Penaeus vannamei (Pacific white shrimp): 113823506
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Entry
113823506 CDS
T06111
Symbol
SmE
Name
(RefSeq) probable small nuclear ribonucleoprotein E
KO
K11097
small nuclear ribonucleoprotein E
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Pathway
pvm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113823506 (SmE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvm03019
]
113823506 (SmE)
03041 Spliceosome [BR:
pvm03041
]
113823506 (SmE)
03032 DNA replication proteins [BR:
pvm03032
]
113823506 (SmE)
Messenger RNA biogenesis [BR:
pvm03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
113823506 (SmE)
Spliceosome [BR:
pvm03041
]
Complex A
U1 snRNP components
Sm proteins
113823506 (SmE)
U2 snRNP components
113823506 (SmE)
Complex B
U1 snRNP components
113823506 (SmE)
U4/U6.U5 tri-snRNP components
113823506 (SmE)
Complex C
U2 snRNP components
113823506 (SmE)
DNA replication proteins [BR:
pvm03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
113823506 (SmE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Hfq
Motif
Other DBs
NCBI-GeneID:
113823506
NCBI-ProteinID:
XP_027231962
LinkDB
All DBs
Position
40:complement(21800314..21805009)
Genome browser
AA seq
96 aa
AA seq
DB search
MSYAPKSKVQKVMVLPINLIFRFLQSRARVQVWLYENQNLRIEGHIIGFDEYMNVMLDQS
EEVHMKKGTRKAIGRILLKGDNITLIQNTQPDGTSM
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atgtcttacgccccgaagtccaaggtgcagaaggtgatggtcctgcccatcaaccttatc
ttcagattcctccagtcacgtgccagagtacaggtctggctctacgagaaccagaacctc
cgcattgaaggccatatcattggcttcgacgagtacatgaacgtgatgttggaccagtcc
gaggaagtgcacatgaagaagggcactaggaaagccatcggtcgcatcttgttgaaagga
gacaacataacattgattcaaaacacgcagccagatggaacgagcatgtag
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