Penaeus vannamei (Pacific white shrimp): 113822211 Help Entry 113822211         CDS       T06111                                  Symbol dom Name (RefSeq) helicase domino isoform X1   KO K11661   helicase SRCAP/SWR1 [EC:5.6.2.-] Organism pvm  Penaeus vannamei (Pacific white shrimp) Pathway pvm03082   ATP-dependent chromatin remodeling Brite KEGG Orthology (KO) [BR:pvm00001]  09120 Genetic Information Processing   09126 Chromosome    03082 ATP-dependent chromatin remodeling     113822211 (dom)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03036 Chromosome and associated proteins [BR:pvm03036]     113822211 (dom) Chromosome and associated proteins [BR:pvm03036]  Eukaryotic type   Chromatin remodeling factors    SRCAP complex     113822211 (dom)    SWR1 complex     113822211 (dom) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  SNF2-rel_dom Helicase_C HSA Myb_DNA-binding Motif Other DBs NCBI-GeneID:  113822211 NCBI-ProteinID:  XP_027230550 LinkDB All DBs Position 30:complement(30848504..30887649) Genome browser AA seq 2932 aa AA seqDB search MSARETSLQNESSTPGQNVTQVIQAAGGNAPSSSSNNVSGGMESQLAQQLMSPVKGSSLG SGEGELVRLSDPRSLHSYTPHTSPIPSGHATPVAAEVTPTTTPSSSPRRPLPSVSLEPPA KRIKVEEKPTNILELRNLIIDWKKVKLESVKDKYNDHLVEKFFLENDGNMMDFQSWCRRP TPELLQYIRQNKLEGDESLEAKYTIPNPLQLSSVIQVKSEPQTDSQSPSKSGLSLTSRGS ASPVKPSKGMASPGVGSRQKTPSTSEAAPSSTQQDQMVEKARQEAYVMQRIAALRKEGLW PEKRLPKVQEPPRAKAHWDYLLEEMVWLSADFAQERKWKKAAAKKCARMVQKYFQDKALQ AQKAEKEQEMRTRKIAAFIAKEIRTFWGNVEKLVEYKVTTKLDEKKKKALDQQLSFIVDQ TERYSSWLAESMNKPVDSTAASTRSNSPSRDSRVSDEEFQPVESSDDDEGTIAREDDNPE EQASELQLLQEESKQTIEDLLKELPPGYLDRDSDTSSCSGDAEQPEALEASEAAVQEEEA SEKKEKGMGNVEPLDKDKGEGEGEEEAMEVEQEKKEEDSEKVDGVGERKTVKDIRKRKVK LKTSGGEGTSKKEFDKDFEVEESEDDDENTIEEQEEKEGEVNHQEELDDLQAENEMSVEE LRRKYAELAASAEPMEEDIDNESSDDDDDEDNEEDEEEMEVDGEEEEQHEDSDRDEECSE EGEETPSDEEEEDLGLGLATLMDENFETQDKDTKGDSEKADKELQDASAVAEALQPKGFT LSSTSVTTPIPFLLKHMLREYQHVGLDWLTTMYEKKLNGILADEMGLGKTIQTISLLAHL ACEKGNWGPHLIVVPTSVMLNWEMEFKKWCPAFKILTYYGTQKERKMKRQGWTKPNAFHI CITSYKLVIQDHQSFRRKKWKYFILDEAQNIKNFKSQRWQLLLNFQSQRRLLLTGTPLQN NLMELWSLMHFLMPNVFASHREFREWFSNPVTGMIEGNKEYNDSIIKRLHKVLRPFILRR LKTEVEQQMPKKFEHVVMCRLSKRQRYLYEEFMSRTKTKETLASGNFLSVINVLMQLRKV CNHPNLFEPRPTVSPFMMEGLLYRAPSIVWGITDYDPFKHVDLFSLNLLLADLELCLTAF AAHRIRKFQASKRLIEEIDSAPDPPPKCPAGKIKLHVRPSSQSVPKPGGSPVTTPRAPTP VGTVRAPLQQAPAVAAAPASVPGGGMRFQLVQQGGTIKAIQVAPGTGSSGMMVQQTPQGP RLVMPQRVGISNPTGAATVGGAPTVAGTSAVGGLQLLQTSSGQLLLTTAPVQKPVNQTMS QGVSGTAAAALLQRLQGLKGLQGSMITTGAGGRPVLRLPLPTNTLRPQTQVLGTVPNPGA TPAVGGTTAVRPPTTPVQSTPTASPVRPGPSSPAPRTQTANSTPSTTPTKVMTRVEQREL ERLEEKRKDEERKRSLFFLNDLDERKRKNRKDKLSLISKLNTRRCHACPIYGSDLIEAVN VIGNVQGLALSTEWCGQGMVHCQHATMVNPRYYWSQTHSLHMMVNTPVTYLQKLKDMTDR YVFCIPSVVAPYPQMRMSHPQPSKLWMDERMKVVMKNGLGPRMSPLHHIMNASVTQFPDP RLIQYDCGKLQTLDRLLRQLKSGSHRVLIFTQMTKMLDVFEAFLNYHGHLYLRLDGTTRV DQRQVLMERFNQDKRIFAFILSTRSGGIGVNLTGADTVIFYDSDWNPTMDAQAQDRCHRI GQTRDVHIYRLISEKTIEENILKKANQKRLLGDLAIEGGNFTTAHFKRSTIQDLFDVNVA EHDASKRMSEVLEKNGAPEEGKEYSEGERVKMGAFESALAAAEDETDVQAAKTAKAEAAA ELAEFDENIPIEDGEGGEELSKAEQEVALLMKQLTPVEKYAMKFIESADDGWAAEAERMA AEIEQQKKEWELGRLQALKEEEERLAHNSDDELLAYSSADAHNQLWLSLCGREEMPIWQP PTPPRDENDVYIDHSLGFWYDSSIMPESALPPVYIKKEHKRLKLEPGTGGGSGDNQSGLR RPPKLRREDAVYAPRSLFDRPSPAVVRIRRDLKLQKYRGIVRPSIPLPGLKPALLTKPPA AEPENAPEWAVHEDWAIVQAVQHHLQLELPVNLLVLSPGHTPNWDLVADYVNSVSRCYRS PRHCRSRYENTILPREEGKLPPDTPPKKITKKQKSGILPKPLQKSSRSMRTSQLFAQDNN SNFSSLYCTRFETIKNIAIKRTPTTKPPLSNPTHKNPKHAQVLAESGIQYDGPLNPGQVA ANLAERIQRAKQKTAQELAQQQKILQQQLQQQQHQQQQQQQQQQQQQQQQNLQAQLTANQ LQQQLQQQQNQQSPVQQQTAQSQSQQLGQQQIQQQVSVVGSSGVQQVVSSGLASKAASSV VLSQGTAMTVATVTAATTGITTTAVTSSAAAAILSGVRTAVGTSGASTGRTTLTLQELQV RTSGSNQGTVVSVAGLTPAQLQTAKLSSQSSTQKGLTGVSRSLTPAQLQYLKQQAHARHA LALQQQGKVVTTGDQSIKRVQIAGQAGTTQKVQVAVSGGTLAGMTAIQVSQAGRTQLVKP GTVVAGASGVVATGKAVTRTVTEREVAAFFKQQQINKSGQVTQVQVPSAQLLAGLQVQGG ASGGGTPVATLVKTVSAPSTLVHTPTSVTLPASAINVTLPQARVTTAATVAKANTTQQTV RNIPLPQQLLAKQRSLVGVKGAVGLQLGGKAVGGTGLSTVQIVQGGSQKQMSQVTVQQIQ QVFKQVPHTIQHITQGGTVSGTVVGKAVAGGSVSGTNVTASGAQGITTSHSTKLVPMTVA SHQHQPQPIKQTIQVVSAGSSVVGGNSGIRVSAGERSSPSALALQAGKMANPAILSQVSA ALQGQPMSVAVRTPTQSPVRIQTSALQTQQTTQTQQGQQQTQQQGQQPGGSQ NT seq 8799 nt NT seq  +upstreamnt  +downstreamnt atgagtgcacgagaaacaagcttgcagaatgaatccagcacaccaggccagaatgtgaca caagttattcaggctgctgggggtaatgctcccagcagcagcagcaacaatgtcagtgga ggcatggagtctcagttggcccagcaactcatgagtccagtaaaggggtccagcttaggg tcgggtgagggagagctggtgaggttatcagatccacgcagcttacattcctacacaccg cacacctcacccatcccgtctggccatgcgacccctgtggcagcagaggttaccccaacc accaccccttcctcctctccccggagaccactacccagtgtgtctctggagcctccagcc aaacggataaaagtggaggaaaaacccactaatatcttagaacttagaaatctcatcatt gattggaagaaagttaaactggagagtgttaaggataagtacaatgaccatttggtggaa aaattctttctggagaatgatggcaacatgatggacttccaatcatggtgtaggaggcca actccagagttgctacagtacatccgtcaaaataaactggaaggggacgagtctctggaa gctaaatacaccatccctaatcctctgcagctttcatcagtcattcaggtcaaaagcgag cctcaaactgattctcagtctccatcgaaatctgggctaagcttgactagcagagggtca gcctctccagttaagcctagtaaaggcatggccagtcctggtgtaggatcaagacagaag actccgtctacaagtgaggcagccccaagttcaacccagcaagatcagatggttgagaag gcaagacaagaagcgtatgttatgcaacgtattgctgcattgagaaaagaaggactgtgg ccagagaaacgtttaccaaaagttcaggagcctccgagggcaaaggcccactgggactat ttacttgaggaaatggtgtggctcagtgctgacttcgctcaagaaagaaaatggaaaaaa gcagctgccaaaaagtgtgctcgaatggttcagaaatatttccaggataaagcattgcag gcacaaaaagctgaaaaagaacaggaaatgagaactaggaaaatcgcagcatttatagcg aaggaaattaggaccttctggggcaacgtagaaaaattagttgaatataaagtaacaacc aaattagatgagaagaaaaagaaggcattggaccagcagcttagttttattgtagatcag acagagaggtattcctcatggctagcagagagtatgaacaaacccgtggactcaacagct gcttccactcgctccaattctccatcacgagacagtcgggtatctgatgaggaatttcag ccagtggaatcatctgatgatgatgagggcaccattgcgagagaggatgacaaccctgag gagcaggcttcggagcttcagctgctacaagaggaatccaagcagaccatcgaggacctg ctgaaggagctcccaccaggctacctggaccgtgatagtgatacctccagttgtagtggt gatgcggaacagccagaggccctggaggcttcagaggctgcagtgcaagaggaggaagca agtgagaaaaaggaaaaggggatggggaatgtggaacctttggacaaggataaaggtgaa ggtgagggagaggaggaggctatggaagtagaacaggagaaaaaggaggaagacagtgag aaggtggatggtgttggtgaaaggaaaactgttaaagatattagaaagaggaaagtgaaa ttaaagacaagtgggggtgagggtacatcaaagaaagaatttgacaaagattttgaagtg gaggaatcggaggacgatgatgaaaataccattgaagaacaagaggagaaagaaggagaa gtcaaccatcaagaggagttggatgatttgcaggctgaaaatgaaatgtcagtggaagag ttgagaagaaaatatgcagaattagcagccagtgcggaaccaatggaggaagacattgac aacgaaagttcagatgatgatgatgatgaagataatgaagaagatgaagaagagatggaa gttgatggagaggaagaggaacagcatgaagattctgacagggatgaggagtgtagtgaa gaaggggaagaaactcctagtgatgaagaggaggaggatcttggccttggcttggcaacg ctcatggacgagaatttcgagacccaggacaaggataccaagggtgacagcgagaaggca gacaaggagctccaggatgcctcagcagtggctgaggcgcttcagcccaaaggcttcacc ctgtcttccacttctgtgactacgcccattcctttcctgttgaagcacatgctgagagag taccaacatgtaggcttggactggttaacaactatgtatgaaaagaagctaaacggtatt cttgctgatgagatgggtcttggtaaaaccattcagaccatatctctcttggcccacctc gcttgtgagaagggtaactgggggccacatctgattgttgtccctacctccgtcatgctc aactgggaaatggagttcaagaaatggtgcccggctttcaagatcctcacttactatggc acgcagaaagagcggaagatgaagagacaaggttggacaaagccaaatgcattccatatt tgtattacttcctacaagctggtgatccaggaccatcagagtttcagaagaaaaaagtgg aaatactttatccttgatgaagctcagaacattaagaatttcaagtcgcaacgatggcag ttactattaaattttcaaagccaaagacgtttattgctgacgggaacgcctctccaaaat aacttaatggagttgtggtctttgatgcatttcctgatgcccaatgtgttcgcctcgcat cgagagttccgggaatggttttccaaccctgttactggtatgattgaaggcaataaggag tacaatgacagcatcattaagagattacacaaggtgctgagaccattcatattgaggaga ttgaagactgaagtagaacaacagatgcccaagaagtttgaacatgttgtaatgtgcaga ctgtccaaacggcaacggtacctctacgaagaattcatgtcaagaaccaaaactaaggag actttggcatcaggcaattttctgagtgtgataaatgtgctaatgcagctacgtaaagtt tgcaatcatcctaacttgtttgaaccacgtccaactgtatcgcccttcatgatggagggt cttctgtacagagccccatccattgtatgggggattactgactacgatccattcaagcat gtagatctgttcagcttaaatttacttcttgctgacctagagctatgcctaacggcattt gctgcacatcgcattcgcaaattccaagcatccaaaagactcattgaagaaatagactct gccccagaccctccaccaaagtgtccagctggtaaaatcaagctccacgtgcggccgtct agtcaaagtgtgcctaagccaggaggttctcctgtgaccacacctagagcaccaactcct gtagggactgtgcgagctccattgcagcaagctcctgcagtagcagcagcacctgcttcg gtgccaggtggaggcatgaggttccagctggtacaacaaggaggtacaataaaagccatc caggttgcaccaggcacaggcagcagtggaatgatggtgcagcagacaccccagggacca cgtttggtcatgccacaaagagtgggcattagtaacccaactggtgctgccactgtgggt ggagcaccaacagttgcagggacatcagcagttggaggacttcagcttctacaaacttcg tcaggtcagctgttattaacaacagctcctgtacaaaagccagtgaaccaaacaatgtct caaggtgtcagtggaacagcagcagcagcactgctacagcgtctgcaagggttaaagggc ttgcaaggttcaatgataacaacaggtgcaggtggtcggcctgtcttgagattaccactg cctacaaatactctgagaccgcagactcaggtcttaggcactgttcctaatcctggagca acaccagcagtaggaggaacaacagcagtacggcctcccacgactcctgtgcaaagtaca cccactgcaagtcctgtgaggcctggaccgtcatccccagcacctcggacacagacagcc aattcaacacctagcaccacacccaccaaggttatgacaagggttgaacagagagagctg gagcgcctagaggagaagagaaaagacgaagaaagaaaaagaagcttgtttttccttaat gatttggatgaaagaaagcgtaagaacagaaaggataaactgtcactcatttccaaacta aacactcgccgctgtcatgcgtgccccatctatgggtcagatctgattgaggcagtcaat gtcattggcaacgtccagggattagccttgagcacggaatggtgtggccaaggcatggtc cattgtcagcatgcaaccatggtcaacccaagatattattggtcccagactcattcactt cacatgatggtgaacactcctgtgacctatcttcagaagctgaaggatatgacagacaga tatgtgttctgtattccatcagtggtcgcgccatatcctcagatgagaatgagtcatcca cagccttccaaactgtggatggatgagcgaatgaaggtggtcatgaagaatgggcttggg ccaagaatgtctcctttgcatcatatcatgaatgcttcggttacacagttccctgatccc agactaattcagtatgactgtggtaagctgcagactctagatcgccttcttcgtcagcta aagtctggaagtcatagagtcttgatatttacacaaatgacaaaaatgctggacgttttt gaagccttcctcaattaccacggacacctgtatctgagattagacggcacaacaagagtt gaccagagacaggttttgatggagaggttcaatcaagacaagcgcatctttgctttcatt ttgtcaactcggtcaggaggtattggtgtgaatctcactggtgcagacacggtcatattt tatgactcggattggaatccaaccatggatgctcaggctcaagacaggtgtcatcgtatt ggacaaaccagagacgtgcacatctatagactcatatcagaaaagaccattgaagagaac atcttgaagaaagccaatcaaaaacgccttcttggtgatctcgcaattgaaggaggcaac ttcaccacggcacacttcaagaggtctaccatccaggatctctttgatgttaatgttgct gaacatgatgcatcaaagagaatgtcagaagtcctggaaaagaatggagctccggaagag ggcaaagagtactctgaaggagagagagtcaagatgggagcatttgaaagtgccttagct gctgctgaggacgagactgatgttcaggcagcaaagacagcgaaggcagaggctgctgca gagttggctgagttcgatgaaaacattccaattgaagatggagaaggaggagaggaattg agcaaggctgagcaggaggtagcgctgctaatgaagcagctgactccagtagagaagtat gccatgaagttcatagagtctgctgatgacggttgggctgctgaagcagagcgcatggca gcagaaatagagcagcagaagaaggaatgggagttggggcgcctgcaagctttaaaggag gaggaggagcgtctggcccacaactcggacgatgagctcctggcttactcctctgccgat gcacacaatcagttatggctgtctctttgcgggagggaagaaatgccaatttggcaaccg ccaactccaccaagagatgaaaatgacgtgtacatcgaccactccttaggcttctggtat gactcgagcattatgcctgagtcggctcttcctccagtgtacattaagaaagaacacaag aggcttaaactagagcccggaacaggaggtggtagtggtgataaccagagtgggctccgc agacctccaaaacttcgtcgcgaagatgcggtttatgctccaaggtccctgtttgacaga ccttctccagcagttgtcagaatccgccgggatctcaaactgcagaagtatcgtggtatt gtacgtcccagcattcccctgcctggccttaaaccagccttgctaaccaagcctccggct gctgagccagaaaatgcacctgagtgggccgtccatgaggactgggccattgtgcaagca gtacaacaccacttacaattggagttacctgtcaatctcttggtgctatcaccaggacac acacccaactgggatctcgtggcagattacgtcaactctgtctccagatgctaccgttca ccccgtcactgccgcagtcgctatgagaatactatcttgccacgggaggagggcaagctg cctccggacactccacctaagaagattacgaagaaacagaagtctggcattcttccaaag cctctgcagaagagttctcgttctatgcgtacatctcagctgtttgcacaggataataat agcaatttttcatctttgtactgtacccggtttgagacaatcaagaacatagcaatcaag cgcacgccaaccacaaagcctcccctcagcaaccccacacataagaatcccaaacatgct caagtcctggctgaatcaggaattcagtacgatgggcctctaaacccaggccaggttgca gctaatcttgcagagcgcattcagcgtgcaaagcagaaaacagcccaggaacttgcacag caacagaaaatattacagcaacagttgcagcagcagcaacatcagcaacaacaacaacag caacaacagcagcagcagcaacagcaacaaaacttacaagcacagcttacagcaaatcaa ctgcaacagcagctgcaacagcaacaaaaccagcaaagtccagttcagcaacaaacagca cagtcccagagtcagcagttggggcagcagcagatccaacagcaagtgtcagtcgtggga agcagtggtgtgcagcaggtggttagcagtggtctggctagtaaggcagcatcgtcagtg gtcctcagccagggaacagccatgactgtggccacagtgacagctgccaccacaggaatc accaccacagctgtaacatcttcagcagctgctgccattttaagtggtgtacgcactgct gttggaacttcaggtgctagcactggtagaacaacacttactctgcaggaactccaagtt cgaacctcaggaagtaaccaaggcacagttgtcagtgtggctggcttgactccagctcag ttacagacagctaaactctcctctcagtcatccacacagaaaggtttaacaggggtctca cgatctcttactccagcacaactgcagtacctgaaacagcaagcccatgctaggcatgct ctggctttgcagcaacaaggaaaggtagtaacaactggagaccagtccatcaaacgagtc cagattgcaggacaggctggaacaacgcaaaaggtacaagttgctgtctctggagggacc ttggctggtatgacagctatacaggtgagtcaagctggaaggacacagctcgtaaaacct ggaacagttgtagctggtgccagtggtgttgtggcaacaggaaaagctgtaacacgaact gtgactgaacgggaagttgctgctttcttcaagcaacaacagataaataaatctggtcaa gtgactcaggtgcaggtaccatcagcacagttattagcaggtctacaggtgcaaggtggg gcaagtggaggaggcactcctgtagccacacttgtgaagactgtcagtgctccatccacc ttagtgcacacacccacatcagtgacacttcctgcttcagccataaatgtaacacttcct caagcccgagtgaccactgctgccacggtagcaaaggctaacaccacacagcagactgta cgtaatatccccttgccacaacagttgttagctaagcaacgatcgttggtcggggtgaaa ggtgctgttggcctacagttgggtggaaaagctgttggtggcactggcctgagcacagtg cagatagtgcaaggtggcagtcagaagcagatgtctcaggtcactgttcagcagatacag caggttttcaagcaagttccacataccattcaacacattacacagggtgggacagtaagt ggcacagttgtagggaaggcagtagcaggaggaagtgtgtcagggacaaatgtgacagca tctggtgcccagggaattaccacctctcacagcacgaagcttgttcctatgactgttgcc tctcaccagcaccagcctcaacccataaagcagaccattcaggttgtttctgctgggtct tctgtggttggaggcaactcaggcattcgtgttagtgccggtgaacgttcctccccctca gccctggcactgcaggctggcaagatggcgaatccagcaatcctgtcacaggtttctgca gcacttcagggccagcccatgtctgtagcagtgaggacacccacacagagtcccgtcaga atacagacatcagctctgcagacccagcaaacaacccaaacacagcaaggacaacagcag actcagcaacaaggacagcaaccaggcgggagtcagtga

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