Penaeus vannamei (Pacific white shrimp): 113822099
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Entry
113822099 CDS
T06111
Symbol
MED1
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 1
KO
K15144
mediator of RNA polymerase II transcription subunit 1
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pvm03021
]
113822099 (MED1)
Transcription machinery [BR:
pvm03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Middle
113822099 (MED1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med1
Motif
Other DBs
NCBI-GeneID:
113822099
NCBI-ProteinID:
XP_027230423
LinkDB
All DBs
Position
Unknown
AA seq
1714 aa
AA seq
DB search
MASTERPILDNPSKLQQNEDGGGGGGGVGVGGGGRSASSTPTIAATPVPVTATPATPATA
TATATNVSSPTSTAWQMEVLMERLRSKAGGYRSLVESAKGIKHAIMNKSHLMDPSERAAL
GSCLDSLQGNIKVTSLSAMVERLEAIAKQLGLKFTAGTTGSEVFVSCDMFYVEVLLDTDG
RVRDVKVELAGDQNAREGQSSPELMECLSSGDFVDFTAHLEGFSSIYQLNADKKIKSKAF
QALQALETDLTKLFELAQETLTDPYKLVLKSPVGLLQRRRGGHAMRLVYFVSPYELLDVQ
AGRSITLTTETPSSRDLSHYVTVNIDASNSHKLQTTTLMIITKQPNGKKLPSFSGLTNDN
SMTLPACFSLKLRKPMPVSLALIQRINEVTCLDCVDLSNQQSLISLIVQQATDGQFEYNS
NRGLFVTLPDQQHCYFMTSSGELPGVMVSSIPFTHPTHITNILMCLRAQAAFNALISSCV
RPASKQDPDSAYMFEVTAASHEYISVTFEHPQEESTATAEIDLTDLCNARCRLHTLTPDP
GFCSEEYATKVLQRCLSIPVTMRAVMKKVAKEERKDAVTGGDSAVMMGGGKLNSDLNQNT
KFLLNEYDKLGMRRDQLMAPHVNNLNNVVANTAPGHGYYNGPFPSSNHHSGGGDASTNPL
AALGNAVQEAGTPLGYGALLGAVGHKPNLNQPFLGDAKPAKVRKKKPGLDLDRKSPKYGD
DVVIDLDERSSDSYLGEGVPAIVDNMKRRDVKMEKLQTIFNKRRSSSDSGTTDIATTDLA
ALREQVYGAANAANFAKINSYSHKDSKDIKKVKKPRTDGPDSRKSPIVLDLTETESSSKK
SGSGSGSSSSHSSSSLSAALLKRPGIEIIPIPGSTTPISIPSSITVTPVIKSADDKNKDK
KDRRDKKDLDRKDKKRKRDDSPSSNSSSSSSSSSSKPSKVQIISSNLKHSPISSLEKFKS
ESGSKSGLTGITVKPSTPPYQSPSKKPSLSPGMTKSMIHNKLSVSPTHKPNKVIYSPNQS
SSSHSSSPKGRSSPKPSTGSPKHPSMSPKHTSLGKPSMTQLKSASPTFSKPSLSPKLSKS
KDKERSSSSSPSRPLPSSSSSSSSSMSSSSSSSSSSSLSKPKVSSSSSSSGTEKLKSSLS
DALTITKVSTGESSSSSSLATSFLANSQSNTSSTSMDEKAPSFPVDKAKASPPKNRKGSS
LSDIVDKLRAGVGGTADAVTIIEKNEKDDKDSSKTGAGEGKKTGDKKEEFTVKPSTGLKL
TINKAKMKEGNLSKSSSSSSPNAKPSLSKSPSGLKPGVISGPASKKSISSLPPIPKLPPS
SVSNVTATAVSPLGTTLPGVHSSPLQYQRERVKDKDREKDRSSSGERPRPKETSPAKSLN
NSSSDGKKDSPSNKTSLTKPVSKDDHSVSQVSSHRKLESSESIDKLSKSVFQNESGDKIE
KSSTTKAEADSTHSTSADSSVSNKLSDSFSEKGGVGHHNSLASSNKLSTPVSSLSSGTQA
APSSSSDMIRQRDVFQQPQFKPSKEAKEDTKPKSDIPLPLPRPSVSSSSSGAMTTSDHLP
SDPVPSLTPTSSSASLNSSIPPPRQPPPPHSASNKAADGIDHSTGSSLDLHDKSKSSESL
VSSMPGPPPSSHAMSQPPPPKTTTPTVGYPPSSPSMSFKIVKSPAPVASPLNMISPHPVA
SPLNMISPHSVASSPSSCIIDDDLMDEALMGTRK
NT seq
5145 nt
NT seq
+upstream
nt +downstream
nt
atggcttccacagaacggccgatcctcgacaatccctcgaaattacagcaaaacgaggat
ggaggaggaggaggaggaggagtaggagtaggaggaggagggaggagcgcatcgtccacc
cccaccatcgccgccacccccgtcccggtcacagccaccccagccaccccggccacggcc
accgcaacagccactaatgtcagctcccccaccagcacggcgtggcagatggaggtgctc
atggagaggctaaggagcaaggccggaggatacagatcgctcgtcgagtcagccaaaggc
atcaagcatgctattatgaacaagagccacctcatggaccccagtgagcgtgcggccttg
ggatcttgcctcgactccctccagggcaacattaaagtcacctccctctcggccatggtg
gagcgactggaagccattgccaagcagctggggctcaaattcacagctgggaccacgggc
tcagaggtattcgtctcttgcgacatgttctacgtggaggtgctattagacacagacgga
agagtgcgtgacgtgaaggtcgagctagcgggggaccagaatgcgcgcgagggacagtcg
tctccggagctgatggagtgtttgagcagcggagattttgtcgacttcacagcacacctc
gagggcttctcatcgatataccagttaaatgccgacaagaaaatcaaaagcaaggcattc
caagccctacaggccttggagacagatctgacgaaactttttgagttggcgcaggagact
ctcacagacccctacaagttggtccttaaatcccccgtcggcctcttgcaaaggagaaga
ggaggtcatgccatgcgcttagtgtatttcgtctccccctatgagctgctggatgttcag
gctggccgctccatcaccctcaccacagagaccccatcgtcgcgggacctctcacactat
gtcacagtcaacattgacgcatctaactcccacaaactccagaccaccacactcatgatc
atcacgaaacagcccaatggcaagaagctgccatccttctcggggctgaccaacgacaac
agcatgacgctacctgcctgcttttcactcaaactccgcaagcccatgcctgtgtccctg
gccttgatccagcgcattaacgaggtgacctgcctggactgcgtggatctgtccaaccag
cagtcgctcatctccctcatcgtccagcaggccacagatgggcagtttgagtacaacagc
aacaggggcttgttcgtgaccttgccagaccagcagcactgctacttcatgacgagctcc
ggtgagctgccaggggtgatggtaagctccatcccgttcacacaccctacgcacatcacc
aacatcctcatgtgcctcagagcacaggcggcgttcaatgcccttatctcatcgtgtgtg
agaccggccagtaagcaagacccagactcagcatacatgttcgaagtgacggccgcaagc
cacgaatacatttccgtcacattcgagcatccacaggaggaaagcacagccacagcagaa
attgatctaacagacctctgcaatgcacgctgtcggttgcacaccctgacccctgaccca
ggtttctgctccgaggagtatgccacaaaggtgttgcagaggtgtttatccatcccggtt
acgatgcgtgctgtgatgaagaaggtggccaaagaggagcggaaggatgcggtgacagga
ggcgactcagctgtgatgatgggaggcgggaagctcaactccgacctcaaccagaatacc
aagttcttgttgaatgagtatgataagttgggcatgcggagggaccagctgatggcgccg
catgtcaacaacttgaacaacgtggtggccaatactgccccagggcatggctactacaat
gggccgttcccctcgtccaaccatcattcgggagggggcgatgccagcaccaaccccttg
gccgctctagggaatgccgtgcaggaggcaggcactcccctgggatatggggctctgctg
ggtgctgtcggccacaaacccaacctcaaccagccttttttaggtgatgctaaaccggca
aaagtccggaagaaaaaaccggggctggacctggaccgcaagagccccaagtatggggat
gacgtggtcatagacctggacgagagaagctcagactcttatctgggggagggcgtgcca
gccatcgtggacaacatgaagcgcagggatgtcaagatggagaagttacagaccatcttc
aacaagaggaggtcatccagcgacagtggtaccacagatatcgccaccacagaccttgcc
gccctgagagagcaggtatatggggctgctaatgctgccaacttcgccaagatcaactcc
tactcccacaaagacagcaaagacatcaagaaagtgaagaagccccggacagatgggcct
gactcccgcaagtcgccaattgtgctggacttgacagagacagaaagctccagcaagaag
tctggcagtggtagtggcagcagcagcagccatagctcttcctccctgagtgcggcactg
ctgaaacggcctggcatcgagattatccccatcccaggcagcaccacacccatttcgatc
ccttcctccataaccgtcacacctgtcattaagtcggctgatgacaagaacaaggacaag
aaggaccggcgtgacaagaaggacctggaccggaaggacaagaagaggaagcgagatgac
tcacccagcagcaacagctcaagcagcagcagtagtagcagtagcaagccctcaaaggtg
cagattatcagcagcaacctcaagcactcccctatatcatcgctggagaaattcaagagt
gagagtggcagcaagtcggggctcacgggcatcacagtcaagcccagcacccctccctac
cagtccccctccaagaagccctctctgtcgcctggcatgaccaaatccatgatccacaac
aaattgtcggtgagtcccacccacaagccaaacaaggtcatctacagccccaaccagagt
agcagcagccactcttcctcgcccaaggggaggagtagccctaagccctccacagggagc
cccaagcaccccagcatgtcccccaaacataccagcctcgggaagcccagcatgactcag
ctgaagtctgcctccccgaccttttccaagccatccctctcccccaaactcagcaagagc
aaggacaaggagagaagctccagctccagcccctctcggcccctgccctccagttcctcc
tcctcctcttcctccatgtcctcctcatcgtcctccagctcctcctcctccctttccaag
ccaaaggtgtcatccagttcatcctcaagcggaacagagaagttaaaaagcagcttaagt
gatgctctgacaatcacaaaggtgtccacaggtgagtcatcctcatcctcttcattagcc
acatccttccttgcaaactcacagtccaacacatcatcaacgtcgatggacgagaaagcc
ccatcattcccagtggacaaggccaaggcatccccgcctaagaatcggaagggatccagc
ttgtcagacattgtggataagctgagagcaggtgtgggaggcactgccgatgctgtcact
attattgagaagaatgagaaggatgataaagactcgtccaagacaggagcaggtgaaggc
aagaagacaggagacaagaaagaggaattcacggtcaagccctcaacgggattgaagctc
actatcaacaaggccaagatgaaggaaggcaacctctctaaatcctcctcctcctcctcg
cccaatgctaagccttcgctctcaaagtctccatcaggcttgaagccaggagtcataagt
gggccggcttccaaaaagtccatttcgagccttccccccattcccaagttgcctccatct
tctgtgtcaaatgtaacagcaacggcagtttctccacttggcacaacgttaccaggggtc
cactcgagccctctgcagtaccagagagaacgggtgaaggacaaggatagggaaaaggac
cgttcaagttctggtgaaaggcccagacctaaagaaacttccccagccaaatcgctgaac
aacagctcatcggatggcaagaaagatagcccctctaataagacttcccttactaaaccg
gtgtctaaagatgatcatagtgtgtcacaagtatcaagtcatagaaaattggagtcatca
gagagcatagacaaattaagcaagtcggtatttcaaaatgaatcgggagacaaaattgag
aagtctagcaccactaaggcagaagctgattctacccatagcacaagtgcagactcttca
gtttcgaacaagttgtctgatagtttttctgagaaaggaggtgtgggccatcacaatagc
ttagcaagttccaataaactctccacaccagtgtctagtttaagttccggcacccaggct
gctccctcgtcatcaagtgatatgatccggcagcgtgatgtgttccagcagccccagttc
aagcccagcaaggaggcaaaggaggataccaagcccaagtcagacattcccctgccactg
ccaagaccatctgtgagttcaagcagtagtggggccatgacaacttcagatcaccttccc
tcagacccagtgccatccctgacacccacctcctcttctgccagcctcaactccagcatc
cctcccccacgccagccaccacccccacattctgcctctaacaaggctgcggatggcatc
gaccacagcactggctcaagtctggacctccatgacaagtccaagtcaagtgagagcctt
gtctcgagcatgccaggcccccctccctcgagccatgccatgagccagcctcctccccca
aaaacaacaaccccgactgtaggctaccccccctcctcaccttccatgtccttcaagatt
gtgaagtccccagcaccagttgcctccccattaaacatgatctcgcctcatcccgtggcg
tcccctctgaacatgatctcgccccactcagtagcctcgtcaccctcttcatgcattata
gacgacgacctcatggacgaggcgctaatgggcacgcgcaaatag
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integrated database retrieval system
