Penaeus vannamei (Pacific white shrimp): 113821858
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Entry
113821858 CDS
T06111
Symbol
Ser
Name
(RefSeq) protein jagged-1b isoform X1
KO
K06052
jagged-1
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Pathway
pvm04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
113821858 (Ser)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
pvm04090
]
113821858 (Ser)
CD molecules [BR:
pvm04090
]
Proteins
113821858 (Ser)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
EGF_TEN
MNNL
EGF_Teneurin
EGF_DL_JAG
DSL
EGF_2
JAG1
EGF_CA
JAG1-like_EGF2
EGF_3
EGF_laminin
ALK_LTK_GRD
EGF_MSP1_1
DUF2371
DUF3309
ABC2_membrane_2
Motif
Other DBs
NCBI-GeneID:
113821858
NCBI-ProteinID:
XP_069984471
LinkDB
All DBs
Position
12:46025858..46386446
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AA seq
1306 aa
AA seq
DB search
MVMMVPTCPGLPRGLPRRLSWLPRAIVLAAFVQVAAASGRFELEVVEVQNSQSQLWSGEC
CGGAGRSAASACPAQCRTAVALCLKEYQSTQDGGKALPRQVLETGGAASKGAGAGAGGWG
GCTYGNDTSPVIGGSSFTLAQSPPAAHIHLPFTFAWTRSFTLILEVLDMRAGMSQEARQV
IDMATYSGILVPSTDWHTLTHSSNVTRVTYRVRVLCDQNYYNTTCTKFCRPRNDKFGHHT
CDSAGDKVCRPGWTGANCETAVCKLGCHPEHGTCQEPGQCRCRPGWTGELCNECAPYPGC
KHGDCDGSPWTCVCHLNWGGILCDQDLNYCGRYPCHNGGTCENTAPDQYRCTCPEGFSGP
NCEVVEDPCAPGPCLNGGTCREVNGGFQCTCAPGWTGDTCQSNVNECETEPCEHGGTCID
EVNGFACNCTPGWEGNTCQFDSDECQGRPCINAKACRNLEGDYECDCRRGWKGKNCDVNI
NDCSGQCLNGGTCIDLVDDYHCACSKGFTGQNCEADVDECASNPCHNGGECADKVAHYQC
ICPVGYSGLQCEIDIDLCNPNPCDNEAPCINTQNDYYCNCPEQWGGKNCSQPRPACTQPP
CQVVDSCLVPDTRDPGPVRLVPSNICGRHGRCVSHADGNFSCVCVPGFTGQYCHINVNDC
ESSPCANGGTCVDLVSGFQCVCDQGWEGPTCDRDTDECADQPCRNNGTCVDGKVDFACTC
PEGWKGRTCASTTSHCDASTCQNGGVCADLGTAFVCRCPEGWKGTTCQIAERRACDSSPC
KNGATCVNTGDGFTCLCQDGWDGATCQNNINECATYPCYNGGRCLDGINTRVCKCAPGFA
GPDCRINIDECASSPCAFGSTCRDGPGYFRCVCPPGRTGHRCDRVELPNDTGVDTPKPCF
WDGELRQHGAVWTHQCNSCHCSHGTASCSAVWCGPENCLRSRDPAHYPCKPVQVCVPGPP
EWCLAGACEPWGECRDLSHDEQKVAPPSNPGPEDCQPNRATLNNACARLTLVLDRARLHV
GARVQTMCRGLRAAWAGRHGHTATPSPVILCGLVAGTNDTVEVTLSYPTGGPHGDVTVAA
KTLGELVSKRLTTVSALTAVVEVKVETTVVSGENPGIANGVLAAVTVVLVVLVILAVAAL
GYWQCRRRHLQAHHRNAFPSHSSRHKLAEDAHAEKSNNENEEKLWRYHNPLKTSSFCGGP
GDEAGPSCSRVTPQGPGDPRVAPLGSPVGLIQVPKASLATPETDLSDCESPTHGLPAAMR
KVQNADVERNITPHDPACKSIQKEINLKAISPRAAEADHMTSEVVV
NT seq
3921 nt
NT seq
+upstream
nt +downstream
nt
atggtgatgatggtgcctacctgcccggggctacctcgggggctacctcggaggctatcg
tggctcccgagggctatcgtcctcgccgcttttgtacaggtggcggctgcgtcgggccgc
ttcgagctggaggtggtggaggtgcagaactcgcagtcgcagctgtggtcgggcgagtgc
tgcggcggcgcgggccgctccgccgcgtcggcgtgccccgcgcagtgccgcaccgccgtg
gcactctgcctgaaggagtaccagagcacgcaggacggcggcaaggccctgccgcgccag
gtcctggagacgggcggcgccgcgtccaagggcgcgggcgcgggcgcgggcggctggggg
ggctgcacctacggcaacgacacctcgcccgtcatcggcggctcctccttcacgctggcc
cagtccccgcccgccgcccacatccacctgcccttcaccttcgcctggacgagatccttc
acgctgattctcgaggtgctggacatgcgcgctggaatgtcgcaggaggcccggcaggtg
atcgacatggccacctacagcggcatcctggtcccgagcaccgactggcacacgctgacc
cacagcagcaacgtgacccgcgtgacctaccgcgtgcgcgtcctctgcgaccagaactac
tacaacacgacctgcaccaagttctgccgccccaggaacgacaagttcggccaccacacc
tgcgactcggccggggacaaggtgtgccgccccgggtggacgggcgccaactgcgagaca
gctgtgtgtaaacttggttgtcatcctgaacacggaacatgtcaagagccgggacagtgt
cgatgccgaccgggctggactggcgagctgtgcaacgagtgcgcgccgtacccgggctgc
aagcacggcgactgcgacggctcgccctggacctgcgtctgccacctcaactggggcggg
atcctgtgcgaccaagatctgaactactgcggccggtacccgtgccacaacggcggcacg
tgcgagaacacggcgcccgaccagtaccgctgcacgtgccccgaggggttctcaggaccc
aactgcgaggtggtggaggacccctgcgccccggggccctgtctcaacggcggcacgtgc
agggaggtcaacgggggcttccagtgcacgtgcgcccccggctggaccggcgacacgtgc
cagagcaatgtgaacgaatgtgagacggagccctgtgaacacggcggaacttgcatcgat
gaagtgaacggcttcgcctgcaactgcacgccggggtgggagggaaacacgtgccaattc
gactcggacgagtgccaggggcggccgtgcatcaacgccaaggcctgccgcaacctggag
ggcgactacgagtgcgactgccgcaggggctggaaggggaagaactgcgacgtcaacatc
aacgactgcagcggccagtgtctcaacggcggcacctgcatcgacctcgtggacgactac
cactgtgcctgctccaagggcttcacgggccagaactgcgaggcggacgtggacgagtgt
gccagcaacccgtgccacaacgggggcgagtgcgcggacaaggtggcacactaccagtgc
atctgccccgtgggttactcggggctccagtgcgagatcgacatcgacctctgcaacccg
aacccgtgcgacaacgaggctccgtgcatcaacacccagaacgactactactgcaactgc
cccgagcaatggggcggcaagaactgctcgcagccccgcccggcctgtacgcagccgccg
tgccaagtggtggacagctgcctcgtgcctgacacccgcgaccccggccccgtcaggctc
gtgccctccaacatctgcggcaggcacggccgctgcgtcagccacgccgacgggaacttc
tcctgcgtgtgcgtcccgggatttaccgggcagtattgccacatcaacgtgaacgactgt
gagtcctctccctgcgcgaacggcggaacgtgcgtggacctcgtcagcgggttccagtgc
gtgtgtgaccagggctgggaggggccgacctgcgaccgtgacacggacgagtgcgccgac
cagccgtgccggaacaacggcacgtgcgtcgacggcaaggtggacttcgcgtgcacgtgc
cccgaggggtggaaggggcgcacgtgcgcgtccaccacgtcccactgcgacgcctccacg
tgccagaacggcggggtgtgcgccgacctgggcacggccttcgtgtgccgctgccccgag
ggctggaagggcaccacgtgtcagatcgccgagcgccgcgcctgcgactcgtccccgtgc
aagaacggcgccacgtgcgtcaacacgggcgacggcttcacgtgcctgtgccaggacggc
tgggacggcgccacgtgccagaacaacatcaacgagtgcgccacgtacccctgctacaac
ggcggccgctgcctggacggcatcaacacgcgcgtgtgcaagtgcgcgccgggcttcgcc
ggccccgactgccgcatcaacatcgacgagtgcgcgtcgtcgccctgcgccttcggcagc
acctgcagggacggccccggctacttccgctgcgtgtgcccgccgggccgcacgggccac
cgctgcgaccgcgtcgagctccccaacgacacgggcgtcgacacccccaagccgtgcttc
tgggacggcgagctgcggcagcacggcgccgtctggacgcaccagtgcaactcgtgccat
tgcagccacggcaccgcctcctgctccgccgtctggtgcggccccgagaactgcctgcgc
tcgcgcgaccccgcgcactacccgtgcaagcccgtgcaggtgtgcgtgccggggccgccc
gagtggtgcctggcgggcgcgtgcgagccgtggggcgagtgccgcgacctgagccacgac
gagcagaaggtggcgccgccctccaaccccggccccgaggactgccagcccaaccgcgcc
acgctcaacaacgcgtgcgcgcgcctcacgctcgtgctggaccgcgcgcgcctgcacgtg
ggcgctcgcgtgcagaccatgtgccgcgggctgcgcgccgcctgggcggggcgccacggc
cacaccgccacgccctcgcccgtcatcctgtgcggcctcgtcgccggcaccaacgacacg
gtcgaggtcacgctgtcgtatcctacaggagggcctcacggcgacgtcacggtcgccgcg
aagaccctcggcgagctggtcagcaagaggctcaccaccgtcagcgccctcaccgccgtg
gtcgaggtcaaggtggagacgacggtcgtcagcggcgagaacccaggcatcgccaacggg
gtcctggcggccgtgacggtggtgctcgtggtcctggtgatcctggcggtggcggcgctg
ggctactggcagtgccggcggcgccacctgcaggcgcaccaccgcaacgccttcccgtcg
cactcgtcgcgccacaagctggccgaggacgcccacgccgagaagtccaacaacgagaac
gaggagaagctgtggcgctaccacaaccccctcaagacctcgtccttctgcggcggcccc
ggcgacgaggcggggccctcctgctcgcgcgtcacgccgcagggccccggcgacccgcgg
gtggcgcccctgggctcgcccgtgggcctgatccaggtgcccaaggccagcctggccacg
cccgagacggacctcagcgactgcgagtccccgacgcacgggctgccggcggccatgcgc
aaggtgcagaacgccgacgtggagcgaaacatcaccccgcacgacccggcctgcaagagc
atacagaaggagatcaacctgaaggccatctcgccccgggcggcggaggcggaccacatg
acgagcgaggtggtcgtatag
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