Penaeus vannamei (Pacific white shrimp): 113823173
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Entry
113823173 CDS
T06111
Name
(RefSeq) phospholipid-transporting ATPase ABCA3
KO
K05643
ATP-binding cassette, subfamily A (ABC1), member 3
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Pathway
pvm02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
113823173
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvm02000
]
113823173
Transporters [BR:
pvm02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
113823173
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Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
SMC_N
AAA_30
AAA_23
Motif
Other DBs
NCBI-GeneID:
113823173
NCBI-ProteinID:
XP_069980667
LinkDB
All DBs
Position
8:33528119..33552374
Genome browser
AA seq
1858 aa
AA seq
DB search
MQNPKPSGAFGKGERRERSAWRHLLLLLWKSLLLRRRHWLLTLLEVILPVGLFSVMLFIR
LIPGSNFSTYHFNETIARPEEEFYLREQVCWKYGTWFGNACRAYPTSPATVYYGPDTPFT
QDIAKYIAQELGFLEQNIRATASNDEIDKLVEMSYYAKNSSHSPSNYNVGLFFHLDDRES
SDPPQKLAYDLRLPGRWSTMWIYDFLQLPGPGYSNEVYKDQGFTLIQSLLDRRYISIISN
DTSYTDNYKIEIQKYPYPAYDSDLGISFVYSTVLPSSLVMALVLLAPSLIKSVVHEKDTG
VRELVCLMGMNRWLVWLGWFLHSALLNVVVISALTVMLSVSMYNGDLYVPPILAHTDTGY
VWLLLFLYSFSSIAFCLAISTFFNRPTLAMTVGILVWLLSYSIPNNLMYYKYDTLGQAPK
VLSCLLPNMAITWAFKIIQMFEGRGKGVVWSTIWEPGNPRDQLNPAIILIMLAFDTFLYL
LITWYVDQVNPGTYGVPQPWYFPFQKSYWCGSRLTSHSGSPEDFGENQEYFEKEPAGLKP
GIVIKNLRKEFKELGRKTKVAVENVSLTCYEGQCTVLLGHNGAGKTTTMSVLTGVYASTS
GYAEVNGWNIATNLSEAREELGLCPQHNMLFVDLTVLQHLLFFGRLKGLTSKAAKAEALE
ILTRLELLDKQQMFGNQLSGGMKRKLSLAISLMGSTKVVILDEPSSGLDPESRRWVWDVV
QGERGRRTFLITTHHMEEADVLGDRVAIMASGRVVCTGSTLFLKKKFGDGYTLTVMVNNE
TVVEAIKGKVEEHLPSATLANVHSGELTFKLPPDTEKFAAMLDTLSAHKETLGIRHISLS
LTNMERVFLRVGELLDGGSSTNGSSVNRGTNGLTMTQGNGSTNGGDCSSVGSTFDLESGY
TSSTHQLHRDEDNNRRKLQGKPLAFQRLKAFLIKRLIYCKRKWVLQITQSLIPVLVSIIC
LLVDNSIQTLSSSEPPLQLGLDLISPSTSFVHADGNKQPLMDHYVSLFSPPHKILNATNM
TASLLKAANENIQYYRENSICSAEFLDLPSYPEEHTRLNMLYQSVPHHVLGISTSLVDNA
LLRLATNSVDHDITTTNRPLPIDTTWQFRTDFSTSALVYSSVMPLALCFLSASFLVFPLQ
ERETKAKQVQIMTGAPVWALWASSFAWDFLAYMATALLIFIFFVAINPSNFFLAPQAAGV
LFFLLMMYGWGSIPLSYVFSFLFKTAASGFAILTLINIVAGQMLSLVVYILSMTGVSGAE
TAGDVLHWISSIIPTYPVSVAFRHLVQTSVQNSFCDKFDANMTAQLCALLAITDRKNDFV
QCCPAVCGRNNTTPCFEWQSYFRFSENGMGPDLLTLFVDGLIFFCLVGLIEAGFGRVLLR
WWRECTGKAGMFRRARIPQQEMHQDEDVVAEEELVKRMMARAQGDAVSADKAMFVSELSK
HFFGSLIPAVNKVSFTLGRGECLGLLGVNGAGKTTTFRMLTGDEEPSGGNAFIDRISLMH
QRNKFVQNVGYCPQFDAIMGELTGKEMLWLMGRLRGVHDITLRREVEELVALVDLTECAS
RPSSTYSGGNRRKLSTAMALVGAPPLIFLDEPTTGVDPASRRRVWTVVSRAVNNGQSVVL
TSHSMEECEALCSRIIMMSKGALRCVGTTGHLKAKFGQGYSLQVKLKTHDLSQAGDDENE
RIYQSKLSELKNIVSSYFPGATVSDEHKGTIAYLVPKNISWALLFSVMEDLKAGRKPGSE
HQSQPQPTDSASMPPFVEDYAASDTSLEQVFLSFAREANPGEVGAAVNPQTSTGNLSEQS
SNRLSEGVAGGSEIQPTPGNVSSPGIQTFQEFFSPHNPNEQQISMVTVNNSRDLLTEL
NT seq
5577 nt
NT seq
+upstream
nt +downstream
nt
atgcagaatcccaagccttctggtgcctttgggaaaggagaacgtcgcgagagaagtgcc
tggcgccacctgctgctgcttctgtggaagagcttgttgctgcggcggaggcactggctc
ctcacgcttctcgaggtcatcctgcccgtcggcctcttctcggtcatgctcttcatcaga
ctcatcccgggatccaacttctccacgtaccattttaacgagaccatcgcaaggccagaa
gaagagttctatttgcgggaacaagtgtgctggaaatacgggacgtggtttggcaatgcg
tgccgcgcctatcccaccagcccagcaacagtatactacggtcccgataccccttttaca
caggatatagctaaatacatcgcccaggagcttggctttcttgagcaaaacatacgagca
accgcctccaacgacgagatagacaagctggtggagatgtcctactatgcgaaaaactcc
tctcactcccccagcaactacaatgtgggtcttttcttccatctggatgatcgagagagt
tctgaccctccccagaagttggcctacgacctccgccttcccggccggtggagcacaatg
tggatttatgacttcttgcaactgcccggacctggttattccaacgaagtttacaaagac
caaggattcacgctgatccagtctctgctggaccgaagatacatatccataatcagcaat
gacacttcgtatacggataattacaagatcgaaatccaaaagtacccgtatccggcttac
gactctgacctcggcatcagtttcgtctactcgaccgttctcccgtcctccttggtgatg
gcgctggtcctgctcgctccgtcgctcatcaaaagtgtcgttcatgaaaaggacacaggt
gtcagggaactggtctgtctcatggggatgaaccgctggctcgtgtggctggggtggttc
ctccactccgccctcttgaacgtggtggtcataagcgcacttaccgtaatgttgtcggtg
agcatgtacaacggtgacctctacgtgcctccaatcctcgcccataccgacactgggtat
gtgtggctgctgctcttcctctacagcttctcctccattgccttctgtttggcgatctcg
accttcttcaacagacccacgcttgctatgaccgtggggatcctggtatggttgctgtcc
tatagtatccccaataaccttatgtattacaagtacgacactctcggccaggctccgaag
gtactatcatgcctcttgcccaatatggctatcacatgggctttcaagatcatccaaatg
ttcgaaggaagaggtaaaggtgttgtttggagcactatatgggaacctggtaatcctcgc
gaccagctgaatcctgccatcatactgatcatgttagctttcgataccttcctctatctg
ttaatcacctggtatgtcgatcaggtcaatccagggacttacggcgtcccccagccttgg
tatttcccattccagaagagttactggtgcggatcaaggctaacgagtcacagtggatca
cctgaagactttggcgaaaaccaggaatactttgagaaggaacctgctggcctcaaaccc
gggattgtcattaagaacctgaggaaagaatttaaagagcttgggaggaagacaaaggtg
gcagttgaaaatgtgtctctaacatgctatgaaggtcagtgcacggtgctgcttggtcac
aacggcgctgggaagacgactactatgtccgtgctcacaggggtgtatgcttccactagt
ggctacgccgaggtcaatggctggaatattgctactaacctgagtgaagctcgagaggaa
ctaggtctttgtcctcaacacaacatgctctttgtcgacctgactgtcttacaacatcta
ctcttctttggacggcttaaaggcctgaccagcaaagcagccaaagcagaagcacttgaa
atcctgacgcgactggaactactggacaagcaacaaatgttcggcaatcagctctctgga
ggcatgaagaggaagctcagtctagctatatccctcatgggtagtacgaaggtcgtcatc
ctggacgagccgagcagtgggctggatcctgagtctcgacgctgggtctgggacgtggtg
cagggagagcgcgggcgtcggaccttcctcatcacgacgcaccacatggaagaggcggac
gtgctcggggaccgcgtggcgatcatggcttcggggcgggtcgtgtgcacaggctctacg
cttttcctcaaaaagaaattcggtgatggctatactctgactgtgatggtgaataatgaa
actgtggtagaagctatcaagggaaaagtggaggaacacttgccttccgctaccctggcc
aacgtccacagtggagaactgacctttaaactcccgccggacaccgaaaagtttgctgcc
atgctggacaccctctcggcccacaaggaaacgctgggcattagacacattagcctttcc
ctcactaacatggagagggttttcctcagagttggcgaactgttggacggtggtagtagc
actaatggaagctccgtgaatcgtggcactaacggcttaaccatgacacaggggaatgga
agcacgaatggaggagactgcagctctgtgggatctacctttgatcttgagtctggctac
accagtagcactcaccagcttcaccgggacgaagacaataatagaaggaagctccaagga
aaaccgttggcatttcagaggcttaaagctttcctaatcaaacggctcatctactgtaag
aggaagtgggtccttcagataacacagagtctgattcctgtgctggtgagcatcatttgc
ctccttgtggacaacagcattcaaaccctgtcgagcagtgagcccccactccagctgggc
cttgacctcatctccccgtcgacctctttcgttcacgccgatggaaataagcagcctcta
atggaccattatgtgtccctattttctcctccacataagatattaaacgctaccaacatg
acagcaagtcttcttaaggctgccaacgagaatatccaatactaccgggaaaacagcata
tgctccgccgaattcctggacctcccgagctaccccgaagagcacactcggctgaatatg
ctgtaccagtctgtcccgcaccatgtcctgggtatcagtacctctctggtggacaacgcc
ctgttacgacttgcgaccaactcagtggaccacgatatcaccacgacaaatcgcccgctg
ccgatagacacaacttggcagttccggacagatttttccactagcgccttggtgtactcc
agcgtgatgcctcttgctctctgttttctctctgcctcattcctggtcttcccactgcag
gagagggaaactaaggctaagcaggtccagatcatgactggcgcccctgtgtgggcgctc
tgggcctcatcctttgcgtgggacttcttggcgtacatggcaacagcgctcctgatcttc
atcttctttgtggccatcaatccgagcaacttctttttggctccccaggccgctggagta
ctcttctttttgctgatgatgtacgggtggggcagcatccccctgtcctatgtctttagt
ttcctcttcaagacagcagcttcaggttttgctattctcacccttatcaacattgtggca
ggtcagatgttgagcttggtggtgtacatactgagcatgactggagtgtctggagctgaa
accgccggggatgttcttcattggatcagttccatcattcctacctatcccgtatctgtg
gctttccgacacttggtgcaaacgagcgtgcagaattccttctgtgacaaatttgacgcg
aacatgactgctcagctgtgtgcgctcctcgccattactgatcggaagaacgattttgtt
caatgttgtccggccgtgtgcggcaggaacaacaccaccccttgcttcgagtggcagtcc
tacttccgcttcagcgagaacggcatggggcccgatctcctcacactcttcgtcgacggc
ctcatcttcttctgcctcgtcggcctcatcgaggctggctttggacgcgtcttgctgcgg
tggtggcgcgagtgtacggggaaggctgggatgttccggcgagccaggataccccagcaa
gagatgcatcaggacgaggacgtcgtggcagaggaagagctggtgaaaaggatgatggcc
cgcgcacagggagatgcagtctcggcggataaagcgatgtttgtttctgaactatcaaag
cacttcttcggctcgctgattcccgccgtcaacaaggtgagcttcactcttgggcgtgga
gaatgcctggggctgctgggtgtcaatggggccggcaagaccaccaccttcaggatgctg
acgggcgatgaagaaccctcaggtgggaatgccttcatcgaccggatctcgctgatgcac
cagaggaacaagtttgtgcagaatgtaggctactgtcctcagttcgatgccattatgggt
gaactaacaggcaaagagatgctatggttaatgggaagactccgtggtgttcatgatatt
acactacggagggaagtggaagagctagtagcactggtggacctgacagagtgtgcgtct
cggccgtcctcgacgtactctggcggaaatcggagaaagttgtctactgccatggcgttg
gttggggcgccgcccctgattttccttgacgaacccacaactggtgtggacccagcgtct
cgccgtcgggtgtggacggtcgtgagtcgcgcggttaacaacgggcagagcgtggtcctc
accagtcactcgatggaggaatgtgaagctctgtgctcccgcataatcatgatgtccaaa
ggagctttgcgctgcgtgggcaccacggggcatctgaaagcgaagtttggccagggttat
agcctccaggtcaagctgaagacccatgaccttagtcaggccggcgacgatgagaatgag
cggatttatcagtccaaattatcggaactaaaaaatattgtaagctcatacttcccaggt
gcaacggtgtcagacgaacacaagggaacgattgcatacttagttccgaagaacatatcg
tgggcgttgttattctcggtcatggaagacctgaaggcaggacgaaagcccgggtcagaa
catcagagtcagccacaaccgacagatagcgcgagtatgccaccattcgttgaagactac
gctgcctccgacacctccctggaacaggtgtttctttcctttgctagggaagctaatcct
ggtgaggtaggagcagcggtaaatccccaaaccagcacagggaatctctctgaacaatca
agcaatagactaagtgaaggtgtggcaggagggagtgaaatacagccgacgccaggtaat
gtcagcagcccgggaatacagacttttcaggaatttttctctccccataacccaaacgag
cagcagatttcaatggttacagttaataattccagggatttactgactgaactctag
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integrated database retrieval system
