Penaeus vannamei (Pacific white shrimp): 113823752
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Entry
113823752 CDS
T06111
Name
(RefSeq) NFX1-type zinc finger-containing protein 1
KO
K27391
NFX1-type zinc finger-containing protein 1
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
AAA_12
AAA_11
ZnF_RZ-type
AAA_19
AAA_30
ResIII
UvrD-helicase
DEAD
SLFN-g3_helicase
PhoH
nSTAND3
AAA_22
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
113823752
NCBI-ProteinID:
XP_070000151
LinkDB
All DBs
Position
31:28843030..28860556
Genome browser
AA seq
2149 aa
AA seq
DB search
MEDYDAGWDELNEQFTPSASFENRRLRSPTHRRPPRPPSQRGKSTGLNRQPGTGPRPFSQ
RGKRPELNRQPGTGPRPFSQHDKRPELNRQPGTGPRPFSQHDKRPELNRQPGTGPRPFSQ
HDKRPELNRQPGTGPRPFSQHDKRPELNRQPVPRPRPLSQRDTSTLLNNGPATVFRNQGR
ESSGAGSRTRSKEYAVGEHVERQHSEETAETDTAPYNNKKRGNRRKRENPMGYKVLESML
ALYPDQVVLKLLTEHSGYDLLIGNEDSISDDKMVLLMQVLCHASKAQVGRENLNSLLVKT
FNTKFINHLIKFSMVIGFQCTGDHEKTLKYFEDLSAVLHTYAHTMPTRAVDHLLPLIDSS
VMICQRLSFPEIVRQNEETKAFLESEKMKVGKQPNQERKTNRGRWLDDLPPPDNFRDLPV
IPTAQDINDVGTPYLRANITGGGYKNVDHYLDVQFRLLREDFVRPLRTGIQEFRVDAHSK
NSDIRIYRNVKVVGTDIKNGDVVHYVEIPFKKNLKIENTKRLLYGNLLCFSTDNFKTLIL
GSVAERNMEDLKKGKLGVKFESDIDNQGKLWVMAESRTYFMAYKHVLTALQGITTDSFPL
QEFIINVTQEKIYPSYLTRQTTYDLRVFKYSTMMKKSETISQLFDSKDNERRDDNWPGVP
RLQTVPLMADLEFWPSEIDLGLDASQRRALRSALTNKLAIIQGPPGTGKTFIGLKITQTL
LHNSEFWKKRHSPILVVCFTNHALDQFLEGIAKFTKSIVRVGSRTKSEVISDFQIRTLIN
VVKKRRQMPEDVYELNQTRYQDALVAEKEVKQWKSVLEETENPQGILQKRVFLAEKVITD
NIASQIQNISLRSWLMDPSVFGKERTIGDTVLDDPKAPADENDDELWGDAEELMADEESE
RMVEMEDDLNTLKHATPRSVLDYEMNIKNLEKELLDLKSEDVEEMDESLQFRHNLNVGML
KVLRHGLQIVRRDSSADLERAETRLHIKNLSFKDRWLLYKLWLKRLNKIVKEKFEIAEKE
FQRCSKALEEIRIQEMLHIMRHAAVVGMTTTGAAQNTAVLQALQPSIVIIEEAAEILEAH
VITSLSRKCKHLIMIGDHQQLQPSATVYELATKYKLEISLFERMIKNGLPYETLDYQHRM
RPEISSLLVPSIYPHLKNHPSVAEYPRIKGVTTSLFFINHNHHEDKGIADDNNSRQNTFE
GELIMALCRHLILQGYNSDKITVLTPYSGQFFVLKKLQRKHHVCQGVHICIVDNFQGEEN
DIILLSLVRSNEKGQVGFLRKENRVCVALSRAKHGLYIAGNMDQLTASTDLWTKIKEDLT
RNKAIGNALTLRCENHPEQRTSVSSGDDFLEKCPEGGCLKACSTLLPACNHRCPKICHMT
EQDHKNVKCPQPCPKMCKRNHCCQQKCGEACRPCAVLINKTLPCGHTHKVKCHEYERKDF
LCPNVVPKQLPHCKHEVEMQCHRNPATFPCPIPCDTRLECGHQCPQKCHTTSDPDHLEFK
CEQPCTRTPEGCGKAHRCQKPCWEKCGPCMEYVKKIKECGHRHTTNCYVKTEDIFCKHDC
RKLLPCQHPCPRRCSEECGGCKIKVKKIVPDCRHEIQVECSQPPLKSSCKNRCILTLPCS
HPCRALCCEACTKECQVLVKTKNVCPRGHDIKMPCYLQDRSGKEAWAFCSEPCGEVLDCD
HPCGGQCGSCLYGRLHIACAKKCERTLPCGHVCKADCSAECPPCTDACPLKCKHSRCRKK
CGEPCTNCQEKCLRSCQHQTCEALCSRKCSVPPCKKPCPKRLRCGHPCVGYCGDPCPPLC
RICDKDTLTEILFGSEDEEDARFVLLEDCRHVIEADGLENWLSGDDGEISMKKCPRCQSP
IYNNRRFHDLILKGYENIRELKCKYYTEKPVIQQQDIEQILSGASTYADFHEEVRQIRKS
IRQDPLNRASKKIKYLSDSELVLFKFQASVLERLSELLNQHPDLRRPLKLEAEFLLKRAM
SQKLRISRQMMEEITCELQRLVLLPAYWKVLERFRQTKVEALDRIRNRLARYFHPCRKFD
SRTEGKVRGLLNESKKFIGSLGISEEERLQIVGAVGLKQGHWYKCPNGHIYCIGECGGAM
EESKCLECGETIGGRNHALRDGNAHAGEMDGSRFAAWSDQANMANYVFE
NT seq
6450 nt
NT seq
+upstream
nt +downstream
nt
atggaagactatgatgctggctgggatgagcttaacgagcagtttactccctctgcttct
tttgaaaaccgacgacttagatcccctacacacagacgtccgccaaggccgcccagtcaa
cgcggtaagagcactgggttgaaccgtcagccgggaacaggtcctagaccgtttagtcaa
cgcggtaagagacccgagttgaaccggcagccgggaacaggtcccagaccgtttagtcaa
cacgacaagagacccgagttgaaccggcagccgggaacaggtcccagaccgtttagtcaa
cacgacaagagacccgagttgaaccggcagccgggaacaggtcccagaccgtttagtcaa
cacgacaagagacccgagttgaaccggcagccgggaacaggtcccagaccgtttagtcaa
cacgacaagagacccgagttgaaccggcagccggtcccacgtcccagaccgcttagtcaa
cgcgacacgagtacgttgttaaataatggcccagcaacagtttttcggaaccaaggtcga
gaatcatccggcgctggtagtcggacacgatccaaggagtatgctgtaggggaacatgtg
gaacgtcagcacagtgaagagactgctgagacagacactgctccatacaataacaagaag
agaggaaacagaagaaagcgagaaaatcccatgggatataaagtcctagaaagtatgctt
gccttgtatccagaccaagttgtactgaaacttctaactgagcattcaggatatgatctc
ttgatcgggaatgaggatagcatttctgatgataaaatggtcctgcttatgcaagttctc
tgccacgcatccaaggcacaagttggccgagaaaacttgaattctcttcttgttaaaact
tttaacacaaaattcattaatcacctgataaaattctcaatggtgattggatttcagtgt
acaggtgaccatgagaaaacattaaaatattttgaagacttgtcagctgtcctacataca
tatgctcatacaatgccaactagggctgtggatcacctcctgccgctgatcgatagttca
gttatgatttgtcagaggttatcattcccggaaattgtgaggcaaaatgaagaaacaaaa
gccttcctggaaagtgaaaaaatgaaagtaggaaagcaacccaatcaagaaaggaaaaca
aacagagggagatggctggacgatctacctcctccggataacttccgagatctccctgtc
atacctactgctcaagacatcaacgatgtaggcacaccttatttgagagcaaacataact
ggaggaggttataaaaatgttgaccactacttggatgtgcaatttcggctcctcagagaa
gattttgtaagaccccttagaacaggtattcaagaatttagggtcgatgcacattctaaa
aactcagatattaggatttataggaatgtgaaagttgtggggactgacataaaaaatgga
gatgtggtccactatgttgaaataccatttaagaagaatctgaagattgaaaacacaaaa
agactattgtatggtaacctcttgtgttttagtacagacaattttaagaccctaatactc
gggtcagtagcagaaagaaacatggaagatctgaagaaaggtaaacttggtgtcaaattt
gaaagtgatattgataaccaaggaaaactatgggtaatggctgaatcaagaacgtatttc
atggcttacaaacatgtacttacagctctacaaggaattacaactgattcctttcctttg
caagaattcataatcaatgtcacacaggagaaaatatatcccagttatttaactcgacag
accacctatgatcttcgggtatttaagtattcaacaatgatgaaaaaatcagagacaatc
agccagctctttgacagcaaagataatgagagacgcgatgataactggcctggagttcct
cgtttgcagacagtgccactcatggcggaccttgagttttggccttcagagatagatctg
ggtctggatgcgtctcagcggagagctctgaggagtgcacttaccaacaaactcgccatc
attcagggtcctccaggaacaggaaaaacgtttattggactcaagattacacagacgctt
ctccacaatagcgaattttggaaaaaaagacactcacctatattggtagtgtgtttcacc
aatcatgctcttgatcaatttcttgagggaattgcaaaattcacaaaaagcattgtccgg
gttggctcaagaacgaaaagtgaggtgattagtgactttcaaataagaacacttataaat
gttgttaaaaagagaagacaaatgcctgaagatgtttacgagctgaatcagactaggtac
caagatgcattagtggcagagaaggaagtaaagcaatggaagtcagtattggaagagact
gaaaatccacaaggcattcttcaaaaacgtgtctttctggctgaaaaagtgataacagat
aatattgcaagtcaaattcagaatatttctctaaggtcctggttgatggatccatcagtc
tttggaaaagaaagaactattggagatactgtcctagatgacccaaaggccccagcagat
gagaatgacgacgaactttggggcgatgctgaggaactcatggctgatgaggaaagtgag
aggatggtcgaaatggaagacgacttgaacacactgaagcatgccactccccgaagtgtt
ctagactatgaaatgaatatcaagaacttggagaaagagttgttggatctgaaatcggaa
gatgtggaagagatggacgaaagtctgcagtttagacataatctaaatgtaggaatgttg
aaagttctgaggcatggtcttcagatagtaagacgggactccagtgccgatttagagaga
gctgaaactaggttacatatcaagaatctgtctttcaaagatcgatggctcctctacaag
ttatggctcaagcgattgaataaaatagtaaaggaaaaatttgaaatagcagaaaaagag
ttccagaggtgttcaaaggccttggaagagattcgcatccaggaaatgcttcatatcatg
agacatgcagcagtggtgggcatgacgacgacgggagcagctcagaacacagccgtccta
caagcacttcagccatccatagtgatcatagaagaagctgctgagattctagaggcacac
gtcatcacttctctttccagaaagtgcaaacacctaataatgattggtgatcaccagcaa
ctgcagccaagtgccaccgtatacgaactggccactaaatacaagctggaaatttctttg
ttcgaaaggatgattaagaatggtctaccttatgagactttggattatcaacaccggatg
aggcctgaaatatcctccttgcttgtcccatccatttatccgcacctgaagaaccatccg
tcagtggctgagtatccgcgcatcaagggagtcactacaagcctcttcttcattaaccac
aatcatcatgaagacaagggcatagctgatgacaacaacagtcgtcaaaatacgtttgaa
ggtgaactcatcatggctctttgtcgccacctgatacttcaaggttacaactcagacaaa
ataactgtcctcacaccatactctggacagttctttgtccttaaaaagttacaacggaaa
catcatgtgtgtcagggagttcatatctgcattgtggataatttccaaggagaagaaaat
gacatcatactactgtctcttgtgcgcagtaatgagaaaggtcaagtaggatttttacga
aaggaaaatcgagtctgtgtggctctctctcgagccaagcatggcctctacatcgcaggt
aacatggatcagctgactgcctctactgatctttggacaaagatcaaagaagatcttaca
agaaacaaggcaataggcaatgccttgacactgcgctgtgaaaaccacccggaacaacga
acttcagtgtcaagtggagatgactttctagaaaaatgtcccgagggaggatgcttgaaa
gcgtgctctaccttgctgccagcatgtaatcacagatgccccaagatttgtcacatgaca
gaacaagaccataagaatgtaaaatgcccacagccgtgtcctaaaatgtgcaaaaggaac
cattgttgtcaacaaaaatgcggggaagcatgtagaccatgtgcagttctaattaacaaa
actctcccatgtgggcatacccataaagtgaaatgccatgaatacgaaaggaaggatttc
ttatgcccgaatgtagttccaaagcagttgccacactgtaaacatgaagtagaaatgcag
tgtcatcgcaacccggcaaccttcccttgtccgattccatgcgatacacgactcgagtgc
ggacatcagtgtcctcagaaatgccacaccaccagtgaccctgaccatttggagttcaag
tgcgaacagccatgcactcgcactccggaaggttgcggtaaagcccatcgttgccagaaa
ccgtgctgggagaagtgtggcccttgtatggaatacgttaagaaaatcaaagagtgtggc
cacagacacacgactaactgctatgtaaagacagaggatatcttctgtaagcacgactgc
agaaaattgttaccatgccaacacccatgcccgagaagatgcagcgaagaatgcggaggc
tgtaagataaaagtcaagaagattgtaccagattgtcgtcacgaaatacaggttgagtgt
agccagcctcctctgaagtcaagctgtaaaaaccggtgcatcttgacccttccttgttcc
cacccttgccgcgccctttgctgtgaagcgtgtaccaaggaatgtcaagtactggtcaaa
accaagaatgtctgtccaaggggtcatgatataaagatgccatgttatctccaagacaga
agtggaaaagaagcctgggccttctgcagcgagccatgcggtgaagtgcttgactgtgac
cacccgtgtggagggcagtgtggctcctgtctatatggacgactccacatagcgtgtgca
aagaaatgcgagagaactcttccatgtggacatgtttgcaaagcagactgcagtgctgag
tgtcccccttgtaccgatgcttgccctctgaagtgcaagcacagccgctgcaggaagaaa
tgtggagaaccatgcaccaactgtcaggagaaatgtctaagaagttgccaacaccaaacc
tgcgaagcactctgcagtcggaagtgctcagtcccgccctgtaaaaagccttgcccgaaa
aggctacggtgtgggcatccatgcgttgggtactgcggtgatccctgcccgcctctgtgc
cgcatatgtgacaaggacactcttacggaaattctctttggctccgaggacgaagaagat
gcaagattcgtgctgctggaagactgtcgccatgtgatagaagccgacggacttgagaat
tggctctctggagatgacggtgaaatttccatgaagaaatgcccacggtgtcagagcccc
atctacaacaacagacgtttccacgacttaatcttgaagggttatgaaaatatccgggaa
ttgaaatgcaagtattatacggagaaacctgtcatccagcaacaggatattgaacagatt
cttagtggtgcatccacgtatgccgacttccatgaagaggtcaggcaaataaggaagtcc
atccgccaagacccactgaacagggcttctaaaaaaatcaaatacttaagtgacagcgaa
ttggttttattcaagttccaagctagcgtcctagaaaggctctcggaattgctcaatcag
caccctgatttacgccgtccgctgaagttagaagccgagttcttactgaaacgagccatg
agccagaagctacgaatttctcgacagatgatggaagagattacttgcgaactgcagcgt
ctggtacttctcccggcgtactggaaggttctcgagcgtttccggcaaaccaaagtcgag
gctctggataggatccgaaatcgacttgctagatatttccacccgtgtcgaaagttcgac
agtcgtacggaggggaaagtccgaggcctcttgaacgaaagtaagaaattcattggcagc
cttggaataagtgaagaagaaaggctgcagatcgtcggggccgtcggactcaagcaaggc
cactggtacaaatgccccaacggccatatttactgcatcggggagtgcgggggagccatg
gaagagtcgaaatgcctagagtgtggagaaacaatcggtggcagaaaccatgctctccgc
gatggcaatgcgcacgcgggagagatggacggatcgcgctttgctgcctggtctgaccaa
gccaacatggcaaactatgtctttgaatga
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integrated database retrieval system
