Penaeus vannamei (Pacific white shrimp): 113823043
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Entry
113823043 CDS
T06111
Symbol
faf
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 9X isoform X1
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pvm01002
]
113823043 (faf)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvm04121
]
113823043 (faf)
Enzymes [BR:
pvm01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
113823043 (faf)
Peptidases and inhibitors [BR:
pvm01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
113823043 (faf)
Ubiquitin system [BR:
pvm04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
113823043 (faf)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARM_UBP24_USP9X-Y
DUF3517
UCH
UCH_UBL1
UCH_1
FAST_1
eIF-3_zeta
DUF4239
Motif
Other DBs
NCBI-GeneID:
113823043
NCBI-ProteinID:
XP_069980411
LinkDB
All DBs
Position
8:complement(10427472..10485773)
Genome browser
AA seq
2677 aa
AA seq
DB search
MTIAMIANQDPQEGPPNTPPQGGDGEVLGEGEGEEMGAGEPDFPLAALARLDEMIHRQRW
VVPVLPKCELELLLDASIDLCTRGLDTRSEACQRFFREGLTISFTKILTDEAVNSWKFEI
HRCILKNCEKLIELVVVKLHQDWFPLLDLLAMVLNPNSKFHTFNGTRPSETVPQGSQIPD
SELFARPPDPRNPRGWLVDLINLFGKHGGFQILLERFQSGKNLSVPVICALLRPFGQCYE
MLTIPTIEKYFMSIVEVVPAFLENLTDDELKKEAKNEAKNDALSAIIKAIKCLVSRVPSQ
EETAKNLEIFRLKMILRLLQISSFNGKMNALNEVNKVITNVSYYSHRHGPFEEEEWLTAE
RMAEWIKENRVLQIVLRDSLHQPQYVEKLEKIIRFIIKEKALTLEDLDDIWAAQHGKHEA
IVKNVHDLLAKLAWDFSPEQLDHLFGCFQTSWSQASKKQREKLLELIRRLAEDDKDGVMA
HKVLTLLWSLAHSDDVPTEIMDQALNAHVKILDYSCSQDRDTQKKHWLDRCVEELKHDKW
VLPALKQIREICCSYSEAPPNFSQHQRPTPHVSYRHDVISKLQNQHSLVVLVADNLTTYM
KNIRLAAKENPDLNPAEIIPDGRYNHICQVQERLNFLRFLLKDGQLWLCAPQAKQIWNCL
AENAVFTVDRESCFKWFSKLMGDEPDLDPEINKDFFENNILLLDPSLLTENGMKCFDRFF
KAVNSKEGKLVLKKRVYLMDDVDLIGVDYVWRVVLCGTEDIASRAIELLRETFTNLGPRL
QANQVIIHDDFLSSCMSRLKAMYDTVSVLDRDKDSVNRIRQETTRMCRVLKVLYEYVSEC
DGDFGDDRSILPLGRSSRGKHLSLLVRFPVQGRQPDELDVWTHTNDTMGAIRRQVLHRLK
STAPNVKVELYLNTDPIDPVDDKKIIAHMPLRDKMVLTAKLVQVGSNMPSSPDSSSDSST
GSPQHPYEGPNVDAENCLPGVIMSGQAKYTQFLLQLADLGCTLQLPQLRDSARALLEIMP
ADQYTVNNLRTLCMEHAKIGDQNMSPSLESIVFSPSPSQVLYNLQVLYSLLMPAHNPMSE
KAHEFQYNFMKSGGVKLIIDMLSKNNFLSNTDMPTKRSAFLVVLKLAKLAFVTVGYAIVG
VVAGAVTSSGTATTGSNGGSEGSSPSGGGGLAASTHTQALVLQEALHHIPNPASDCMVRN
VASRLAQSLHDQVTITSCLWAHFVTGVVPDMSVVRAILKITWASAAGQGHLITSSLDEIE
KAAERPPTKPPDPEDLCVCREGLETLSVVLALYPPALETLTKDTQFHKLVMGLVLVGGER
SIRQCAVEQLLLMATKCSNSPHTLVVFIVMLFNVLNGLNSEYSKEYFQLLCGLLNWACVS
SVTVTGVDRLLTTEVEWLKNVRASVAQMAQGGPEPPVDETLLEGHLCVTRELVAFLPPEK
KYEIGGDPSKGIFLIRELVEDFIFPFSKVYLQLEHAAEMPAEQAIPVCSTQPTVIAAYEL
LVTLCTGCVPNLRLLAEMLTNMYYSDCDESIGEWEYLPPVGPRPMKGFVGLKNAGATCYM
NSVLQQLYMIRQIRHGVLAVEGAATDPEEDFSGEERMEQETNLDGNEDDAMSSSSNEESR
KEYHIGILKQVQAIFAHLACSKLQYYVPRGLWKHFKLQGEPVNLREQHDACEFYNILVES
LNEALKALGHEQIMNKILGGSYSDQKICKTCPHRYSREETFTVISIDIRNYSNLYDSLEQ
YVKGDLLEGDNAYLCEKCDKKVDTVKRICLKKLPPILAIQLKRFDYDWERECSIKFNDYF
EFPRELDMDPYTVAGLARNGELIDYDPEDMKTVICSKYKLTGIVVHSGQASGGHYYSYIL
HRNGNDQRWYKFDDGEVTECKMDDEEEMKNQCFGGEYMGEQVFDNIMKRVSYRRQKRWWN
AYLLFYTRLDVEEDNLCNSINELSIAERPGLIKMPSAIERSVVRQNVRFMHSRSQFSPEY
FQFLKKLILTNQPYVLPAPQDRIVESEEIAMISTQLCSKFLFSVGLHTKKTLRGPAPEWY
DALQVHLRASVHTRAWFAQQILFAQPHRFVEYLLECPAPEVRMVFSKLIVLVAHCARNDG
PQPLGWGPLKHHPGLDMASGSCTLSDQLLVAVLQLLNKDVSEHGRHLTQYFHLFNLYASL
GPPEKLQLLKLNVVEMFMLVALDEGPGPAIKYQYAELGRLYQVVSQLIRSCDVSQKQQSS
QPNTAPLPNPHGDPACAEPLMPIQPKVVEILYGRATYVKKIIEDANSSEDTVKLLKFCCW
ENPLFSSTVLSELLWQIAYSYTYELRPYLDLLLHMLLLDDSWQNHRIHNALKGIPDDREG
LFDTIQRSKNHYQKRAYQCIKCMVALFSSCPAAQQMLHSNGDLKRKWTWAVDWLNDELDR
RPYAAANQQYGFSNWSPPAQSNETSNGYFLERSPSARSTLEKAYELCPEDEPEAEEGEEA
EVAVPEEVAPLPPVSDPVQLQQQQQQQQQQQQQQQQQQQQQQQQQQPQQQQQQQQQQPQQ
QQPGQQQQQPQQKLPPTSGPQPCSSQLNSTKDSPVSTQNRSHSGGSLTVNSGNSSNTSIG
DSSAPNNPSTTAAATTIGGAPTASTTTTTNTTSSQGGNQTTTTSINTSISSITSSSSSSS
TTTNSTNNVGGTNKTSTPSPQSTPNLPPSMQENPQDN
NT seq
8034 nt
NT seq
+upstream
nt +downstream
nt
atgaccatcgcaatgatagccaatcaggacccacaggagggcccaccaaataccccacct
cagggaggggatggagaagtgctgggtgagggggaaggggaggagatgggagcaggtgaa
ccagactttccactggctgcattggctcggctagatgagatgatccatcggcaaagatgg
gttgtaccagtcttgccaaagtgcgagttggagctgctcttggatgcctccattgatttg
tgcacccgtggtttggacacaagaagtgaagcatgccagaggttcttccgtgagggtctt
actatctcattcactaaaattcttacggatgaagcagttaatagttggaaatttgaaatt
cataggtgtattctcaagaactgtgaaaaattaattgaactagtggtagtgaaactgcac
caagactggtttcccttacttgatctacttgcaatggtgctcaatcctaattccaagttc
cacaccttcaatggaacccgcccctcggagacagtacctcaggggtcccagattccagac
tctgagctatttgctcggcctcctgaccctaggaatcctaggggttggctggtagatctt
atcaacctctttggcaaacatggaggcttccagattctcctagaaagattccaatctggc
aagaatctatcagttccagtgatttgtgctctcctccgaccatttggccaatgctatgag
atgctcacaatacctactatagaaaaatatttcatgtctattgtagaggtagtcccagcc
ttcttagaaaacctcactgatgatgaattgaagaaagaagccaagaatgaggccaagaac
gatgcactgtcagcaattatcaaagccattaagtgcctggtgtcccgtgtgcccagtcag
gaggagacggccaagaacttggaaatatttaggttgaaaatgatactcaggttattgcaa
atatcatcctttaatgggaagatgaatgctctaaatgaagtaaacaaagtgattaccaat
gtgtcctattactcccaccgtcatggaccttttgaggaagaggaatggctgacagcagag
cgcatggcagaatggatcaaggaaaatcgtgtcctacagatcgtattgcgtgattcactc
catcagcctcagtatgtagagaagctagagaagatcattcgctttatcattaaggagaag
gctttgactctagaggatctagatgatatctgggcagcgcagcatgggaaacatgaggcc
attgtgaaaaatgtgcacgatctcttggccaagcttgcatgggatttttccccagaacaa
cttgatcacctttttggatgcttccagacaagctggagtcaagctagtaaaaaacaacgt
gagaaactcttagaattaatccgaagactagcagaagatgacaaggatggtgtcatggct
cacaaggtattaacattgctgtggtccttagcacattcagatgatgttccaacagaaata
atggaccaggctctcaatgctcatgttaagattttagattactcatgctcacaggatcga
gacacccagaaaaagcactggcttgacagatgtgtggaggaactcaagcatgataagtgg
gtcctcccagcactgaaacagatacgagagatatgttgttcatacagtgaggctccacct
aacttctcacaacaccagcgcccaactccacacgtcagctaccgtcatgatgttatatcc
aagctacagaatcagcactcactagtggtccttgtggcagataatctcacaacttatatg
aagaacattagactagctgcaaaggaaaatccggacctgaatccagcagaaataattcca
gatggccgatacaaccacatttgtcaagttcaggagcggctaaattttctcaggtttctg
ttaaaggatggtcagttatggctgtgtgcacctcaggccaaacagatatggaactgcttg
gcagaaaatgctgtcttcactgttgacagagaatcgtgttttaagtggttttcaaagtta
atgggtgatgaaccagaccttgatccagagattaataaagatttctttgaaaacaatata
ttgcttctggatccctcgttattgactgaaaatggcatgaagtgctttgatagatttttc
aaggctgtaaattcaaaagagggcaagctggttttgaagaaacgtgtatacctcatggat
gatgttgatctaattggtgttgactatgtttggagggttgtactctgtggaactgaagat
attgctagccgtgccattgaacttctgcgagagacattcactaatctaggaccaagactc
caagcaaatcaagtcattattcacgatgactttctgtctagttgtatgtcccggctaaag
gcaatgtatgacactgtatcagtgttagatcgggataaagactcggttaacagaattagg
caagagactacaagaatgtgtcgtgtccttaaagttttatatgaatacgtgtcagaatgt
gatggcgattttggggatgatcgttccattttgccacttggaagatcgtcaaggggcaag
catttgtcgctcttggtgcggttccctgtgcagggtcggcaaccagatgaactagatgtt
tggactcataccaatgatactatgggagcaatcagaagacaggttttgcaccgtctgaag
tcaacagctccaaatgtaaaagtggaactctacttgaatactgaccccatagatccagtc
gatgacaagaagattatagcacacatgcctctcagagataaaatggtattgacagccaag
ctagtccaagtgggaagtaacatgccatcatctccagacagttcctcagattcttcaaca
ggttccccacaacacccttatgagggaccgaatgttgatgcagaaaattgtcttcctggt
gttataatgtcaggccaagcaaagtatacacaattcctcctgcaattagcagacttgggc
tgcactttacaactaccacaattgagagatagtgcacgtgctcttcttgaaataatgcca
gcagaccagtatacagttaacaatttacgaactctgtgtatggagcatgcaaagattgga
gaccagaacatgtctccttctttagagagcattgtcttttcaccatccccatcacaagtc
ctctataacttgcaggtattatattctctcctcatgcctgcacataaccctatgtcagaa
aaggcacatgaattccagtacaatttcatgaaaagtggaggagttaagctaatcattgat
atgctgtccaaaaacaacttcctttcaaacacagatatgcccaccaaaagatcggccttc
ttagtggtgttgaagctggcaaagttggcatttgtgactgtagggtatgccattgttggt
gttgtagctggagccgtgacttcaagtggtacagccacaacagggagtaatggtggctca
gagggatcctctccatcaggtggtggaggtttggcagcatccacgcacacacaagcttta
gtgctccaagaagcactgcatcacatccccaacccagcctcagactgcatggtgcggaat
gtggcatcgcgtctggcgcaatcgcttcacgaccaggtcactatcacatcatgtctctgg
gcgcactttgtaactggtgtggtccctgacatgagtgtggtcagagctatcctcaaaatt
acctgggcatcagcagctggtcagggccatctcatcacttcatctcttgatgaaattgaa
aaggcagcagagagaccgccaacaaaacctccggatccagaggatctttgtgtgtgccgt
gagggtctggaaacactgtcagtagttctagccctttatccccctgctcttgaaaccttg
accaaggacacccagttccacaaacttgtgatggggttggtgttagtaggcggcgagcga
agcatacggcaatgtgcagtggagcagctcttgcttatggctaccaaatgctcgaactca
ccccacaccctcgtcgtctttattgtcatgctgttcaatgttctcaatggcctcaatagc
gagtactcgaaagaatattttcagctgttgtgtggattgctaaactgggcgtgtgtatca
agtgtgactgtaacaggcgttgaccgcctacttaccacggaggtggagtggttgaagaat
gtcagagccagtgtagctcagatggcccaaggtggaccagagcccccagtagatgaaact
ttgttggaaggccatctctgtgtaacaagggagcttgtagccttcctccctcctgagaag
aaatatgaaattggtggtgatccttccaaaggaatttttctcattagggaacttgtagaa
gactttatattcccattttctaaggtgtaccttcaattagagcatgccgcagagatgcct
gctgagcaggccataccagtgtgctcaactcaaccgactgtgatagcagcatatgaactc
ctagtcactttatgtactggctgtgtccccaacctcagactgctggcagaaatgctcacc
aatatgtattattcagactgcgatgagagtattggggaatgggaatatcttcctcctgta
ggcccacgacctatgaaaggttttgtggggttaaagaatgctggggccacatgttatatg
aattctgtcctccaacagttatacatgatccgacaaataagacatggggtcctagcagtg
gaaggcgcagcaacagatccagaggaagacttcagtggtgaggaaagaatggaacaagag
accaaccttgatggtaatgaagatgatgccatgagtagtagttccaatgaagagagcagg
aaggagtaccatattggtatactaaaacaagtacaagccatctttgcacatctggcttgt
tccaagctccaatattatgttcccagaggactttggaaacattttaaattgcaaggggaa
cctgtaaatttacgtgaacaacatgatgcttgtgaattttacaatattttagtcgagagc
ttgaatgaggctctaaaggcattaggacatgaacaaataatgaacaagattttaggagga
tcatattcagatcagaagatttgtaaaacttgtccacatagatattcacgtgaggaaacc
tttacggtcatcagcatagacatccgaaactacagcaacctatatgactcgcttgaacag
tatgttaaaggagaccttttagagggggacaatgcctacctatgtgaaaaatgtgacaaa
aaggttgatactgtaaaacggatatgtttaaagaaactacccccaattttagcaattcag
ctgaaaagatttgattatgactgggaaagagaatgttcaatcaaattcaatgattacttt
gagtttccacgtgagttagatatggacccatatacagttgctggactcgctagaaatgga
gaactcatagactacgacccagaagatatgaagacagtaatatgtagcaagtacaagttg
acaggcattgtggtccacagtggtcaagcaagtggaggacactactattcatacattctt
cacagaaatggaaatgaccagcgatggtacaagtttgatgatggggaggtgacagaatgt
aaaatggatgatgaagaggaaatgaaaaatcagtgtttcggtggtgaatacatgggcgag
caagtatttgataacatcatgaaaagagttagttatcgaagacagaagcgatggtggaat
gcatacttgctgttctacacacgactagatgtggaggaagataatctctgcaactctata
aatgagctcagcatagcagaacgcccaggattgataaagatgccgagtgccatcgagcga
tcagtggtgcgacagaatgttaggtttatgcattcccgctcccagttttctccagagtac
ttccaattcctcaagaaacttattttgaccaatcaaccttatgtactaccagcaccacag
gacaggattgttgagagtgaggagatagctatgatcagtacacagctgtgcagcaaattc
ctcttttctgttgggttgcatacaaagaagactttacgtggaccagcgccagagtggtac
gatgccctgcaggttcatttgcgagcatcagtccacacccgggcatggtttgctcagcag
atattatttgcccagccacaccgttttgttgaatatctcttggagtgtcctgcgcctgaa
gtacggatggtatttagcaagcttatagtactagtggcccattgtgctcgcaacgatggt
ccacagccactgggttggggacctctcaaacatcatcctggccttgatatggcaagtggg
agttgcacactaagtgaccagttgttggtagctgtgttacagctgctgaacaaggatgtg
tcagaacatggtcgtcatctcactcagtattttcatcttttcaacctatatgcgtcattg
ggtcctcctgagaagttgcagctgttgaagttaaatgtggttgagatgtttatgctggtg
gctttggatgaaggaccaggaccagccataaaatatcaatatgctgaacttggaagatta
tatcaggtggtttcccagttgataagatcttgtgatgtgtcccaaaaacaacagtcttca
caaccaaacactgcaccattgccaaatccacatggagatccagcatgtgcagaacctctt
atgcccattcaacccaaggttgtagaaatcctttatggaagagcaacgtatgttaaaaag
ataattgaagatgctaacagctctgaagacacagtgaagctcctcaagttctgttgttgg
gagaatcccctcttttcttccacggtgctctcggaactcctgtggcagatagcctactcc
tatacttatgagctgcgaccctacttagacctacttttgcatatgctgctactcgatgat
tcgtggcagaaccacagaattcacaatgcactgaaaggtatcccagatgacagagagggc
ttgtttgatactatccagaggagtaagaaccattaccagaagcgagcctatcagtgtata
aagtgtatggtagctcttttctcttcctgtcctgctgctcagcagatgcttcactccaat
ggtgatctaaagaggaaatggacctgggcggtagattggctgaacgatgaattagaccgt
cgaccttatgcagcagctaatcagcaatacggattcagcaattggtctccacctgcacaa
agtaacgaaactagcaatggctacttcttggaacgttcacctagtgctcgctcaacgctg
gaaaaagcctatgagttgtgccctgaggacgagccagaggcagaagagggtgaagaggca
gaggtagcagttccagaagaagttgcaccccttcctcctgtatctgacccagtgcagttg
cagcaacaacagcagcaacagcaacaacagcagcagcaacagcaacagcagcaacaacag
cagcagcagcaacagcaaccacaacagcagcaacagcagcagcagcagcaaccacagcag
cagcaacctgggcagcagcaacaacagcctcagcagaagctaccacctacctcaggacct
cagccttgtagttcccagttaaattcaaccaaggattctccagttagtacacagaataga
agccatagtggtggttcattaacggttaacagcggaaacagcagtaataccagcattggt
gacagcagtgctccaaataacccctcaactacagcagcagcaactaccataggtggagca
cctactgctagtaccaccacaactaccaatactaccagcagtcaaggagggaaccagaca
accaccacaagcattaacaccagcattagtagtatcacaagtagcagcagcagtagcagc
actaccaccaatagcactaataatgttggaggcacaaacaagacctccacgccatcacca
cagtccactccaaatctcccaccctccatgcaggagaacccacaggataactaa
DBGET
integrated database retrieval system
