Penaeus vannamei (Pacific white shrimp): 113821648
Help
Entry
113821648 CDS
T06111
Symbol
kat80
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1
KO
K18643
katanin p80 WD40 repeat-containing subunit B1
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pvm04812
]
113821648 (kat80)
Cytoskeleton proteins [BR:
pvm04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
113821648 (kat80)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
WD40
Beta-prop_WDR5
Beta-prop_THOC3
WD40_Prp19
Katanin_con80
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR3_2nd
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
WDR55
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WD40_MABP1-WDR62_1st
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_DCAF4
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_SPT8
NBCH_WD40
Beta-prop_SCAP
Beta-prop_EIPR1
Beta-prop_Aladin
eIF2A
Beta-prop_IFT122_1st
Beta-prop_WDR41
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
Beta-prop_Vps41
WD40_RFWD3
WDR90_beta-prop_4th
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_ACSF4
RMC1_N
Tricorn_2nd
Beta-prop_WDR75_2nd
Beta-prop_IP5PC_F
MIOS_WD40
Beta-prop_LRRK2
Motif
Other DBs
NCBI-GeneID:
113821648
NCBI-ProteinID:
XP_069977986
LinkDB
All DBs
Position
5:complement(11398842..11497856)
Genome browser
AA seq
898 aa
AA seq
DB search
MDRRSRSPMKKPEIKRRPLSITRRRRTSVDEGRQVTHARKEFVAHGANVNCLALGHKSGR
VLVTGGDDKKVNLWAVGKPNCILSLSGHTTPVECVRFGGSEELVCAGSLSGALKIWDLEA
TKIVRTLTGHKANIRCIDFHPYGDFIGTGSLDTNIKLWDIRRKGCIFTYKGHNLTVNSLK
FSPDGQWIASAGEDCNVKLWDLRAGKMMTEFAQHTGPVSDVEFHPHEFLLASASHDRTVN
FWDLEKFSLVSSTDADTGPIRTIAFHPDGDCLYAGSPDILKVYGWEPARTFDTVAMGWGK
IQDIAIAQNQLIGAGFHGVHVSLYVVDLKRVQPFGGPQQDVPSTFRHGAAIRKSFIKDKN
SGKATAESMKTEEASDTGGEEPQEEDPPPEITNLNDYNSIFQTRRELQRTPPLPEPKPPI
NNNNDPMVPQVMTSPDVIRPEPLRAMPIPTTKPSTPDSTRRGSSHTVSHLPRPIPTPREI
ITPRYDNGNQPQTPPSHSTSFPSLYERRGSSQEQSSYVSPHRDYSLSGNASPNLSQPYRA
RAVSESRRDSREPSSSSHEAEGNRYAIRHSPSEPYLVRQSSSPGPPVSSPAYHDSAPHLP
QLPRPDLTNLNRTQASSKPDLTSHSKPMDRPALVKPTSRVHGPQSPDVSYLNTPKNTSPD
ISYMGTPKEPPDYGYSQDKMNDIEYSSSYSTDNGTINFEDFLPNKLSGLGFGSNGVTGIA
GNEMSEQEVLSSIMRGHSSMMSVISARTRGLQVTHKLWQTKDLKTAVDHALNSGDQALLV
DLLGIINLRPSIWNLDLLTALLPPVSLLLQSKYEMYVTCGYNALKLMIKNFAVMIKSNMS
GPIHSVGVDISREERYNKCIECYNHMMSIRAFLLKRQTVPGKLGPMYRELVILMQAFE
NT seq
2697 nt
NT seq
+upstream
nt +downstream
nt
atggatcgtcgctcgagatcgcccatgaaaaagccggaaattaaacggcgtccgctgagc
atcacgcgccgccgccgcacctcggtggacgagggccgccaggtcacacacgctcgcaaa
gagttcgttgcgcacggagccaatgtgaactgcctggcgttgggtcacaagtccggccgg
gttctggtcaccggcggagacgacaagaaggtcaacctatgggcggtgggcaaacccaac
tgtatcctgagtctgtcaggccacacaacaccagttgaatgtgtgcgttttggtggatcc
gaggaactggtgtgcgccgggtccctgagtggtgcgctgaagatatgggacctggaggcc
accaaaattgtccggacactgaccggacacaaagccaacatcagatgcatagatttccac
ccttatggggactttatcggcacgggttcccttgacacaaacattaagctgtgggacatt
agacgaaaaggttgcatcttcacatataaagggcacaacctaacagtcaatagcctgaag
ttttccccagatggccagtggatagcatctgctggagaagattgcaacgtgaagttgtgg
gatcttcgagctggcaaaatgatgacagaatttgcccaacacactgggcctgttagtgat
gtagaattccatcctcatgaattcctattagcctctgcatcacatgacagaactgtaaac
ttttgggatctagagaaattctctctagtctcatccacagatgctgatacaggacccatc
agaacaattgcctttcatcctgatggtgattgcctgtatgcaggatctcccgatattctc
aaggtgtatgggtgggagcctgcccgtacatttgacacagttgctatgggttggggcaag
attcaagatattgccattgcccaaaatcagcttattggtgcaggttttcatggtgtgcat
gtgtctctgtatgtggttgacctgaagcgggttcagcccttcggtgggccccagcaagat
gtcccatcaactttcagacatggtgcagctatacgcaagagttttatcaaggacaaaaac
tctggaaaggctacagcggaatccatgaagactgaagaagcctcagacacaggtggtgaa
gagccacaggaggaggacccacctccagagatcacaaacctaaatgattacaattcaatc
ttccagaccaggagagagttacagagaacaccacctcttcctgagcccaaacctcccatt
aacaataataatgatccaatggtacctcaagttatgaccagtccggatgtcattcgtcct
gagcctttgagagctatgccaataccaactacaaaaccttcaactcctgactcaacacga
agaggatcgtcacacactgtgtcgcatctgccgaggcctataccaaccccaagagaaatt
ataactcctagatatgacaatggtaaccagccacagactcctccctcacactccaccagt
tttccaagtctctatgagagacgtggatcctcccaggaacagtctagctacgtctccccc
cacagggattattcactaagtggaaatgcaagccctaacttgagtcaaccatacagagct
cgtgcagtatctgagagtagaagagattcaagagagccttccagttcttcacatgaagca
gaaggaaataggtatgctatcaggcacagcccatctgaaccttacctggtgagacagtcc
tcttcaccaggccctccagtctcatcaccagcataccatgattcagcaccacacttacca
cagcttcctcgaccagatcttacgaatcttaaccgaacacaagcttcatcgaaacctgac
cttacctctcattccaagcctatggatcggccagccttagtaaagcctacgtcaagggtt
catgggcctcagagccctgatgtgtcatacctaaacacccccaagaataccagtccagat
atatcatatatgggaacacccaaggaacctccagattatggctatagtcaagataaaatg
aatgacattgaatatagctcatcatactctacagataatggaactatcaactttgaggac
tttttaccaaataagctgagtggactagggtttggcagcaatggtgttactggtattgca
ggaaatgaaatgtcagaacaagaagttttatccagcattatgcgtggtcattcttccatg
atgtctgtcatatctgcacggacaagggggctacaagtcacacacaagctgtggcagaca
aaagacttgaaaactgctgtagatcatgcactaaactctggagatcaagcattgcttgtt
gatcttcttggaattattaacctcagaccgtcaatatggaacttggatcttttaacagcc
ttattaccacctgtaagtcttctgttgcagagtaaatatgaaatgtatgtaacctgtggt
tataatgctctgaagctcatgataaagaacttcgctgttatgatcaagtccaatatgtct
ggtccaatacattcagtaggagttgatatatcaagagaggaaaggtacaataagtgtata
gaatgctacaaccacatgatgtcaatccgagccttccttcttaaacggcaaactgttcca
gggaagttaggacctatgtatcgagagctagtaattttaatgcaggcatttgaataa
DBGET
integrated database retrieval system
