Penaeus vannamei (Pacific white shrimp): 113822031
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Entry
113822031 CDS
T06111
Symbol
nclb
Name
(RefSeq) periodic tryptophan protein 1 homolog isoform X1
KO
K14791
periodic tryptophan protein 1
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pvm03009
]
113822031 (nclb)
Ribosome biogenesis [BR:
pvm03009
]
Eukaryotic type
90S particles
Other 90S particles
113822031 (nclb)
Pre-60S particles
Other pre-60S particles
113822031 (nclb)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40_CDC20-Fz
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40_Prp19
Beta-prop_CAF1B_HIR1
WD40
Beta-prop_RIG_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR3_2nd
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_RFWD3
WDR55
Beta-prop_Aladin
EIF3I
WD40_Gbeta
ANAPC4_WD40
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
Beta-prop_WDR41
Beta-prop_WDR19_1st
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_TEP1_2nd
WD_LRWD1
Beta-prop_DCAF12
Beta-prop_ACSF4
MIOS_WD40
NBCH_WD40
Pep3_Vps18
TAF1C_beta-prop
Beta-prop_WDR35_TULP_N
Beta-prop_IFT122_1st
Nop53
Beta-prop_SCAP
Motif
Other DBs
NCBI-GeneID:
113822031
NCBI-ProteinID:
XP_027230342
LinkDB
All DBs
Position
42:14732346..14893424
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AA seq
626 aa
AA seq
DB search
MPSADKGLKRKRKKTKGTMESDQMSFITCAAWVPKGIAKSKPDKIGVTPEELARIIHETR
GNLKELDDEENEEESSDEENEEEMEGEDEDCDEKEQGDDKENQEIEDDEEEIEDEEFEEE
EVEKEAPETEPMVEEATMAEVPEKKEGLSKSQKRRKKKNKKKELKKKQEEDEEEQELDDI
LNLDNYDKEEDTISQKLTMSNIAVFANNDDDPHLTVKDADNKDSDDEDETIMSSDNLVAV
GHVDGDAAILEIYVYNADETSFYVHHDILLPAIPLCMEWMNYDPGDEYLRPGNMLAIGSM
APVVDVWDLDIADSLEPAFSLGKKGSKKKKIAGVGHKDAVLSLAWNTHAEHVLASGSVDQ
TVILWDMEHGTVAQHLKYFKEKVQSIKWHPKEAHTLLAGACDNKVRMLDCRSNDTFQAWK
VDGEVESVLWDKQSQNTHNFLVSTDAGTVYGFDGRKDKPLWTLDAHHKSCTALSMSPTCP
GCLVTASMDETVKVWDVASDKPALIEELKMNLGSIQCLSACPDWPFVFCMGGDNKENNFK
VWDIRNSLKVRTQFCPRMGMPTDEDMETEVATKALSNVHLEDDDSVQVVSGKIPPAAAAA
APTNFKPKVKKFHKKKGGHLSKKKRW
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgccatccgcggacaaagggttaaagaggaaaagaaaaaaaacaaaaggcacaatggag
tcagaccaaatgagtttcattacatgcgcagcgtgggttcccaaaggaattgcaaaaagc
aaaccagataaaattggagtcactccagaggaactggcaaggatcattcatgaaacaaga
ggaaacctaaaagaattggacgatgaggaaaatgaggaagaatccagtgatgaagagaac
gaggaggagatggagggagaagatgaagactgtgatgaaaaggagcagggagacgataag
gaaaaccaggaaatagaagatgatgaggaagagattgaggatgaggaatttgaagaagaa
gaagtagaaaaagaagccccggaaacagaacccatggtcgaggaagcaaccatggcagaa
gtacccgaaaagaaggaaggattgagtaaaagccagaagaggaggaagaaaaagaacaag
aagaaagagctcaagaaaaagcaagaagaagacgaagaagagcaagaattagacgacatt
ctcaacctggacaactacgacaaagaagaagataccatctcacagaagttaacaatgagc
aatatcgctgtcttcgctaacaacgacgatgatccccacctgactgtcaaggatgctgat
aataaggacagcgatgatgaggacgagaccatcatgtcgagtgataaccttgttgcagtt
ggtcatgtcgatggtgatgcagccattttggagatatatgtgtacaacgcagatgaaacc
agtttttacgtccaccacgacatcctccttccagcgatccccctatgtatggagtggatg
aattatgatcctggagatgaatacctcagaccaggcaacatgctggccataggaagcatg
gcacctgtagtggatgtgtgggacctcgacatagcagattccttggagccagccttctct
cttggtaagaaaggaagcaagaaaaagaagattgcaggtgtcggacataaagatgcggtg
ctttcccttgcctggaacacacatgcagagcacgttttagcaagtggatcggttgaccag
acagtcatcctgtgggacatggagcatggaacagttgcccagcatttaaaatactttaag
gaaaaagtccagtccataaagtggcaccctaaagaagcgcacactctgcttgcgggagcg
tgtgacaacaaagtgagaatgcttgactgcagaagcaacgacacattccaagcgtggaaa
gtggatggggaagttgaatcagtgctctgggacaaacagagtcaaaatactcacaatttt
ctggttagcacagatgcaggcacagtgtatggatttgatggcagaaaagataaaccttta
tggactttggatgcacatcataaatcatgtacagcattgagcatgagccccacctgtcct
ggatgcctggtgactgcctccatggatgagacagtcaaggtgtgggacgtggcctcggac
aagccggccctcatagaagagctgaagatgaacttgggctcgatccagtgcctctcagcc
tgccctgactggccctttgttttctgtatgggcggggacaacaaggaaaacaactttaag
gtttgggatatcaggaactctcttaaagtgcgtacacagttctgccctcgcatgggtatg
ccaacggatgaggatatggagacagaagtagcaactaaagccctgagcaacgtgcacctt
gaagacgatgacagtgtccaggtagtgtcaggaaaaataccccctgctgctgctgctgct
gctcctaccaacttcaagcccaaagtcaagaaattccacaaaaagaagggtggccatctt
agtaaaaagaaaagatggtaa
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