Penaeus vannamei (Pacific white shrimp): 113823005
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Entry
113823005 CDS
T06111
Name
(RefSeq) AT-rich interactive domain-containing protein 5B isoform X1
KO
K25857
AT-rich interactive domain-containing protein 5
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvm03000
]
113823005
Transcription factors [BR:
pvm03000
]
Eukaryotic type
Helix-turn-helix
ARID
113823005
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARID
Motif
Other DBs
NCBI-GeneID:
113823005
NCBI-ProteinID:
XP_069985032
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All DBs
Position
13:complement(9944311..10183731)
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AA seq
1026 aa
AA seq
DB search
MTNHKIQFVGSPCGHHGNYTFYKAFKYTLHGKQRILSLGEFFFVRIWEEEDIVSVGEAQL
LWEDRSSGQILVSLRIYFLPENTPDGRCEEHGEHEVVSLSEKVVLRAEDVIGWMRAAGGV
KWDRGLLGVYCPPTQDTNAPTDAHYTPPISGALDIKEIMREKKLIGDVVEPNSLHIIILA
FDKYCRMRALLKRLEGVEEEFMRSRIIVALGGFVVPSRRTRMLFCRDVFDYPELEGHDLL
CNHLFDASNESLLPFSAAPKLQGRPRKKRKKPTDSESESSEASEDIRPRLKGKPGLTAKP
NGLRVLDRKSTSRSHLSQVKSDFSTPALNRLIEVDFMSKLHKFMKDRNTPITRLPHIGYR
QLNVFELFTRVQQLGGFDAVSEKKLWKLLYDEMSGSTTSSSSAANPPQNAQSFSSIMKRH
YERLLLPYEKFLLQEQKKLLGIGATKSSKVKSEPGEPSVSILQQHVPSDNKPSLKLGGTC
PKLLPPHVPPGHHGGAQEAHGLPSGPLTGPLGAAPTVGTPPQASPAPPASVSPPTTPTEL
TVPKVNTKKEGNIPADLAKRPEITITPIPRSHTGLGPAQMPGPLPAGLSPMPPGLKGLQL
ADLITLEGLKTTFGMTALQDLAKIAESNLLYDRYEKPLQEPAPKKLKTEDGARVNGASSR
DRGNGRPSVIQETPVSKAPLPAVPGLVSADMLRQMNLLDSKLLLPAHQSNKTTISALAQL
LPQTSIFPAPAPVAHQHQHHLPKSPRDPIRLEPPRVFQSQSVYSQSKHMYGKPTADVSKD
VNKDTNKSSSPEIEILDLSRASGNKNGKSTKTERPEIELLDLSTRRDITVSAVSKPGTSK
NCNTSRIPPPHVSIKSSDHPGKQSPMKHLPPTSSAPSVAALAAATAQGLPPGLAGLQLNP
AALLPYLPMLSQAVKPGSGAGGSPMSMFPYVDPGALAAYYSMLPPGLIPTTSSGGGGSGG
SAAAQHIAATQLHLSSLGLSGLSGLSPDALASLGMYKNFLPQGNLPAPHFLSGLMSPHNH
NPPTSK
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atgactaatcacaagattcagtttgtgggctcgccctgtggccaccacggcaattacacg
ttctacaaagctttcaaatacacactccatggcaaacagcggatattgtccttgggcgag
ttcttcttcgtcaggatctgggaggaggaagacatcgtgtccgtaggcgaggctcagtta
ctgtgggaggatcgctcttccggacagatcctcgtctcgctcaggatctacttccttccg
gagaacacgccggacggaagatgcgaggaacacggagagcacgaggtggtgtccctgtcg
gagaaggtggttttgcgggcggaggatgtgatcggctggatgcgggcggcgggcggcgtc
aagtgggacagaggcctcctaggcgtctactgcccgcccacccaggacaccaacgcgccc
acggacgctcattacacaccgccaatctcaggggcgctggacatcaaggagatcatgaga
gagaaaaagttaataggtgatgtggtagaacccaacagcttacacataatcatcctcgcc
ttcgacaagtactgccgcatgcgggcgctgctcaagcgcttggagggggtcgaggaggag
ttcatgcgcagtcgaatcatcgtggcgctgggcggcttcgtggttccctccagacgcacg
agaatgctcttctgcagagacgtcttcgactacccagaattagaaggccacgacctatta
tgtaatcatctcttcgatgcaagtaatgagtcccttctccccttctccgcagcgcccaaa
ctgcaaggacggccgaggaagaagcggaagaagcccacggactcggagtcggaatcctcg
gaggcgtcggaggacatccggccgcgcctgaaggggaagccggggctcaccgccaagccc
aacggcctccgtgtcctcgaccgcaagagcacctcgcgctcgcacttgtcgcaggtcaag
agcgacttctcgacgcccgccttgaatcgtctaatagaggtcgacttcatgtccaaactc
cacaagttcatgaaggaccgcaacaccccaatcaccagactaccacacataggttacaga
caattgaatgtattcgagttattcacaagagtgcagcaactaggtgggttcgacgctgtg
tccgagaagaaattgtggaagctcctgtacgatgaaatgagcggctcgactacctcctcc
tcctccgcagccaatccaccacaaaatgcacagtcattctccagtatcatgaagcgtcat
tatgaaagactactactgccatatgagaaattcttattacaagagcagaagaagctgttg
ggcatcggagccaccaagagcagcaaggtaaaatcagagccaggagaaccctccgtttcc
atcctccagcagcatgtgccaagtgacaacaagccctctctcaagttggggggaacctgt
cccaagctgctacctccccacgtacctcctggccaccatggtggggcgcaggaggcacat
gggttgcccagtgggcctctcacagggcctttaggtgctgcgccaactgtgggtacacca
ccccaagccagccctgcgccaccggcctctgtcagtcctccaacaacaccaacggagctg
acggtgcccaaggtgaacaccaagaaggagggcaacatccccgccgacctggccaagcga
ccagaaatcaccatcactcccatcccgcgatctcacacggggctcgggccggcgcagatg
ccaggccccttgccggccggcctgtccccgatgcccccggggctcaagggcctccagctg
gctgatctcattaccctggagggactcaagaccaccttcggcatgaccgcgctgcaggac
ctggccaagatcgcagagagtaatttgctttatgacagatatgagaagcctctgcaggag
ccggcaccgaagaagttgaagacggaagacggtgcgagggtgaacggtgctagttcgaga
gaccggggcaatggacggccatctgtgatccaggaaactccagtcagtaaggcgcctctg
cctgcagtgcctggacttgtctctgcggacatgttgagacagatgaatctcctcgattcc
aagctactccttccagcacaccagagcaacaagacaacgatcagtgcgctggcacagctc
ctcccccagaccagcatcttccccgcgcccgccccggtcgcgcaccagcaccagcaccac
ctgcccaagtcgccgagggacccaatcagactggagcctcccagggtgtttcagtctcag
tctgtgtattcccagtccaaacacatgtatggaaaaccaactgctgatgtcagtaaggat
gtgaataaagacaccaataagagttctagtccagaaattgaaattctggatcttagtcgt
gcatcaggaaataagaatggaaaatctacaaagacagaacggccagaaatagaactatta
gacctgtcaacgaggcgtgacataaccgtttcggcagtttctaaaccaggtactagtaag
aactgcaataccagtaggattcctccccctcatgtaagcattaaatcatcagatcatcca
ggtaaacagtcacccatgaaacacctaccaccaacaagcagtgcgccatccgttgcagca
cttgcagcagcaacagctcagggcttgcctccaggactagcaggtcttcagctcaatcct
gctgcactactcccgtacctacccatgctttctcaagcggtcaaaccaggctcaggagct
ggaggctcgcccatgtccatgtttccctacgtggaccctggagcccttgctgcttattat
agtatgctgccccccggtttaattcccaccaccagtagtggcggtgggggcagcgggggt
tctgcagcagctcagcatatagcagcaactcagttacacctcagctcattagggctttct
ggattgtcgggtctatcgccggacgctctagcaagcttgggcatgtacaagaacttccta
ccccaaggaaaccttcctgccccacacttcctctcgggtctaatgtctccacacaaccac
aatccacccaccagcaagtaa
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