Penaeus vannamei (Pacific white shrimp): 113823091
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Entry
113823091 CDS
T06111
Name
(RefSeq) nuclear pore complex protein Nup153
KO
K14296
nuclear pore complex protein Nup153
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Pathway
pvm03013
Nucleocytoplasmic transport
pvm03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
113823091
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
113823091
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvm03019
]
113823091
Messenger RNA biogenesis [BR:
pvm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
113823091
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup153
Zn_ribbon_RanBP
Motif
Other DBs
NCBI-GeneID:
113823091
NCBI-ProteinID:
XP_069984465
LinkDB
All DBs
Position
12:<45699623..45721043
Genome browser
AA seq
1502 aa
AA seq
DB search
MASEGPRKYRERRSRSDKPYDRPRGIIRRVTDSVTGLFSSSWLSGWLGAEDEEEGSEQQG
RMAPPKTSTVPPPGESFIFSQPVTARRSFRPIYPEEGETESNSQQSLGVNEGASTSSGMR
MTLPTATSSGLSASTSRSLGSETPSPSIPVRKLPIISSTPAPMFTARTKSHLEPRPLQLL
TSSTPTGDDGSEMSESSIDTGVDASVIPRPDERDYQQEILQLDEESLQTLRDTLTKSAPA
PPAVQPATVLPSLDETRKRPRDVEPDHTSIRAEGSTSSRSLFSEAGEPAIGTPQPSGLAN
KRPRFNVSTYGSPVVGDRSVLSNSTFKSSPFYPGKTMYGGASAYRRNRLQSRTSHQTARV
QVKNKSAESSDDGGLSQAARRILDSLEQMSTPISDAKRIPTPTPGQRGSFLDAAPSYTAS
FYKHRPNLRSAPPTSKLLTPTKLPVQENLSKSFLKPSASPSISTSTAFTSSSSSTLKRTV
EEPRHMEMIIQEEEKEKKNSSSSSSIATVKTKEVSESTTLTSFPAPTPAASSTFSKAAAE
AVSKFKSVPTTTTPLPALSSPGVFKFGLASSNSASKQTQDLVTKAMPVMSDSPQTLKDGG
GKMKSKVVESGRISSKQEEDVVSEESKLPTVPLTLSSLPKINLPLTVPAAGTPASSSGMA
SGFRFSIPEVVDTQAAASETMTNALTFTFSSPALVNEESKATNQSSSSSCSNLSSTMMFN
SSSPSFAPKLKATAKKEAMPKAPKLQAGSILDILKPKGGTPEKLVAGIASPSLQNRIEEK
FNAFGSPKVSSESIKPVVEQTVNNVVEKTSVSQGFEGFGGAFKKSSEEWECSVCMIRNKN
SAEKCVACETAKPGKTSSHGIQTNASVFSNTDPTPTITGNGTDWGSAFKKSSNEWDCDMC
MLRNKDSVDKCVACETPRPGSKAKQAPLAESKPLDGKEEKVNFGFGSAFAKAKGEWECDT
CLVRNKSEATKCISCETPKPGAANISQAITGNFKFGVNTNDSSSTSSSFKFGLDNSQTEV
KSNSGFAFGVSAKSAEDTNSKESSGFKFGIASEKPSLGMDSNSESDKSKEKSASASSGIS
FGLKPDESKGKQFPVPSMNFTFSAPNKPASSTETVNTKPSFTFSSGSETVASFNFGATET
KAKQAAGEGQAKTSTEIKPASEIKSGSVLDVLKVKDTKASEVFNFGAKLEKVDGGVPKPS
FAFNNAVSTSTKAGDSKSTSDPAVPSGTFTFGANGKESSAGSTTVIATTAPLFTFGDKGS
GTSTAPSFAFNTAPAKEESKTTPAFFSGKRENSDSSEPAKKSVFGGSATSINNGVGATPS
LFNFGSKENKLASGPGFSTPSATPAFGAPTPASNATPNFQFGNSNPPAPAATAPPAFGNP
APAFGSPAPAFGSNNNNSTPSFTFGQPPEKKQSTGFDFGQTPSNAPTQGFNFAASTGTPG
VFQFGQSQANSTPSSGLFQFGSGNTPVQPAPSFGGGGDNPFSAPAPPSGRVMKKAVRRTR
KP
NT seq
4509 nt
NT seq
+upstream
nt +downstream
nt
atggcctccgaagggccgcgaaagtaccgggagaggaggagcaggagcgacaagccctac
gacaggccaaggggaataatccggagagtgactgactcagtgacaggtttgttctcgtca
tcttggctctctggatggctaggggctgaagatgaggaagaaggcagtgaacagcagggg
aggatggcacctccaaagacctcaacagtccctcctcctggagagtccttcatcttctcc
caaccagtcacagcgaggaggtccttcaggccgatctacccagaggaaggtgagactgag
agtaacagccagcagtccttgggtgtcaatgagggggccagcaccagcagtgggatgcgg
atgaccctaccaacagccacttcctcgggcctctcagcctccactagcagatcactaggg
agtgagacaccaagtccatcaatccctgtgagaaagctgcctattatttcttcaacacca
gcacccatgttcacagctcgcaccaagagccacttggagccacgtccgttgcagctccta
accagttcaacgcctacaggggatgatggcagtgaaatgagtgagtcctcaatagataca
ggcgtcgatgcctcagtcattccccgaccagatgagagagactaccaacaggaaatactc
cagctggatgaggagtcactgcagacactacgtgatacacttaccaagtcggctcctgcg
ccaccagctgtccagcctgctacagtcctcccttccttggatgagactcggaagagaccc
cgggatgtagaaccagatcacacaagtatacgtgcagagggaagtaccagcagtaggtcc
ctctttagtgaagcaggggagccagccattgggacacctcagccctcagggttagctaac
aagaggccgcgttttaatgtttctacctatgggtctcctgttgtaggtgacagatctgtg
ctcagtaattctacgtttaaatcttcacctttctatccggggaaaactatgtatggtgga
gcttctgcctatagaagaaatagattgcagtccagaacttcccaccagactgctcgtgtt
caagtcaaaaacaagtcggcagagtcttcagatgacggtggactcagccaagctgcccgc
cgcatcctggacagcttagagcagatgtcgacacccatatcagatgccaagcggataccc
acccctactccagggcagaggggtagtttcctggatgcagcaccctcatatacagcctct
ttttataagcacaggccgaatttaagatctgcacctccaacctcaaagcttcttactcca
acaaaactccctgttcaggaaaacttatcaaaaagttttttaaaaccttctgcaagcccc
tctatcagcacttctactgcattcacctcctcctcctcgtcaacccttaagagaactgtg
gaggaacccaggcatatggagatgataatacaggaggaagagaaggagaagaaaaacagc
agcagtagcagcagcattgcaacagttaagacaaaggaggtgtctgaatcaaccacactc
acctctttcccggccccaaccccagctgccagttccaccttctccaaagctgctgcagag
gcagtcagcaagttcaagagtgtacccaccaccactacccccctgccagccctctcttca
ccaggcgtgttcaagtttggactggccagtagcaacagtgcctcaaagcaaacacaggat
cttgtgacaaaggcaatgcctgtcatgagtgattcaccccagactcttaaggatggtggc
ggaaagatgaagtcaaaggttgtcgagagtggaagaatctccagcaaacaggaggaagat
gtggtttctgaagagtccaagctccccacagtccctctgaccctatcttcactccccaaa
atcaatttgcctctcactgtccctgcagcagggaccccagccagtagcagtggcatggct
tcaggcttcaggttttccatcccagaggtggtggatacacaggcagctgcctccgagacc
atgaccaatgccctaaccttcacttttagtagtccggcgttagttaatgaggagagcaaa
gccactaaccagtcttctagttcttcttgtagcaatctttcctcaacaatgatgtttaat
agcagcagcccaagctttgcccctaaacttaaggctactgctaagaaggaggccatgcct
aaggcacctaagctccaggcaggaagtatcctggacattctgaagccgaaaggaggtacc
ccagagaagcttgttgctgggattgcctctccttcactgcaaaataggattgaagagaag
ttcaatgcatttggtagtcctaaagtttccagtgaaagtatcaagccggtggtagaacag
actgttaataatgttgttgagaaaactagtgtttcacaagggtttgagggatttggtgga
gccttcaagaagtcaagtgaggaatgggagtgtagtgtatgtatgatcaggaacaaaaac
tcggcagaaaaatgcgtcgcatgtgagactgcaaaaccggggaaaacttcatcacatggt
atccaaactaatgcatctgtctttagtaatacagatcctaccccaactattacgggtaat
ggaacagactggggctcagccttcaagaagtctagcaatgaatgggattgtgatatgtgc
atgttacgaaacaaagactcggtggacaagtgtgttgcatgtgaaacccccaggccaggg
agcaaagcaaaacaggccccattagcggagtcaaaaccattggatggaaaggaggagaag
gtgaattttgggtttggctcagcctttgccaaggccaagggggagtgggagtgcgataca
tgtttagttcgcaacaaaagtgaagctacgaagtgcatatcgtgtgagactccaaagcct
ggtgctgctaatatttctcaagccataacaggaaactttaagtttggtgtaaatacaaat
gactcttcttccacaagtagtagttttaagtttggtttagacaactcacagactgaagta
aaatctaatagtggttttgcatttggggttagtgccaaaagtgctgaagacactaatagt
aaagaaagttctggatttaaatttggaattgcatcagagaagccaagcttagggatggac
tccaatagtgagagtgacaagtcgaaggagaaaagtgcaagtgccagtagtggtatcagt
tttggcttaaagccagatgaatccaagggcaagcagttccctgttccatcaatgaacttc
accttttcagctcctaataagcctgctagtagtacagaaactgtaaataccaaacctagt
ttcacattcagttctgggagtgaaactgtggcatccttcaattttggagccacagaaaca
aaagctaagcaagccgcaggagaaggtcaagctaaaacttcaacagagataaagccagca
tcagagattaagagtgggagtgtcttggatgtattgaaggtgaaagacacaaaggcgagt
gaggtgttcaacttcggcgccaagcttgagaaggtcgatggaggcgtgccaaaaccctca
tttgccttcaacaatgctgtgtcgacctccacaaaagcaggtgattcaaagtctacatca
gacccagctgtgccaagtggcactttcacttttggtgctaatggaaaagaaagcagtgca
ggatccactactgtcattgctacaactgcacctctcttcacctttggtgataaggggtca
ggcactagtactgcaccttcctttgctttcaatactgcccctgcgaaggaggagtccaag
accacgccagccttctttagcgggaagagagagaactctgactctagtgagccagcaaag
aagagtgtctttggagggtcagccaccagcatcaacaatggggtaggtgcaacaccctct
ctgtttaactttggtagcaaggagaataaactggcttctggtccaggattttcaacacca
tcagctactccagcatttggggccccaactccagcatccaatgctacacccaactttcaa
tttgggaatagcaacccacctgctccagctgctacagcacccccagcctttggaaaccct
gctcctgcttttggtagtccagccccagcatttggcagcaacaacaacaactcgacccca
agcttcacctttggtcagccacctgagaagaagcaaagcacaggatttgactttgggcag
acgccttccaatgccccaacccaagggttcaactttgcagcttcaactgggacacctggt
gtatttcagtttggacagagtcaagctaatagcaccccttctagtggattgttccagttt
ggttcaggaaacactcctgtccaaccagccccctcatttggtggtggaggtgacaatccc
ttcagtgcccctgcacctcctagcggtcgcgtcatgaaaaaggccgtgagacgtacccgc
aagccgtga
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