Penaeus vannamei (Pacific white shrimp): 113823343
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Entry
113823343 CDS
T06111
Name
(RefSeq) sorting and assembly machinery component 50 homolog isoform X1
KO
K07277
outer membrane protein insertion porin family
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Pathway
pvm04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
113823343
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
pvm03029
]
113823343
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvm02000
]
113823343
Mitochondrial biogenesis [BR:
pvm03029
]
Mitochondrial protein import machinery
Outer membrane
TOB/SAM complex
113823343
Transporters [BR:
pvm02000
]
Other transporters
Pores ion channels [TC:
1
]
113823343
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Omp85
HBS1_N
MCM3_WHD
POTRA
DUF3135
HrpJ
Enkurin
Motif
Other DBs
NCBI-GeneID:
113823343
NCBI-ProteinID:
XP_027231761
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All DBs
Position
7:14450874..14462154
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AA seq
489 aa
AA seq
DB search
MGTVHAKSPEQEEHDGHKVDFQAMRHISKEEREELRKRLKSIRERLAEQKAQVMNKKLRN
TQAHVQRVHVDGLARTKDDIVINTVRDVFTAQDFYSVILKIHEARSRLAKLGCFKDVGVF
IDTYEGPDARDDGIEVTFEVREVNFLGAKVNTSVGNNEGTVTTGGMLKNIFGRAEELSLE
YSHGTKRSSSFYSTFVKPFHNEASTVLTASLYQQGSEAPWSGYRELDRGALLNLAFNSAP
NVQQKLILEGCWRHLSCLSRSTAFAVREQAGHSLKSSLRHELNVDKRDDLVFPTDGVTFT
LKNELAGLGGDIGFLKNELDMQVNVPVTKELVIQGSLQAGHLLPLRNNKTHCITDRFMLG
GPMNLRGFEMAGVGPHSDGCSLGAEMFWAAALHAYIPLPLLSRGGSISEKFRLHGFVNTG
NIGDFVMTDDYKENLQTLIRDMRLSYGAGLAMSLGGFARVELNYCIPLLLQRGDRPNQGL
QFGVAATFL
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgggaaccgtgcacgcaaaaagtccagaacaagaagaacacgatgggcataaagtagac
ttccaggcaatgaggcatattagcaaggaagagagagaggaactaagaaaaagactaaag
agtattagagaaaggctggctgagcaaaaagctcaggttatgaacaagaagttgaggaat
actcaggcccatgtgcaaagagtccatgttgatgggctggcacgcacaaaagatgatatc
gtcattaataccgtcagagatgtcttcactgcccaggacttctactcagtaattttaaag
attcatgaagcaagatcaagattagcaaaattaggatgtttcaaggatgttggtgttttt
attgatacctatgaagggccagatgccagggatgatggaattgaggtaacttttgaggtg
cgggaggtgaactttctgggtgcaaaggtcaacaccagtgtgggaaacaatgaggggaca
gtgactacaggagggatgctgaagaacatctttggccgggcagaggagcttagtcttgaa
tattcccacggcacgaaaaggagttcatccttctattcaacgtttgtaaaacctttccat
aatgaagcaagtactgtactaactgcaagtctttatcaacaaggttcagaagctccatgg
tctggctatagagaactagaccgtggagcattacttaatcttgctttcaactctgcacct
aatgtacaacagaaactcattcttgaagggtgctggcgtcacctctcctgtttgtctcgg
tccactgcctttgctgtgagggaacaagccggccactcccttaagtcctccctccgtcat
gagctgaatgttgacaagagagatgatttggttttccctactgatggagtcacctttacc
ttaaagaatgaattggcaggtctaggaggagatattggattcttaaagaatgaattagat
atgcaagtgaatgttccagtgacaaaagaacttgtcatccaagggtcactacaggcaggc
catcttctaccactgaggaacaacaaaacccactgcattacggaccgcttcatgctcggt
ggccccatgaatcttagaggctttgagatggcaggagttggaccacacagtgacgggtgt
tctcttggggctgagatgttttgggctgcagcactacatgcctacatccctctacctcta
ctttcacgtggtggttccatcagtgagaagttcagactacatggttttgtaaatacagga
aacattggggacttcgtcatgaccgacgactacaaagaaaatctccagactctcatacgg
gatatgcgactgtcttatggggcaggtctcgccatgagtcttggaggctttgcacgggtc
gagttgaactactgcatcccacttctgctgcagcgtggtgacagaccaaaccagggcctt
cagttcggtgttgcggcaacctttttgtag
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