Penaeus vannamei (Pacific white shrimp): 113823502
Help
Entry
113823502 CDS
T06111
Name
(RefSeq) transcription factor IIIB 90 kDa subunit
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pvm03021
]
113823502
Transcription machinery [BR:
pvm03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
113823502
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
BRF1
Zn_Ribbon_TF
RB_B
Zn_ribbon_tTFIIB
BRF2-like_C_cyclin_rpt
Motif
Other DBs
NCBI-GeneID:
113823502
NCBI-ProteinID:
XP_027231957
LinkDB
All DBs
Position
40:complement(21765436..21774920)
Genome browser
AA seq
659 aa
AA seq
DB search
MSSRCQHCGCGDIDIDPARGDAVCTSCGTVLSEHNIVSEVQFLENSHGGSSAVGQFVSSD
AGGKRPMFRGYNGTFARESKEITLNNARKRINALAQQLRLSQHSIETSFNFFKLGLSKGL
MRGRKNNHVIGACVYITCRTEQTPHMLIDVSDALQIDVYELGRTYLRLSTALCINIPAMD
PCLYIWRFAHKLSFGDKTHEVSETALRLVKRMKRDWMHTGRRPSGVCGAALVISARLHGY
NRTINDVIKVVKVHESTLRKRLTEFGETPSSALTPEEFMTMDLDEEQDPPAFRAARKREK
ERVQKLLDEQEDLDSELTVLQQEIEKHLEERKRKLRGIWAKYDREEETTEEESVEQESAD
TQKFITEATLQTIDECLGENGDEAIKPELKVQGIGPSAASLGLKETIEECMEIRPNDPEP
EDRGVLDLSGIDEDEIDSYIMSDREIKLKTELWMKINKDYLEELKLKEEREKKEAEEREK
EGKPPKKKKNYTKKSKSNAPANTAGEAIEKMLMEKKLSNKINYDVLRSLKGEDTGGGEED
IKEEKPSPKTLKTIPVETPEGISSVLHSLTGKRPRNSIKEEGEKSPKKIKGETTDAANTS
LGPKVEDAEEEEEEEEEDCEEEEAEDEEEDEGSLSTAQLLRRRRGEDNSYDDYYDDYYD
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcacgttgccaacactgtgggtgtggggacatcgacatcgacccagctcgggga
gatgctgtgtgtacctcatgtggtacagttctatcggaacataacattgtcagtgaagtt
cagtttctggagaattctcatggtggaagttcagctgtgggccagtttgtgtcctcagat
gcaggcggtaagcggcctatgtttaggggctataatggaacctttgccagagaaagtaag
gaaattacactcaataatgcgcgaaaaaggattaatgccctggcccagcagctacgcctc
agccaacacagtattgaaacatcatttaattttttcaagttagggctgagtaaagggctt
atgcgtggaaggaaaaataaccacgtgattggtgcttgtgtgtacatcacttgccggaca
gaacagactccgcacatgttaattgacgtgagtgatgccctccaaatcgatgtgtacgag
ttgggacggacatacctgcggctgtcaacagctctgtgcataaacattccagccatggat
ccttgcttgtatatttggagatttgctcacaagttgtcctttggtgacaagacacatgag
gtctcagaaacggccttacgtttggttaaaaggatgaagagggactggatgcataccggc
aggagaccatctggggtgtgtggtgcggccctagtcatctctgccaggttgcatggctac
aaccgcactatcaatgacgtcattaaagtggtcaaggtgcatgaatcaaccttgcgcaag
cgtttaacagagtttggagagacaccctccagtgccctgaccccagaggaattcatgacc
atggacctggatgaggagcaggacccacccgccttcagggctgccaggaagcgggagaag
gagcgtgtgcagaagctccttgatgagcaggaggacctggacagtgagttgactgtgtta
cagcaggagattgagaaacaccttgaggaacggaaacggaagctaagaggaatatgggca
aaatatgacagggaggaggaaacgactgaggaggagagtgtagaacaggagagcgctgat
acacagaaatttatcactgaagcaaccttacagaccatagatgaatgcttaggcgagaat
ggtgatgaagctataaaaccggaattaaaagtgcaggggataggtccctctgcagctagt
ttgggtctgaaggaaacaatagaggaatgcatggagattcgcccaaatgacccagagcca
gaggaccgtggagtgctggacctctcaggcattgatgaagatgaaattgactcgtacatc
atgtctgatcgagagatcaagctgaagacagaactgtggatgaagatcaacaaggactac
ttggaagaattgaagctcaaggaggagagggagaagaaggaggcagaggagagagagaag
gaaggcaaacctccaaagaagaagaagaactacaccaaaaagtccaagagcaatgctcca
gcaaacactgcaggggaggccattgaaaagatgctcatggagaagaagctgtccaacaag
atcaactatgatgtcctgcggagcctgaagggtgaggacacaggagggggggaagaggat
atcaaggaggagaagcccagccccaaaaccctcaagaccataccagtcgagacacctgaa
ggcatttcgtctgtgctccactcattgactgggaagagacccaggaacagcatcaaggag
gagggagagaagtcacccaagaagataaagggagagacaactgatgcagccaacacctct
ctaggccccaaggtggaagatgctgaagaagaggaagaagaggaggaagaggattgcgaa
gaagaggaagctgaggatgaggaagaagatgagggcagcctgtccacagcccagctcctc
aggagacgaaggggagaggacaactcctatgatgattactatgatgactattatgattaa
DBGET
integrated database retrieval system
