Penaeus vannamei (Pacific white shrimp): 113821649
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Entry
113821649 CDS
T06111
Name
(RefSeq) uncharacterized protein
KO
K17985
activating molecule in BECN1-regulated autophagy protein 1
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Pathway
pvm04137
Mitophagy - animal
pvm04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
113821649
04137 Mitophagy - animal
113821649
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvm04131
]
113821649
03029 Mitochondrial biogenesis [BR:
pvm03029
]
113821649
Membrane trafficking [BR:
pvm04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
113821649
Mitochondrial biogenesis [BR:
pvm03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
113821649
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_WDHD1_1st
WD40
Beta-prop_EML_2
WDR55
WD40_CDC20-Fz
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_EML
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
DUF2126
RasGAP
Motif
Other DBs
NCBI-GeneID:
113821649
NCBI-ProteinID:
XP_027229964
LinkDB
All DBs
Position
37:5678722..5707589
Genome browser
AA seq
1658 aa
AA seq
DB search
MSRAKSKVASTHGDHNIYVSEVKTGRCICTLEGHPRTPWCVAFHPASNEIIASGCLGGEV
RVWDLKGGSEVWTTEKNTVIASLAFHPTDQVLVIATFNEIYFWDWFQPHPFAKISTADEK
EKVRYVKFDPLGHKLITGIANTSHDRQSHGASRTSGCTNGSFPSHSELVEREQQLSHRYN
QLSSQYLNLMSRYEALTSRNFNNVPRTSSRIDRGTDPIDPPPTQGQQALLNQARQFARQV
TEERRATLQSQESTGEISRNRTTWGSQDLHSGRDSQATNDLNVRLEEDYGLSAVRTLRQI
ISDDSASSSSLDSSSSATSGTSGISERNTRLSLLWTSRLHRPGQDSDSAGEASSVQSLGD
NAVSGMGDLRAPMGGEEGVTGSRRGDNFVLDRRNYRRTDDRGSDEDDVTVGPVGPNLRST
GSQSERQGTLWGYFTSNGSVIQPGRSRVPRENRTETEIENSGNNTAENVIGSDEPENSQE
SAVQQSVENNGAPSSDPHILSQSTGTAPATRGTDPVRLGNTGEIPPSDANEDLAVPGPSG
LSGMPRSQMSSLSSATRYPRSSSLDPQFGVQLLSRHIENMQRICRAHLEITRHRHEILRL
QQIRSMLYDIQHQIHSLRVSVDQSMEDLNGPSADSPPTTSQRVGIPNEDDPSAQPPSLGP
SDNVSSLPLIRHWSRTSPRTVARLQRGPFGTRTRSRHSHRPWVMSPCMLRRIPRRRAVRT
RLTLPGLSASHHGASGALGGGLDRTTSPTRGLIEPGASASGTGAVIGPLPTPPPDQGDSE
EQPRDIVRIISGNQYGAHTRTHPQILHHSFERLQERLRERQEALEQQERRLQGFLNASSP
ASSTTSSVTSSASQDHEEDPPSPPEQYRRAGPPTTSLASRIANMIAHQVANGASTSTAGS
DHEGTNHQNETSDTSTTMNDRSATRALNRNAAGSSTRSPASSTRRPPHRSSDRPLSVPDR
PNVEPSSSSYDRLNERRSSGRSDGPYDRLSDRWSDLDNNGLPVRSCARQHGRNSERLSER
TMESASPWGGLPPSRRPVPPGPPPTVPPPLPQLDETEAQSNDLNNNSSPWHNARRRLRQD
IINARRDSVGRIPGNSGGPVRLPMAALRSRHITTERILLREGLRRERRDRYRQILQRMAD
RLNSLVNQEQEQQQQRQQERHQSSDSAEGEQDSSSSSMDNHMQNLRLLVRLALNLIYQLL
NFICNQNISYEERPISRLPNPFRDEELGAIGERQRGDLPPPMSLDLEPGLHNLTTLLETV
RMASEELRNDGVGGSAGEPAPPQDSTRPITNVPRRLTDFLRRSGNLARQQDQNSRQSGWS
GSSGANTPRPHLVIPRITLSDPNGSESQVEEENAAAAIVSSSAYNDAAEFSTRSVAGVPL
RLLGRQYAVDRRSPDSEDSPGPPDGVQEGPSQPSDPPFPWRGLLAPYDIGLPRAEVSFRP
NLTRAPPDRAAEREADNFFSRPYFAQHFGATRNMSASVVTHRIQAWDFTHYNIPEISDSA
ANVVVRKCKIHNDASVDISVDGTMLAALVPESQAMTMVGVYSLREKSRGQLLYSYIFAPN
TICVSLSPVARHLVVGFASHTPRFVSHHNTKQVVAQIYKLCDNPMFYGRGQAGHLQFLRD
IEVMSDHRHTSLNCIRWLPYPGQGLIYGTNRGQLNILR
NT seq
4977 nt
NT seq
+upstream
nt +downstream
nt
atgtctagagcaaagtcaaaggtggcatcaacccatggtgaccataatatttatgtaagt
gaggtaaaaactggacgatgcatctgcaccctcgaaggtcatcccagaactccctggtgt
gtagctttccatcctgcctcaaatgagataattgcctcgggatgcctaggtggtgaagta
agagtctgggatctaaagggaggcagtgaagtttggaccacagagaaaaacacagtcatc
gcatcactagccttccacccaacagatcaagtacttgtcatagcaacttttaatgaaatt
tatttttgggattggtttcaaccacacccttttgctaagatatctactgcagatgaaaaa
gagaaagtcaggtacgttaagtttgatccacttggtcacaaactcatcactggcattgca
aacacatcccacgatcgacagagccatggggccagtagaaccagtgggtgcacaaatggc
tcattcccttcacattcagaattagtagaaagggagcagcagctttcacatcgttacaac
caattatcaagccagtatcttaacctgatgtcacgatatgaagcccttaccagcagaaat
tttaataatgtgccgagaacatccagtagaattgataggggcacagacccgatagatcca
cctccaactcaagggcaacaagctctgctcaaccaggctagacagtttgcaagacaagtg
actgaggagaggagagcaactttacaaagtcaagaatcaacaggtgaaatatcaaggaac
agaaccacatgggggtcccaagacttacattctggacgggattcacaagccactaatgac
ctaaatgtgagactggaggaggactatggtcttagtgcagtgcggactctgagacagatc
attagtgatgacagtgcatcatcttcaagtttagattccagctcatctgcgacgagtggt
acaagtggaatctccgagagaaatactcgcctttcactcctgtggacctcaaggcttcac
cgaccagggcaggattctgacagtgcgggagaggcttctagtgtacagagtttaggggat
aatgctgtcagtgggatgggggatctccgagcaccaatgggtggggaggaaggggttaca
ggtagtaggagaggagacaattttgttcttgatcgtagaaattacagacgaactgatgat
agaggcagtgatgaggatgatgtaacagtaggtcctgttggaccaaatcttcgatcaaca
gggtctcaatcagagcgtcaaggtactttgtggggttacttcacaagtaatggttctgtg
atccaaccaggacgctcaagagtgcctagggaaaacagaactgaaacagaaattgaaaac
agtggtaataacactgctgaaaatgttattggtagtgatgaaccagaaaactcgcaagaa
agtgccgtacaacaaagtgttgagaacaatggtgcaccttctagtgatccacatatactc
tctcagagtacaggaacagctcctgcaacaaggggaactgatcctgtgagactcggcaac
actggggagattcctccaagtgatgctaatgaggatcttgcagtgcctgggccatcaggg
ttgtctggaatgccacgctctcagatgtcttcactttcttctgcgacgaggtacccaagg
tcttcgtcattagatccacagtttggagtacaacttcttagtcgtcacattgagaatatg
caaagaatatgcagagcacatttagaaataacgcggcatagacatgagatacttcgcctt
cagcagatccgttctatgttatatgatatccagcaccagatacattctctgagggtttct
gttgaccagtctatggaggatttaaatggtccatcagcagacagccctcctacaaccagc
cagagggttggtattcctaatgaagatgaccctagtgctcagccacccagccttggtcct
agtgataacgtgtcctctctgcctctgattcgtcactggtccagaacaagccccaggact
gtagcccggctgcagcggggaccttttggaaccagaacacgttctagacattcccacaga
ccctgggtgatgtctccgtgcatgcttcgtcgcattcctcgtcgccgtgctgtccgcact
cgtcttactttacctgggctatctgcatcccatcatggagcaagtggagcactgggaggg
gggctggacaggacaacctctccaacaagaggattaatagaacctggagcatcagcatca
ggcaccggagcagtgattgggcctctgccaacaccaccacctgatcaaggagattctgag
gaacaacccagggatatagtgcgcattatatctggcaaccagtatggtgcacacactcgc
acacatccccagatattacatcattcgtttgagcgacttcaggaacggttacgagaaaga
caagaagcgttagaacagcaggagagacgtctacaaggcttccttaatgcatcatcacct
gcttcatctacaacatcatctgtaacttcatctgcatcccaggatcatgaagaagaccca
ccaagtccaccagaacaatatcgtcgagctggtccgccaactacatccttagcatcaaga
attgcaaatatgatagctcatcaagttgctaatggtgccagtacaagtactgctggttca
gatcatgaaggcacaaatcaccaaaatgaaacatctgatacctctacaaccatgaatgat
agatcagcaacacgtgcactaaacaggaatgcagcaggttcatcaactaggtctcctgct
agttcaacacgtagacctccacatcggtcttcagacaggccgctgagtgtgccagataga
cccaatgtagagccatcctcaagttcatatgacagattaaatgaaaggaggtcaagtggg
agaagtgatgggccatatgataggttgtcagacaggtggtcagatttggataataatggg
ctgccagtgagaagctgtgctagacagcatggtagaaatagtgagagattgtctgaaaga
acaatggaatcagcaagtccatggggtgggcttcccccttctcgaaggcctgttcctcca
ggacctccaccaacagtacccccgcctttgccgcagttggatgagactgaggcccaaagc
aatgatttaaataataactctagtccatggcacaatgcaaggcgtcgcttacgacaagac
ataataaatgcaaggagagattcggttggtcgtatccctgggaactctggaggtccagtt
cgtttacccatggcagctcttaggtctcgtcacattactactgaacgaattttattaaga
gaaggactccgaagggagagaagagatcgttacaggcaaattctgcagagaatggctgac
cgcctgaacagtcttgtaaaccaagaacaagaacagcagcagcagaggcagcaggaaagg
catcagtcctcagactctgcggagggagagcaagatagttctagcagttcaatggataac
cacatgcagaatttgcggctattagttcgattggcacttaaccttatttaccaacttctg
aacttcatatgcaaccaaaacatatcgtatgaggaacgtcccatttcaagactcccaaat
ccattccgagatgaggaattgggtgcaattggtgagagacaaagaggtgatcttccccca
cctatgagtttggatttagagcctggtcttcataatttaactactcttctggaaactgtg
cgtatggctagtgaagaattaagaaatgatggagtaggaggcagtgcaggagagcctgcc
ccaccacaggatagcacaagacccataacaaatgttccaagacggctaacagacttcctg
agacgatcaggaaatttggcacgtcagcaggaccaaaatagtaggcaatctggttggagt
ggcagctctggtgcaaacactcctcggccacacttggtgataccaaggatcactctcagt
gaccccaacgggagtgagagtcaagtagaggaggagaatgctgcagcagcaatagtttca
tcatcagcctacaatgatgctgcagaatttagtacaaggtctgtggcaggagtgccatta
aggctgcttggacgtcagtatgctgtagacagacgaagcccagactcagaagattctcca
ggtcctcctgatggggttcaggaggggccaagccagccttcagatccaccattcccatgg
agaggtcttctagctccttatgatattggactaccaagagcagaagtgagcttccgtccg
aatttaacaagggcaccaccagatcgagctgctgaaagagaagctgataatttctttagt
agaccttactttgcacagcactttggagcaacgaggaacatgtctgcatcagtggttacg
catcggattcaggcttgggactttacgcattacaatattcctgaaatttctgacagtgct
gctaatgtggttgttagaaaatgtaaaatccacaatgatgcgagtgttgacatctcggtt
gatggaaccatgttggctgcccttgtgccagagagccaggccatgaccatggtcggtgtt
tacagcttgagagaaaagtcacgtgggcaacttctctatagctacatttttgcacccaat
accatctgtgtcagcctctctccagtggcacggcatttagtcgttggatttgcatcacac
acaccacgatttgtttcacatcataacaccaagcaggttgtcgcacaaatatacaagtta
tgtgacaatcctatgttttatggccgaggacaagcaggacacctacagtttctgagggat
atagaagtcatgagtgatcaccggcacacctctttgaattgcatccgatggctcccatac
ccaggccaggggctcatctatggcaccaacagggggcaattaaatatcctacgttga
DBGET
integrated database retrieval system