Penaeus vannamei (Pacific white shrimp): 113822999
Help
Entry
113822999 CDS
T06111
Name
(RefSeq) cytoplasmic dynein 1 intermediate chain isoform X49
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Pathway
pvm04145
Phagosome
pvm04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
113822999
09142 Cell motility
04814 Motor proteins
113822999
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pvm03036
]
113822999
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pvm04812
]
113822999
Chromosome and associated proteins [BR:
pvm03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
113822999
Cytoskeleton proteins [BR:
pvm04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
113822999
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
WDR55
Dynein_IC2
WD40
Beta-prop_RIG_2nd
Beta-prop_EML
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_CAF1B_HIR1
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
Beta-prop_NUP159_NUP214
WD40_RFWD3
WD40_MABP1-WDR62_2nd
Beta-prop_IP5PC_F
Beta-prop_SPT8
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
113822999
NCBI-ProteinID:
XP_027231375
LinkDB
All DBs
Position
32:1727806..1779093
Genome browser
AA seq
740 aa
AA seq
DB search
MMSQGVGISAMDRLRVDSPDRKTMWKEEKERKLAKLKQLRAEREKRRRDQLSREAQEAAV
RASNAPRDDQQDLDKMLSSLGVAPVSDKDKDKSSGQTEETRSINLPVEEQSATKSGQTEV
LSSMSSMSSEPGQDLTGSPDKSLEGNATASPRTPSKRPPQLSVVSVQATNIPPRETVTYT
KGVQTSSSGDGHGYYEDWWRPRKAHAFDYYDEYNLNPALEWDDEFTVLTYDDPQAEEEDN
SLTMLDTPPMFGGGHNRHLPPGILPTGMPQVQDVKPALAPEAEKKVEEEKPKPPRELSDE
EKQMLMMTEEFHSFFDHSTRIIERALAEDTNIFADYSHDHEEDGEANENGGVKLSLNRWF
YDERWSRNRCITCMDWSPQYPELLVTSYNNNEDSPHDPDGVALVWNTKFKKETPEYIFHC
QSPVMSATFARFHPNLIIGGTYSGQIVLWDNRSQKRTPVQRSPLSASAHTHPVYCMKVVG
TQNAHNLISASTDGKMCSWSLDMLSQPQESMELQHKQSRAVAVTSLAFPHGDVNNFIVGS
EEGAVFTACRHGSKAGIVDAYEGHQGPVTGVSTHATLGPIDFSHLFLTSSIDWTVKLWSV
KETKPLYSFEDNGDYVYDVAWSPIHPALFTAVDGSGRIDLWNLNQDTEVPTASTYVDGNP
ALNRVSWTNSGQQITVGDDMGKIWIYDVGEQLALPRADEWARLVHTMGELKNNQADDDQS
TRHYDSSFSSLTSLASSPLR
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcgcaaggcgtcggtataagcgcaatggatcgtctgcgtgtggattcaccagat
cgaaaaactatgtggaaggaagaaaaagagcgtaaacttgccaaactgaagcagctgcgt
gcagaaagagagaaacgacgaagagaccaactgtctagagaggctcaggaagcagctgta
cgtgcgagcaatgcaccgcgagatgaccagcaggatttggataagatgctctcctccttg
ggagttgcgcctgtctcggataaagataaagataaaagcagtggtcaaactgaggaaact
agaagcattaatctgccagtagaagaacaatctgcaaccaagtctggtcagacagaggtc
ctgtcgagtatgtcgagcatgtcctccgagccgggacaagacctaacgggttcgccagac
aagagtctagaagggaatgccacagcttcgccaagaacaccgagcaagaggccgccacag
ctctcagtcgtaagtgtacaggcaaccaacatccctcctcgtgaaacggtgacatacact
aagggggtgcagacctcatcgtcgggtgatggccacggttactatgaggattggtggagg
ccacgcaaagcccatgccttcgactattacgacgaatataatctaaacccagcgctagaa
tgggatgatgaattcacagttcttacttacgatgacccgcaagctgaggaggaggacaac
tccttgaccatgcttgacaccccaccgatgttcggaggagggcacaaccgccaccttccc
cctgggattcttcccacgggcatgccgcaggtgcaggacgtcaagccggccctcgccccc
gaagctgagaagaaggtcgaggaggagaaacccaagccaccccgtgagctgtcagatgaa
gagaagcagatgttgatgatgacagaggagttccacagcttctttgaccactcgactcgt
ataattgagcgagcccttgcagaggacaccaacatcttcgcagattactcgcatgaccac
gaagaggatggtgaagcaaatgagaatggaggtgtcaagttgtccctgaatcgctggttc
tatgatgaacgatggtcacgcaatcgctgtatcacttgcatggactggtctcctcagtat
cctgaactccttgttaccagctacaacaacaatgaggactctcctcatgaccccgatggt
gttgcccttgtgtggaataccaaatttaagaaagaaacaccagagtatatcttccattgt
cagtctccagtgatgtctgcaacatttgcaaggttccatcccaatttgatcattggtgga
acttattctggacaaattgttctctgggacaaccgtagccaaaagagaactccagtccag
cgcagtcccctgtctgcttcagctcatactcatcctgtgtactgcatgaaggtggtaggc
acccaaaatgcccacaatcttatcagtgcaagtactgatggaaagatgtgttcctggtcc
ttggacatgctatcacagcctcaggaatcaatggagctccagcacaagcagtcacgtgca
gtagcagtcacatctttagccttccctcatggagatgtcaataactttattgtgggttct
gaagaaggagctgtatttactgcttgccgccacggaagtaaagccggcatagtggatgcc
tacgagggacaccagggcccagtgacaggtgtgagcactcatgctaccctgggacctatt
gacttctctcatctcttcctcacttcatcaattgactggacagtcaagctttggtctgtt
aaggaaacaaagcctctatactcatttgaggacaacggcgactatgtatatgatgtggct
tggtcacccatccatcctgctctcttcacggctgtggacggatcaggaaggattgacctc
tggaatctaaaccaggacacagaggttcctacagcaagtacctatgtcgacggtaaccca
gctctgaatagagtgtcctggactaactctggtcaacagatcacagttggtgacgatatg
ggtaaaatctggatctatgacgtaggagaacaacttgcacttccacgcgcggatgaatgg
gctcggttggtgcacactatgggagagctgaagaacaaccaagcagatgatgaccagtcc
acgaggcactacgactcctcgttctcatctctaacctcattagcgtcttcccctcttaga
taa
DBGET
integrated database retrieval system
