Penaeus vannamei (Pacific white shrimp): 113823139
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Entry
113823139 CDS
T06111
Name
(RefSeq) thrombospondin-1-like
KO
K04659
thrombospondin 2/3/4/5
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Pathway
pvm04145
Phagosome
pvm04512
ECM-receptor interaction
pvm04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
113823139
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
113823139
09142 Cell motility
04820 Cytoskeleton in muscle cells
113823139
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvm04131
]
113823139
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pvm04147
]
113823139
00536 Glycosaminoglycan binding proteins [BR:
pvm00536
]
113823139
Membrane trafficking [BR:
pvm04131
]
Endocytosis
Phagocytosis
Opsonins
113823139
Exosome [BR:
pvm04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
113823139
Exosomal proteins of colorectal cancer cells
113823139
Exosomal proteins of bladder cancer cells
113823139
Glycosaminoglycan binding proteins [BR:
pvm00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
113823139
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
CBM_14
Motif
Other DBs
NCBI-GeneID:
113823139
NCBI-ProteinID:
XP_069988557
LinkDB
All DBs
Position
17:complement(15916967..15937913)
Genome browser
AA seq
1014 aa
AA seq
DB search
MMESWNIFTLTMAVGIAVVMATTRLECPGEGRFPDLDACGQFYDCTSDSNGSYVMTRDYC
RGFVYNATARTCSGDVRCKSRRSRSPPIASHKHSHLCEFKPDSFQCADCKNLVMCIKGQA
FIRRCTSGAFCDKRERFGGAVCYPGRPQECTCEKPHSLRQDLYDPQRFFSCESAGSKPEG
YRCQDNMIFDEALGLCRNKESTLSCTEAGLFAIPKSCSDYFSCIPLRHGWVQRFYMCTNN
RYFSQKSEACKDPCSGNFVCTIPGYFGDPFDTRRFFVCFDDPLRIIKIHYQCPTGHVWNS
NFTRGAEQCVPDTEGRSQAPCFVPIDSCPDVYMFEETGRSMLSTGACDQEPCFPGVSCNP
AVEAPFYSCDPCPPGAEGDGVLCKDNCPLVSNPLQEDADFDARGDRCDNCPYIPNPEQKD
TDGDFVGDDCDDDIDNDGILNEMDNCPFTPNAHQVDTDGDGVGDVCDNCPEDANPWQENK
DENAAGDACDFDIDSDRDGVQDSADNCPVHANSDQVDVDGDGAGDACDKDSDNDGVEDDR
DNCPLIPNQDQKDSSFADGRDRGDACKRDFDGDGVEDASDNCIRNPTVHKTDFRSLQTVS
LDHDHYIFPPEWVVNDNGTEIHQTKSTDPVLAVGPHNLGNVDYEGTLYVTDHSDDDYVGI
VFSYQTNAKFYAMTWKKETQFWSALAEKGVQLRAIDSATGPGRELRRALWDSGTTDGQVT
VLWQNGTLGWHPHVAYRWQLHHRPDLGVMRLFLYEGRSLVADSGNVYDDTLKGGRLGLYC
FSQRAVVWSNLRYACADDLPKAMLDDLPPEKRSQKATSLRTRTRLRPLPPLSPTPPPENP
ANPTPPPENPTDPTHFPADPANPTPLPADPANPTPFPADPANPTPLPADPANPTNPTPFP
ADPTPLPADPTPLPVDPTPLPADPTPLPADPTPLPVDPANPANPTPPPEYPTCYRLMVLP
TVFHPCLDRQSPLWRAQTMSKASTTRSNSALQIWSVYREPVGKCSITWTWLGVP
NT seq
3045 nt
NT seq
+upstream
nt +downstream
nt
atgatggagagctggaatatcttcacgctaactatggccgttgggatcgccgttgtcatg
gcaactactagactcgagtgcccaggagagggaaggtttcctgacctcgatgcatgtggg
cagttttacgattgcacctcagacagcaacggcagctacgtcatgaccagggattactgt
cggggcttcgtgtacaacgccactgccaggacttgtagtggcgatgttcggtgcaaatcg
cgcagaagccggagcccgcctattgcaagccacaaacactctcatttgtgcgagttcaaa
cccgacagtttccagtgcgccgattgcaagaacttggtcatgtgcatcaaagggcaggct
ttcatccgccggtgcactagcggagcgttctgtgacaagagagagcggttcggaggcgcc
gtgtgctacccagggaggcctcaagagtgcacctgcgagaagccacactccctgcgacaa
gacttgtacgacccccagaggttcttctcctgcgagagtgctgggtcgaagcccgagggt
tacaggtgccaggataacatgatctttgacgaagcccttggcctgtgtcggaacaaggaa
agcacgctctcatgcaccgaagcgggcttgtttgccattccgaaaagctgctcggattac
ttctcctgcatcccgctccgacacggctgggtgcagcggttctacatgtgcaccaacaac
aggtacttcagtcagaaaagcgaagcgtgcaaagacccttgctcggggaacttcgtgtgc
accataccggggtacttcggcgatccgtttgatacccgccggttcttcgtctgcttcgat
gacccgcttcggataataaagatccattaccagtgtcctacaggccatgtctggaattcg
aactttacacggggagcagaacagtgtgtgccggatactgaaggacgctcccaggccccg
tgtttcgtcccaatcgatagttgtccggatgtctacatgtttgaggaaacgggcagaagc
atgctaagtacaggagcatgtgaccaagagccttgtttcccgggcgtctcgtgtaacccg
gcggtcgaggcccccttctactcctgcgacccgtgcccccctggtgccgagggggacggg
gtgctgtgtaaggataattgtcccctagtctccaaccccctgcaagaggacgccgatttt
gacgcgaggggcgaccgctgcgacaactgcccctacatccctaaccctgaacagaaggat
accgacggggacttcgttggggatgactgtgatgacgatatagataatgacgggatcctc
aacgaaatggacaactgccccttcacccccaacgcccaccaggtcgacactgacggcgac
ggtgtaggcgacgtgtgcgacaactgccccgaggacgccaacccctggcaggagaataag
gacgagaacgcagcaggagatgcttgtgacttcgacattgactcggatcgcgacggcgtg
caggacagcgcggacaactgcccagttcacgccaacagtgaccaggttgacgtagacggc
gacggtgccggcgacgcttgtgacaaggacagtgacaacgacggcgtggaggacgaccgt
gacaactgtccgcttattcccaaccaagaccagaaggattcttccttcgccgacggccga
gaccgtggtgacgcctgcaagagggacttcgacggcgacggagttgaggacgccagcgac
aactgtatcaggaatcctactgtgcataagactgatttcaggtcactgcaaacggtgtct
ctggatcacgaccactacatctttcctcccgaatgggtcgtcaacgataacggaacggaa
atacaccagaccaagagcaccgaccccgttctggccgttggtcctcataacctgggaaat
gtcgactatgagggaacgctctacgtcacggatcattcggacgatgactatgttgggatt
gtgtttagctaccaaaccaacgccaagttctacgcgatgacgtggaaaaaggaaacgcag
ttctggagcgccttggccgagaaaggcgttcagctgagggccatcgactccgcaacaggg
ccaggccgggagctgaggagggcgctgtgggactctggcaccacggacggccaggtcaca
gtgctgtggcaaaacggaaccctcggctggcacccgcacgtggcataccgctggcagctc
caccacaggcccgacctgggtgtcatgaggctgttcttgtacgagggcaggagtctggtc
gccgattctgggaatgtttacgacgatacgctgaagggaggccggctgggactctactgc
ttctcccagcgggcggtggtctggtccaacctgagatacgcctgtgctgacgaccttcca
aaagccatgctggacgatttgcctccggagaagaggagtcagaaggcgacctcactcagg
acacgcacgaggttacgacccctaccacccctgtcccccacgcctccccccgagaacccc
gcgaaccccacgcctccccccgagaaccccacggaccccacgcatttccccgcggacccc
gcgaaccccacgcctctccccgcggaccccgcgaaccccacgcctttccccgcggacccc
gcgaaccccacgcctctccccgcggaccccgcgaaccccacgaaccccacacctttcccc
gcggaccccacgcctctccccgcggaccccacgccactccccgtggaccccacgcctctc
cctgcggaccccacgcctctccccgcggaccccacgcctctccccgtggaccccgcgaac
cccgcgaaccccacgcctccccccgagtaccccacttgttatagattaatggttctacca
actgtattccacccttgtcttgatcgtcagtcacccctttggcgagcccagacaatgagt
aaagcctcgaccacgcgatcgaacagtgccttgcagatttggtccgtgtaccgagagccc
gtcggcaagtgttcgattacgtggacgtggcttggagtgccttga
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