Penaeus vannamei (Pacific white shrimp): 113823284
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Entry
113823284 CDS
T06111
Name
(RefSeq) RING finger protein 17
KO
K18405
tudor domain-containing protein 1/4/6/7
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pvm03036
]
113823284
Chromosome and associated proteins [BR:
pvm03036
]
Eukaryotic type
Gene silencing
piRNA pathway
113823284
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TUDOR
Agenet
SMN_Tudor
SGF29_Tudor
PUA_4
DUF4832
Gemin6
Motif
Other DBs
NCBI-GeneID:
113823284
NCBI-ProteinID:
XP_069982951
LinkDB
All DBs
Position
11:2347711..2393569
Genome browser
AA seq
1522 aa
AA seq
DB search
MRQKGKTVDGCGVTDDDNKRGIKTVERIGGEQLNGSSWFHIELSSGWFDVSVLGREVRKG
GCRQVLGVRLLAVARVPRCEAIAGGAWQEHGIAAAEMQAWTQDPGIKNKKLFKSTTMTCT
ITHILGYTEVDHMLVMSVRVRSSLYSIHIVSYMSSCKASNTGQERWEVVNELEEIVQEII
PNCIRVIDTHDRFSLISKQDEQGQGEGEGDGDGETSKEIECSVNDLQPVNAHPEKDDDVE
KEDSISKSDPTKAVAAMNGTLESTPNSQETGNNPAVRDFNYNFTDIPDSGDNVCKVSKDW
RGHGARPKAWSLRSLRKSVSISSLHSQPSSVATSIQPSKNATFVINDEVIVTHIQNPSVF
YIQRLADSAKLQLMSKVINLIARESKVLTTDPVVGKLYLAQYTRDNVWYRAVVTSVAIDM
KEVCVKYVDYGNSEILKVQRLRPCPPEYKLERFPAFLYACGLWEILPAKGNLWDSDAINV
FAELVNNVHLKLLHVEDKESETGIYQVDLWRPSTIAGIANDSPLSIREVLIFLECAIYVN
YSAQDMHNKQAASIWKRSYFRQEVPFGEDGTSVLLSSLTTPHDFCLQLASYATHLTKLME
EIQKHYRSPKVAATVDWRIYAPRIGMPCVALYTGDDKWYRAIIEDIPGKKQVDVRYVDYG
NRERLWYKQLHKITEDFLKLPAQAIKCRLQDINPIGDGWSENAAEHMATICDGKDLKAFF
HTSENDECIVSLMVCTQEPEDIGEQLMELGVAEAPENFKIHYQKNQALRLMLGGEMMQNK
RQGRCKRALQQLKQMQAPVLKPGAVCAGKRCVLVEFLTALSVCRIQIRLASQAGIFRDLQ
NQLDEELNQVSQPMQFTPAAGEVCAIKMTHAPFCARARIIKFDCDSIQVLLVDCGGMEWV
KYSQVFPLPERLASFQNLALMVSLAGIAPPMGKSGWPGITFDRLKEELSTRSNLYMKRKG
RSVLDPELGVKVMPVELGWMQEEVGGPFEPNTVLTFSINELLIECGVALPAKSVQPDNSM
VAEKSCLADSACTLTYEKALSCEDFCLQEAESLSILSMLVDQEKMPCDTKENPFAKLKEW
PSSPLPASATFNAIPSYIDYEGVIYLQPVANTRNIELMRESQTIQFTGTVATDEDLCWSP
GDPVIAMFHLDKKWYRATVLQREEDGNVKVQFIDYGNEETVPFNQLRQTITFSHIPVQCH
RAVLHGIVPNSLKGKWETKLLDFIHSTIVEKECRVQVMEKTKEDGLLKVNLEILDVAIDL
SSLLADKMRVCKRVSKVEPLLEYEDSVDVVVESDVSLDSVLDLSLPVPALKLPSDPSEIF
PIKVTAIKDPSHVYIAPVFLGQGPLSATQKLAEENFIANTNFIKQAACDIKAYSVVSNPV
IGEMYLGKSLRGEWCRVQVKKIDPAGITVLYIDIGNVERIPQNWLVICPSEGKKIPANAI
CVKLHCVEPRDGPHAPWDEDALKCLSSCFMQSADKKFCAVVKEDGNLPVVEIYKVDEHGT
RTLAYADAISEGHIVLGEEMKE
NT seq
4569 nt
NT seq
+upstream
nt +downstream
nt
atgcgccagaagggcaagacggtggacggatgtggagtaactgatgatgataataagcgt
ggaataaagacggtggaaaggattggaggtgagcagttaaacgggtcttcctggttccac
atagaactgtcttccgggtggttcgacgtcagcgttctcgggcgcgaggtgcgcaagggt
ggctgcaggcaggtcctcggtgtccggctcttggctgttgctcgagtgccccggtgcgag
gccatcgccggcggcgcctggcaggagcatggcatcgccgccgcagagatgcaggcgtgg
acgcaggatcccggaattaagaacaaaaagttattcaaatctaccaccatgacctgcacc
attacccacatccttggttacacagaagttgatcatatgcttgtcatgagtgttagagtt
aggtccagtttgtatagtattcacattgtcagttatatgtctagttgtaaagcttctaat
actggtcaggaaaggtgggaagtggtcaatgagctggaggagattgtacaggagatcatt
ccaaactgcataagggttatcgacacccatgacaggttttcccttatctccaagcaggat
gagcaaggacagggagaaggagaaggagatggtgatggagagacatccaaagaaatagag
tgttcagttaatgatctccagccagtgaatgcccatcctgaaaaagatgatgatgttgag
aaagaggactctatcagcaaatctgaccccacaaaagcagttgcagcaatgaatggtact
ttggaatcaactccaaatagccaggagactggcaataatcctgcagtccgtgatttcaat
tacaactttacagatattcctgacagtggtgataatgtttgtaaagtttcaaaagactgg
agaggtcatggagcaaggccaaaggcgtggtcattgaggagtttgcggaaaagtgtctcc
atatcaagtttacactcccaaccatcaagtgttgcaacttctattcagccatcaaaaaat
gctacatttgtaataaatgatgaagtgattgtcactcatattcagaatccatctgtgttc
tacattcagagactagcagattcagcaaaactacaattgatgtcaaaagtgattaatctt
attgccagagagagtaaagttttaacaacagatcctgttgttggaaaactgtatttggca
cagtacactagagacaatgtatggtatcgagctgttgtaacttctgtagcaatagatatg
aaagaagtatgtgtcaagtatgtggattatggaaatagtgaaattctcaaagtgcaaagg
cttaggccatgtccaccagagtacaaattggaaagattcccagcatttttgtatgcttgt
ggactgtgggagattttacctgctaaaggaaacctttgggattcagatgccattaatgta
tttgctgaacttgtgaacaatgttcatctgaagttgctccatgttgaagataaagaaagt
gaaacaggaatttaccaggtagatctttggagaccatcaactatagccggcatagctaat
gatagtccactctccatccgagaagtcctcatcttcttagagtgtgccatttatgtcaat
tattctgcgcaagatatgcacaataagcaagcagcatctatctggaagaggtcatacttt
cgacaagaggttccttttggggaagacggcaccagcgtgttactctccagtctcacaact
ccgcatgacttctgtctacaacttgcttcatatgcaactcatctcaccaagttgatggag
gaaatacaaaagcactataggtcacccaaagtggctgctactgttgattggcgcatttat
gcacctcgaataggcatgccgtgtgttgccttgtatacaggggatgacaagtggtacagg
gctatcattgaagacattccaggaaagaaacaagtggatgtaagatatgttgactatggc
aatagggaaagattgtggtacaagcaacttcataagataacagaagatttcttgaagttg
ccggctcaggctattaagtgccgtctacaggacatcaatcctattggtgacggttggtct
gaaaatgctgctgaacacatggccactatttgtgatggcaaggatttgaaggcattcttc
catacttctgaaaatgatgagtgtattgttagtcttatggtctgcacacaagagcctgaa
gatattggagaacagttaatggagcttggagttgcagaagcaccagaaaacttcaagatc
cactatcagaagaatcaggcgttgcgtctcatgcttgggggtgaaatgatgcagaacaag
aggcaaggcaggtgtaaaagagctctgcaacagctcaaacaaatgcaggcaccagtttta
aaaccaggtgcagtctgtgcaggaaaacgatgtgttctggtggaattcttgacggctctg
tcagtttgtcgcatccagatacgtcttgcttcccaggcaggaatttttagagatttgcaa
aatcagttggatgaagaacttaatcaagtctcacagccaatgcagttcacgccagctgct
ggggaagtgtgtgccataaaaatgacacatgcacctttctgtgctcgagccaggattata
aagtttgattgtgacagtattcaggtattgctggtggattgtggtgggatggaatgggta
aagtactctcaggtgttcccgttacccgagagattagcaagttttcaaaatcttgcgctg
atggtgagcttggcaggaattgctccgcctatgggaaagagtggatggccaggcatcact
tttgaccgtctaaaagaggaattgtcaacacgcagtaacctttacatgaaacgcaagggt
cggtcagtgctggaccctgaactaggagtcaaagtgatgccggtggagctaggctggatg
caggaggaagttggaggcccctttgaacccaacactgtccttaccttctctatcaatgag
ctgttgatagagtgtggtgtagcattaccagccaaatcagttcaaccagataactccatg
gtagctgaaaaaagctgtcttgctgattcagcatgtaccctcacctatgaaaaagcactg
agttgtgaagacttttgtttgcaggaagctgagagtttgagtatcctttcaatgttagtt
gaccaagaaaaaatgccttgtgataccaaagaaaacccatttgcaaagttaaaagaatgg
ccctcaagccctctacctgcttccgccacttttaacgccatcccttcatatattgattat
gagggtgtcatctacctgcagccggttgcaaatacacggaacattgagttaatgcgggag
agccaaacaatacagtttaccgggacagttgcaacagacgaggacctatgttggagtcct
ggagacccagttattgccatgttccatctggataaaaagtggtacagagctacagtcctt
cagcgggaggaagatggaaatgtgaaggtgcagtttattgactacggcaatgaagaaaca
gtgccattcaatcagttacggcaaaccattacctttagccatattccagttcagtgccat
agagctgtgctgcatggaattgttcctaactcgctgaaaggtaaatgggaaacaaaactt
ctagacttcattcatagcactatagtcgaaaaagagtgtagagtacaagttatggaaaag
acaaaagaggatggattactcaaggtgaacttagaaatattggatgttgcaatagatctg
tcatccttgttagcagacaaaatgagagtgtgcaagcgagtgtcaaaggtcgagcctcta
ctagaatatgaagatagtgttgatgtggttgttgagagtgatgtatcactagattcagta
ctggatttatctctgccagtgccagctctcaaactgccaagtgatccaagtgaaattttt
ccaatcaaagtcactgctatcaaggatccctcgcatgtatatattgcaccagtatttctc
ggccaaggaccattgtctgcaacacagaaattagccgaagagaattttatagcaaacaca
aattttattaagcaagctgcatgtgatataaaagcttactcagtcgtatcaaaccctgtg
ataggtgagatgtaccttggaaaatcccttagaggtgaatggtgcagagtgcaggttaaa
aagattgatccagctggaattactgtcctttacatagacattggtaatgttgagaggata
ccacaaaactggttggttatatgtccaagtgaagggaagaagatcccagcaaatgccatc
tgtgtaaagttgcattgtgtagaaccacgagatggacctcatgctccttgggatgaagat
gctttgaagtgtttaagcagttgcttcatgcagtcagcagataaaaaattctgtgctgta
gttaaggaagacggaaatcttcctgtggtcgaaatctacaaagtggatgaacatggaact
cgcaccctggcctatgcagatgctatatcagaaggacatatagttctaggggaagagatg
aaagaataa
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