Penaeus vannamei (Pacific white shrimp): 113823021
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Entry
113823021 CDS
T06111
Name
(RefSeq) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Pathway
pvm03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
113823021
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pvm03400
]
113823021
Enzymes [BR:
pvm01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
113823021
DNA repair and recombination proteins [BR:
pvm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
113823021
Prokaryotic type
113823021
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-GeneID:
113823021
NCBI-ProteinID:
XP_027231417
LinkDB
All DBs
Position
Unknown
AA seq
347 aa
AA seq
DB search
MIARLSRLLRKNLIFGPSNNSPPPLFAHRREMATQKLIANFFKPVNKRVSGETQDTQVAK
KPKIAEEKENAEEGNNAPGSPTRSSAPELNTCLSPEQKDRMQKNKLKAEIKQTSRKFVAL
HENIGTSWFSALKTEFSKPYFEKLSLFLDGERKRSTIFPPAEQVYSWTHHCELRDVKVVI
LGQDPYHGPRQAHGLCFSVQKGVPPPPSLLNMYKELESDIEGFERPSHGHLIGWAKQGVL
LLNACLSVRAHNANSHKDQGWEKFTDSVIKAVSDRNKGVVFLLWGSYAQKKAAVVDKKKH
HLLNTTHPSPLSAHRGFLGCKHFSKCNEILKKQGKKPIDWNYLPLEM
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgatcgccagactctctcgcctccttcgcaaaaacctaattttcggcccaagcaataac
tccccgccgcccttattcgcgcacaggagagaaatggcgacgcagaagctgatcgctaac
tttttcaagccggtcaacaagcgtgtgagcggagagacgcaggatacgcaggtggcaaag
aagccgaagattgcggaagaaaaggagaatgctgaggaaggcaacaatgctccaggctct
ccaacaagatcatcggcacctgagttgaacacctgcctcagtccagagcagaaagaccgt
atgcaaaagaacaagttaaaggctgagataaagcagacaagcagaaaatttgtggctctc
catgagaatattggaacaagttggttttctgctttgaagactgagttttctaaaccttat
tttgagaagcttagccttttcctggatggcgagcgcaagaggtcaacgatctttcctcca
gccgaacaagtatattcctggacacaccactgcgagctgcgtgatgtgaaagtagttatc
ttaggccaggatccataccatgggccaaggcaagctcatggtctctgctttagtgtccag
aagggcgtaccaccacctccaagtttgttgaacatgtacaaagagcttgaatcagatatt
gaaggctttgagcggccttctcatgggcatctaattggctgggcaaaacaaggcgttctg
ctcctcaacgcttgcctgtcagtccgtgctcacaatgccaattcacacaaagaccaaggc
tgggagaagttcacagactcggttatcaaggcagtgtcggatcgcaacaagggcgtcgtg
tttctcctgtggggttcttatgcacagaaaaaagctgctgttgtagataagaaaaaacac
cacctcttgaacacaactcacccgtcgccactctcagctcatagaggtttcttgggatgc
aagcacttctcgaagtgtaatgaaattctcaaaaaacaaggcaagaagcccattgactgg
aattacttgcctctagaaatgtaa
DBGET
integrated database retrieval system
