Penaeus vannamei (Pacific white shrimp): 113823014
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Entry
113823014 CDS
T06111
Name
(RefSeq) protein shuttle craft
KO
K12236
transcriptional repressor NF-X1
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvm03000
]
113823014
04121 Ubiquitin system [BR:
pvm04121
]
113823014
Transcription factors [BR:
pvm03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
113823014
Ubiquitin system [BR:
pvm04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
NFX1 proteins
113823014
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-NF-X1
R3H
FliG_C
Motif
Other DBs
NCBI-GeneID:
113823014
NCBI-ProteinID:
XP_069976492
LinkDB
All DBs
Position
Unknown
AA seq
782 aa
AA seq
DB search
MEQLMKGVYECMVCCDRIKQHHAIWSCVNCYNCFHLGCIKKWAKSSSGDSGWRCPACQAA
TPKVPNAYLCFCGKLREPEWNRRDTPHSCGEVCGRGRKIDWCNHKCNILCHPGPCPPCTA
YVKKTCPCGAKSQDVRCSITEPFVCEGVCGKVLNCGGHTCEKLCHSGPCGDCQQEVMQKC
YCGKESREVLCTEETCGISLFACEKKCSRKLDCGIHICIETCHEGECKPCARAISAITRC
PCGKVPLEKLYERDGAIQRKSCSDPIPTCSQPCQRTLKCGVPGSYHECQALCHEGPCPPC
PLETPVKCRCGAMDQNVLCSELTAKADEVTCKKPCKKMRQCSRHKCSTKCCIDVDHLCTL
VCRRTLSCGLHKCQELCHRGNCPRCWQTSFEELTCHCGAAVLYPPVPCGTKPPPCERPCS
RPQSCTHKATHNCHPDDTCPPCTILVDKPCFGNHKTMRSTPCYLKAVSCGAICGFPLPCG
LHKCIRVCHEAPCVPSGTLCTQKCMKPRENCGHPCSNPCHSGPCPDNSCKEMVKITCTCG
HRKTMLQCSENDREYRALATSLLASQMQNMNNGSTVDLTDIFTSTTRPDKLKRLHCNDEC
IQIERNRRLALALQIENPETRDKLGNASVLFSDFMKDEARKDPNLAKMVHDALTDLVLKA
KESKQKSRSHSFAPMNREKRQFVHEYCEHFGCQSQSYDDEPKKNIVATAVKGMCFIPPIS
VLTLVQREQGQKKVPVPVWSRKATAEDSRQGMKKLEKSSSIEKETESATAKAPPIDYFDF
ED
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atggagcagctgatgaagggagtgtatgagtgcatggtctgttgtgaccgcatcaagcag
caccacgctatatggtcctgtgtcaactgttacaactgcttccatttaggatgcataaag
aaatgggcaaaaagttctagtggagactctggctggaggtgtccagcctgccaagcagcc
acgccaaaagttccaaatgcctacctctgtttttgtggcaaattacgtgaaccagagtgg
aaccgacgtgacacaccacattcatgtggagaggtgtgtggtcgaggaaggaagattgac
tggtgtaatcataagtgcaatattctatgccatccaggaccatgccctccttgcacagca
tatgttaagaaaacctgtccttgtggagccaaaagtcaagacgtgcgctgtagcatcacg
gagccctttgtttgtgagggagtgtgtgggaaggtgctgaactgtgggggccacacttgt
gaaaagctatgtcattctgggccctgtggtgactgtcagcaggaagtaatgcagaaatgt
tactgtggaaaggagagccgagaagttctatgtacagaagagacctgtggcatttccttg
tttgcatgtgagaaaaaatgtagtcggaagttagattgtggaattcacatctgcattgag
acctgtcatgaaggagagtgcaagccttgtgccagggccattagcgccatcaccaggtgt
ccttgtggcaaagttccactagagaaactatatgaacgagatggagcaattcagagaaaa
tcttgctcagatcccatacccacctgtagccagccttgccagcgcacactgaaatgtgga
gttcctggctcctaccatgagtgccaggctctgtgccatgaaggtccctgccctccctgc
ccccttgagacaccagttaagtgccgatgtggagcaatggatcaaaatgtcttgtgctcg
gaactcactgccaaggctgatgaagttacctgtaaaaagccatgtaaaaagatgcgtcag
tgtagccgacacaaatgtagcaccaaatgttgcattgatgttgaccatctctgcacactg
gtgtgcaggaggacactgagttgtggccttcacaaatgccaggagctatgtcatcgtggg
aattgtccaagatgctggcagacaagttttgaggagctgacatgccactgtggtgcagct
gtgctgtaccctcctgtgccttgtggaaccaaaccaccaccatgtgaacgaccttgtagc
cgcccacagagctgtactcacaaagcaactcacaactgtcacccagatgacacttgcccc
ccttgtaccatcttggttgataagccctgttttggtaaccataagacaatgcgaagcaca
ccgtgttacctgaaggcagtgtcatgtggtgccatctgtggctttcctctaccctgtggc
ttgcataagtgcatacgtgtgtgtcatgaggccccttgcgtcccttctggaaccctgtgc
acgcagaagtgcatgaagccgcgagagaactgtggacatccctgctccaacccctgccac
agtggcccctgtcctgataattcgtgcaaggagatggtaaagattacttgcacatgtgga
caccggaagaccatgctgcagtgttcagagaatgatcgagagtacagggctcttgcaact
tcattacttgcatcgcaaatgcagaacatgaataatggaagtactgttgacttgactgat
atctttacttctacaacaagaccagataagttaaaaagacttcattgcaatgatgagtgc
atacagatagagcgcaatcgccggcttgcattggctcttcagatagagaatcctgaaact
cgtgataaacttggaaatgcttctgtgctcttctctgattttatgaaggatgaagcgcga
aaggatcccaaccttgcaaagatggttcatgatgcgctaacagatcttgtcctcaaagca
aaggagtcaaagcagaagagtcgcagtcattcctttgctccaatgaacagagagaagagg
cagtttgtccatgaatactgtgagcattttggttgccagagtcagtcctatgatgatgaa
cccaagaaaaacatagttgccacagcagtcaaaggaatgtgcttcatccccccaataagt
gtgttgacgcttgtgcaacgggaacagggacagaagaaggttccagtgccagtgtggtca
cgtaaggcaacagcagaggacagtcgacaagggatgaagaaactagagaagtcaagcagt
attgagaaagagacagagagtgcgacagcaaaggcccctcctatagattattttgacttt
gaagattag
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