Penaeus vannamei (Pacific white shrimp): 113822988
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Entry
113822988 CDS
T06111
Symbol
Tnpo-SR
Name
(RefSeq) transportin-3 isoform X1
KO
K15436
transportin-3
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Pathway
pvm03013
Nucleocytoplasmic transport
pvm03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
113822988 (Tnpo-SR)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
113822988 (Tnpo-SR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pvm03016
]
113822988 (Tnpo-SR)
Transfer RNA biogenesis [BR:
pvm03016
]
Eukaryotic type
tRNA transport factors
tRNA import factors
113822988 (Tnpo-SR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_TNPO3_IPO13_4th
TPR_TNPO3_IPO13_2nd
TPR_TNPO3_IPO13_3rd
Xpo1
IBN_N
Importin_rep_3
PML_CC
Motif
Other DBs
NCBI-GeneID:
113822988
NCBI-ProteinID:
XP_027231345
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All DBs
Position
39:complement(7804609..7825343)
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AA seq
942 aa
AA seq
DB search
MEVDINEVLVAIDTLYDLQPQDRQKHDQASQWLGQLQRSVQAWKVADQLLHTKRDVNSCF
FAAQTLRTKIQLYFGELPVEAHASLRASMLEHLCHITEHTYQGIATQLCVALADLALHMA
SWEDPIGDLISQLGPGASSPNLVPLLEVLIALPEELHSRQLRLGLNRRKQLDEYFRRKVP
SIIELLHVAVGTEGASKESTHLKALRCLASWFNIHTEKWVMLTNTCLVNDILSVVRNPQV
SPRLHEIATDCICSAMIMLEAERIQPLAEVLFAGVLQLGEPYHLAVALEDLNAITNYARI
FSELGETLVEVMVDQPGQGMGSLQVLHLLLTCIGHHDWEVAEITFNFWYKLSEVLYRKNC
DNVNEQFKPYVERLIEALYRHCQIEPDHENILLQQDDFYEFRERVQELIKDVVFICGSKP
CFQQMSNILQAPDVTKSWNLLEAALFIMQSVAKNLVPRIDNNLMVQSHPREENEVVPPIL
EAVLKQPDEVHMQVAFTSVQLLAELNEWIACHPDVLPLVLQFLTKRLHNKHLATVAAKAL
DAICQSCRDHIEQHFEGLMQIIESLDSFSISNEAVVGLLKGVASILGRFPPERIKTDMKK
LCLSQVRNLQKLMEENAPIEKNTKTDPVVWLDRLAAIFRNVNPIVQNGEQHPCQEVVMEV
WPTLSMTFQRYSSDLRVMEHCCRSLRFAVRCVHQQSAPLLSPLVEQIVGLYATHGHSCFL
YLGSILVDEYAGEPGCVIGLLAMLEAFTQPTFVLLTQPSGFRNHPDTVDDWFRLCARFLQ
RAPVAFLQCSALNTILECGLQACMLDHKDANAAVLKFFQDLVEAGRKHEDRPDFETRRTL
VVNIFNTHGENLVSNLITAAIFILPQYMHHDVAETFYQIMQFDRPKFCLWLEAKLKVLPT
KNSGGVEAVTQAQLVEFHKAVTQAERTKEITRALVEFSRFFS
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atggaggtggacataaatgaggtgttggtggccatcgacacgttgtacgacctccagcct
caggatagacagaaacacgaccaggcttcgcaatggctcgggcagttgcagagatcggtc
caagcatggaaagtagcagatcagttgctacacacaaaacgcgatgtcaattcctgcttc
tttgctgcgcagacactccgtaccaaaatacagctatacttcggagaactaccagtggaa
gctcatgcctccctgcgggcttccatgctagaacacttatgccacatcactgagcataca
taccagggcatagcaacgcagttatgtgtggccctggctgatctagcccttcacatggca
tcatgggaggaccctataggtgacttgatatctcagttggggccaggagccagctctccc
aacttggtacctttacttgaagtcctcatagcactcccagaagaattacactccaggcag
ctacgactaggtctcaataggagaaagcaactagatgaatactttcgaaggaaagttcct
agtattatagaattactgcatgttgcagtgggtactgaaggagccagtaaagaaagcacc
catctaaaagcattgaggtgtcttgcttcctggtttaatatccacaccgaaaagtgggta
atgctcactaacacctgccttgttaacgacattcttagtgttgtacgtaatccacaagtg
tctccaaggttacacgaaattgcgacggactgcatctgttccgccatgatcatgctggag
gcagagcggatccagccacttgcagaggttttatttgcaggcgtcctgcaacttggtgaa
ccttatcatttagcagtagctctggaagatctgaatgctatcaccaactatgctagaatt
ttctctgaacttggagaaactttggtcgaggtgatggttgatcagccagggcaggggatg
ggatctcttcaggttctgcatctgcttctcacttgtattggacatcatgactgggaggtt
gctgagatcaccttcaacttttggtacaaattatcagaagtattgtatcgaaagaattgc
gacaatgtgaatgaacagttcaagccctatgttgagcgtctgatagaagctttgtaccgg
cactgtcaaattgaacctgaccatgagaatattttgttacaacaagacgatttctatgaa
tttcgggagcgtgtacaggaactgatcaaggatgtagtattcatatgtgggtcgaagcca
tgtttccagcagatgtcgaatatattgcaagccccagatgtcacgaaaagttggaacctt
cttgaagctgcacttttcattatgcaaagtgtagctaagaaccttgtcccaaggattgac
aataatctaatggtacaatctcatcccagggaggagaatgaggtggttccacctatttta
gaagcagttttaaagcagccagatgaagtgcacatgcaagtggcatttacatcggtccag
ctgctagcagaattgaatgagtggattgcctgtcaccctgacgtccttccgcttgttctt
cagttcctcaccaaaaggctacacaataaacacctagccacggttgcagctaaggcctta
gatgcaatatgtcagagttgtcgtgaccatattgagcagcattttgaaggactgatgcaa
atcatagaatctctcgattcatttagcataagcaatgaagctgtggtaggacttctgaaa
ggtgttgcatcaatacttggtagatttccgccggagagaataaaaacggatatgaaaaag
ttatgtttatctcaagttagaaatttgcaaaaactaatggaggaaaatgctcctatagaa
aagaatacgaaaactgaccctgtagtgtggctggatcggctagcggcaatctttagaaat
gtaaatcccattgtacagaatggagagcagcacccatgtcaagaggttgtaatggaggta
tggcctactctctccatgactttccaaaggtatagctcagatttacgggtaatggagcat
tgctgtcgtagtttacggtttgcagtgcgttgcgtccatcaacagtcagcaccgctcttg
tcacctcttgtagaacagattgtagggctatatgcaactcatggccacagctgtttcttg
tacctgggtagcattttagtggatgagtatgcaggagaacctggttgtgttatagggctg
cttgccatgcttgaagcctttacgcaaccaacttttgtactccttacacaaccaagtgga
tttaggaatcatcctgacaccgttgatgactggttcagattatgtgccaggttcttacaa
cgggctccagtcgcattcctgcagtgttctgccttaaatactattcttgaatgtggtctt
caggcatgtatgcttgatcacaaagatgcaaatgcagctgtgctaaagttcttccaagac
cttgtagaagctgggaggaaacacgaagatcgaccagactttgaaactagacgaacgctt
gttgtaaatattttcaacactcacggagagaatctagttagcaacctaattactgcagct
atctttatcctcccgcagtacatgcaccatgatgtggctgaaacattttaccagattatg
cagtttgaccgtccaaaattctgcctgtggttggaagccaagttgaaagtcctaccaaca
aagaactctggaggtgttgaggctgtaacgcaagctcagctggtggagttccacaaggct
gtcacacaggcagagcgcaccaaggagatcacgcgagcactcgtagaattctcaaggttc
ttcagctga
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