Penaeus vannamei (Pacific white shrimp): 113823903
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Entry
113823903 CDS
T06111
Symbol
chb
Name
(RefSeq) CLIP-associating protein 2 isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pvm03036
]
113823903 (chb)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pvm04812
]
113823903 (chb)
Chromosome and associated proteins [BR:
pvm03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
113823903 (chb)
Cytoskeleton proteins [BR:
pvm04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
113823903 (chb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
CEP104-like_TOG
HEAT_EF3_N
MMS19_C
PPP2R1A-like_HEAT
Phage_blade
HEAT_DAAF5
Motif
Other DBs
NCBI-GeneID:
113823903
NCBI-ProteinID:
XP_069987924
LinkDB
All DBs
Position
17:complement(6992160..7126000)
Genome browser
AA seq
1569 aa
AA seq
DB search
MPSVSPTDPGLLEGSPPPSVSPAGCVELEGSLAGLGDMPLTSQCSVESLGSLDSGHSSSA
GNGATESHAGSPSPGPIISTPPPAATSPTPSAFSTPTSPRTHLEDRCDSSGRISVASMGS
SQDRPPSGINRSLSNTSTASVASTDTVDTINSTDTINSAATSATNNTSTSTSTSTSSTTI
VTPIKSKEELDSYIDHLDSLWSQEDEWIMIFDNLIRNTEASTRSRRHTHHYSHYHNSGTT
SNHSSPYHSPYKKGKGDDEVDRASVKSGGSKSRASSAPPVRRSVLGAALPPKSAGAGESG
GGGGPRTTIKRVPSISRGRAGSSSSSTAPAGAVDEASFFASFEDVPKVNIYSARELEDNL
TKIREVISSPSNDWDKRVDALKKLRSLLIAGANGYEEFYPHLRLLEPAMQLSIKDLRSQV
VREACITVAYMSQELHHKVDHLCETVLPNLIYLIPNSAKVMASSGVVTIRFIIQNTHHHK
LIPILLREISSKNREIRKVLCEVLDQLVHTWPTHSMEKHVLILAETIKKGITDADPEARA
FSRKAYWGFAGHFKDEADKLLNSLDPSYKKMLQGEMSMSNSSSSQSLHNSQKSAGARPGW
SRSSSTAGSTENLSGMSSRLPQSGMRRSAIPTPASHRPQDSSDSPAPSHTPTNFRSNSAI
DLQAARRAQARSQYAQAQRLKVGSGASLRTEGEDKARPRKTSDHPPISSITSPDRMGRPR
SRGGVSQSQPGSRSGSPSSRLSYATYSSPGDSGTLGRSRRRSGIPRSTGTSREPSPSRYS
GLSGISPSKSRSRSISGASEMPPQVPGKSRQVMAQKILQQSREAESALADALVSLPPGGG
VLRERSNYPGRVDRCDRAGGEFQAYRQPRSPNRKMYSKAFEDQSDNDSETSSICSERSFD
SCRRSDQFWYGSQQRILKEVWEPTVKMQDVSDIILNCASTHWGDRKEGLMALQAFLRGSH
MLTGSELKRVTEIFTKMFMDAHTKVFTLFLDTLMELIMVHKADLGDWLYILLTRLLNKLG
SDLLGSVQTKIHKTLDLVRDSFPCDQQFIVLMRFLVDQAQTPNSKVKVATLTYLKCLVDV
MDRGDLTASPDTPMALAKILTWTADQKSLDIRRAASACFIAMFNCNITEFTALLQQLPSA
CQSTASQIIQSHLKRAASLDASPSSLPTRTPPSAGGTPVLQSPNTSLPRSHRSSRHNTID
FDDTENLNPEEVYRSLKRTTAEIQNYSFDLDLSSRRDSLEKHRDSTSQVFLRQDSGISQL
SAGGGDLRTIDTVDDKGVEDTNGILSGRSSSVSSPTHRNLSMMSDSSRNGLDTLTDDDLG
RGDGQESDAEVMSGVVAELGNTEEGRTAEKRAALTSLIRLARTGSTLVWNENFRAVLRLL
LESLVCDDGGQRALVLAVLTEMMRRSPLVHHFLSFSELIILRVLNAHADKEKEVLRAASV
CAGTVAEILPPEVVIRVLKPLIQMGEYPVNQAAIKMLNKLVEAHQPSIVAAALPEIMPGL
IKAYDNKESCVRKASVFCMVALHNAVGEDAMRPHLESLTGSKLKLLNLYIKRAETQNSGA
SSPKSEPPP
NT seq
4710 nt
NT seq
+upstream
nt +downstream
nt
atgccttcggtgagccccaccgacccaggtctgctggagggctctccgccgccgtccgtc
agccccgccggctgcgtggagctggagggctcgctggccggcctgggggacatgcccctc
acctcgcagtgctccgtcgagtccctgggctccctggacagtggacacagctcctcggcg
ggcaacggcgccacggagagccacgcgggcagcccctcgcccgggcccatcatctccacg
cccccgcccgccgccaccagccccacgccctccgccttctccacgcccaccagcccaaga
acgcacctggaggaccgttgcgacagcagcggcaggatcagtgtggcgtccatgggctct
tcgcaggaccgtcctccttcggggatcaaccgatccctgtccaacacgtccaccgcctcc
gtcgcctccaccgacaccgtggacaccatcaactccaccgacaccatcaactcggccgcc
acgagcgcgacgaacaacacctcgacctcgacctccacctcgacctcgtccaccactatc
gtgacgcccatcaagtccaaggaggagctggactcctacatcgaccacctggactcgctc
tggtctcaggaggacgagtggatcatgatcttcgacaacctcatcaggaacacggaggcc
tccacccgctcgcgccgccacacccaccactacagccactaccacaacagcggcaccacc
agcaaccactcctcgccctaccactcgccctacaagaaaggaaaaggagacgatgaagtg
gacagagcgagtgtcaaatccggaggcagcaaatcaagagccagcagtgcccctcctgtc
agaagatccgtccttggggctgccctacccccaaagagtgccggagcaggggagagtggt
ggtggtgggggccctcgaacaacaatcaagagagtgccatctatcagtcgggggagagca
gggtcatcatcctcatctacagctcctgctggagctgtggatgaagcctcgttctttgcc
tcatttgaggatgttcctaaagttaacatttactctgcccgggaactggaggacaacctc
accaagatcagggaggttatttccagccctagtaatgactgggacaagagagtagatgca
ctgaaaaaattgcgaagtctcttaattgctggtgccaatgggtatgaggagttttatcct
catcttcggcttttggaacctgccatgcaattgtctatcaaagatctcaggtcacaggtg
gtccgagaagcatgtatcactgttgcatacatgtcccaggaacttcaccataaggttgac
catttgtgtgagactgtcctgccaaatcttatttacttaatacccaacagtgccaaggtg
atggcatcctctggcgttgtcacgatccggtttataattcaaaacactcatcaccataaa
ttaattcctatccttttgcgagagatcagtagcaagaatagagagatccgcaaagtcttg
tgtgaggttttagatcaattagtgcatacgtggcccactcattctatggaaaagcacgtt
ctcatccttgccgagacaattaagaagggaatcacagatgctgatcctgaagcaagagcc
ttttccagaaaagcatattggggctttgcgggccacttcaaggacgaggcagacaaactg
ctgaactcactggacccgagctacaagaagatgcttcagggagagatgagcatgtccaat
tcatcttcatcacagtctctgcacaactcccagaagtcagctggagcgcgtcctgggtgg
tcacgttcttcttcgacggctgggagcacagagaacctgtctggaatgtcatcaagactc
ccccaaagtggcatgcgacgctctgccatccctaccccagcctcccaccgccctcaggac
tcctcagactcccccgccccctcccacacacccaccaacttccgctccaacagtgccatt
gacctgcaggccgcaaggcgtgcacaggctcgttcacagtatgcccaggcccagagactc
aaggtgggctctggagcgtcactacgaactgaaggagaggacaaagcacgtccaagaaaa
acgtccgatcatccgcccatcagctccatcacatccccagaccgcatgggaagacccaga
agccgaggcggagtttctcaatcacaacctggtagtcgcagtggatccccctcatccaga
cttagttatgcaacatactcttcacctggagactcaggtaccttaggccgctctagacgc
aggagtggaattccacgttccactggtacttcgcgagaaccttcacctagccgttacagt
gggctgagtggtatttcaccatcaaagtctcgttcaagatccatctcaggtgcctcagaa
atgcctccccaggtaccagggaaatctcgacaggtcatggcccagaagatcctacaacag
agtcgcgaagcagagagtgcgttagctgacgcactggtgagtctgccaccaggaggagga
gtccttcgtgaaagatcaaactaccctggtagggttgatcgatgtgatagagctggagga
gagttccaggcttaccgtcaacctcgttctccaaacagaaagatgtacagtaaagccttt
gaggaccaatctgacaacgatagcgagacctccagtatttgctctgaacgttcctttgac
tcctgtaggagaagtgatcaattctggtacggatcacaacaacgtattctcaaggaagtg
tgggagccaacagttaagatgcaggacgtgagcgacatcatccttaactgcgcgtcaaca
cactggggtgatcgaaaagaaggcttgatggctcttcaggcattcctacgtggctcacac
atgctcactggatctgagctgaagagggtcactgagatctttaccaaaatgttcatggat
gctcacacgaaggtgttcacactcttcctggacaccttgatggagctgatcatggtacac
aaagctgacctgggtgattggctttatattctacttacaaggttgcttaacaaattggga
tcagatctgctgggatctgtgcagaccaagatccacaaaaccttagatttagtcagagac
tcattcccatgtgatcaacaattcatcgttctaatgagatttctagtggaccaagctcaa
actccaaactccaaggtgaaggtggcaacgctgacgtacctcaagtgtctggtggatgtg
atggaccgcggtgacctcacagcatcccccgacactccaatggcactggccaagatcctt
acctggactgctgatcagaagtccctagacatccggcgggcagcttcagcgtgctttatc
gccatgttcaactgcaacatcacagaattcacagcacttttgcagcagctgccttctgcc
tgccaaagcacagcgtcgcagatcatccagagccacttgaagagagcggccagtttggat
gcctcaccctcttccctgcccacccgtacacctcccagtgctggcgggactcccgtgctt
cagagcccaaatacctcactcccacgctcgcaccggtcatcacgacacaataccattgac
tttgatgatacggaaaatcttaacccagaagaagtatataggagtttgaaacgcacaaca
gcagagatccagaactatagcttcgacctggatttaagtagtcgcagagatagtttagaa
aaacatagagattcgacgtcacaggtattcctccgacaggactctgggattagtcaatta
tcagctggtggaggcgaccttcgcactatagataccgtagacgacaagggtgtggaggat
accaatggcatcctctcggggagatcttcaagcgtttcgtcacccacacatcgcaacctc
tccatgatgtctgactcttcaagaaatggactcgacaccctcacagacgatgatctcggt
agaggagatggacaggagagtgatgcagaggtaatgtctggtgttgtggcagagctaggt
aacacagaggagggacgcacagcagaaaagcgtgccgcgctgacatctctaatacgacta
gcgcgcacaggctccactctagtctggaatgagaatttccgtgctgtgctgaggttgttg
ttagagagtcttgtgtgtgacgatggaggtcagcgtgccctggtgctagccgttctgaca
gagatgatgaggagaagtccacttgtgcatcacttccttagtttttcggagcttatcatc
cttagggtccttaatgcacatgctgacaaagaaaaggaagtccttcgagcagcaagtgtt
tgtgcgggaactgtagcagaaatccttcctcctgaggtcgtgattcgggtgttgaagcct
cttattcaaatgggagaatatccagtgaatcaagcggccatcaaaatgctcaataaactg
gttgaagcccatcaaccatccattgttgctgcagcattgcctgaaatcatgcctggactc
attaaggcatatgacaacaaggagtcttgtgtacgcaaggcttcagtgttctgcatggta
gcattgcataatgccgtgggagaggatgcaatgcgaccacacttagagagtctcacagga
tccaagttgaagctcctcaacctgtacatcaagcgtgccgagacccagaattcaggagca
tcttctccaaagtctgaaccaccaccttaa
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integrated database retrieval system
