggcatcatcacgtatatgttggagatctcagcccagaaatagacgagcaagcg
cttagagaagcttttcaagtgttcggtgaaatttcagactgcaaggtggttaaggatccc
cagagcttcaagtctcgaggttatggttttgttgtgtttgtgaagaagatggatgcagag
acaagtatcagtgcaatgaacggccagtggcttggccgaaaaatgatcaaaacacgctgg
gctacaagaaaacctgccaacactccaaatgaaaataaacctgagcagaagaagttgaat
tatgaagaagtttataaccagacaacaccaacaaataccactgttttttgtggcggcttg
aaacaagatatttcggaagagatgttacataaatccttccagcctcatggccaaattgaa
aagataaagatttttaaagaaaaaggttatgcttttataaagtacacaactaaagaaagt
gcttgccaggctattgttgaattgcataattcaaacttgaatggacagataattaggtgc
tcctggggcaaggacactggggctgaccaggccaccaacccagctcaggaggccaatggg
gctcaaccgagcctcacaaactactctaatggccaaggattcaccaaccaaatgggacag
atgggctattggcaatattatccgcagcagatgccttacaaccagatgggttacaaccag
tacccatatggttaccagcctaatcctagctacatgtggatgggttggggccagcagggc
tggggacaacctgggcagcagccccccccagcacctcagcagggccagccccaacagtga
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