Penaeus vannamei (Pacific white shrimp): 113823963
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Entry
113823963 CDS
T06111
Name
(RefSeq) recQ-mediated genome instability protein 1 isoform X1
KO
K10990
RecQ-mediated genome instability protein 1
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Pathway
pvm03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
113823963
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pvm03400
]
113823963
DNA repair and recombination proteins [BR:
pvm03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
113823963
FA (Fanconi anemia) pathway
113823963
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Gene cluster
GFIT
Motif
Pfam:
RMI1_N_C
RMI1_C
RMI1_N_N
tRNA_anti-codon
Motif
Other DBs
NCBI-GeneID:
113823963
NCBI-ProteinID:
XP_027232502
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Position
14:16243533..16270568
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AA seq
672 aa
AA seq
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MAVTTNVKNFLKNKHITVPDEWITACVEWVQSENPGLNLSNSRLLNDKVYEQWLHADLTE
LGTCSLPFGLSQKRTAPLSGYFALQINSVRDVGQPAYAQLQRVRRADNENARVSAEQSHQ
PAWEPKPSRMLIMQLTDGTSVVQGMEYRVIPALNHNLKPGTKILISGNITSRHGVLLLTR
ENMTVLGGEVESLLITNALENVLARKLGMEETQQPQQFEDIAPTQVPPSQASQYYPSQLN
PTVNRSQNNRGGGQQTLAANRSQNNVTPAPVIDLDDLGDDDFLDAEFEAALSQIESQASQ
SSSLGSQNRQMRTNSNNQRDIGHDRNSANVRAGNGQAGNRNSGVDEDFEMDVDDSFFNDD
FDEDVVLASGRQAQQQSTAKPSSSGFSQQRNSLQSQASSNVFAGTSSKSSNSHVRPSLSQ
AARAKTAKPKQSSLKSFLTRPEESEMVTGRSNSPVSVYTIDDDDFMDDISLDTDDSMNIS
VSKTSANQSLALKLKSASSSKINEFKTPGAPVSKKQENRSVADTVKQEPPFSYLCFLPER
PTVTKEIVVKGFIMTLTSRLEQVEGKWKLTVIINDGTASCEVDIEDQILQNLIGMSTEEM
NMKKIEARTNPALKAQLAKAVSGCQRQLISLCSLLHIRVSPSSARPKLTAINAVENAMVQ
QLAQRIYMFSQK
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atggcagtgacaactaatgtcaaaaacttcctgaagaacaagcacataacagtgccagat
gagtggattacagcttgtgttgagtgggtgcagtcggagaatccaggactaaatttatca
aactcaagactactgaatgacaaagtctacgagcagtggcttcatgcagatttaacagaa
cttggaacatgctctttgccgtttggcttatcccaaaagaggactgcacccctgtcaggt
tattttgctttacagataaatagtgtacgagatgtggggcagccagcctatgctcagttg
cagagagtgcgccgggctgataatgaaaatgcgagagtcagtgcagaacagtcacatcag
cctgcatgggaacccaagccatcaagaatgctcataatgcagttgacagatggcacaagt
gttgtacaggggatggagtaccgagtgattccagctctgaaccacaacctgaagcctggt
acaaagattctcatttcgggaaacattacctcaagacatggagtacttctgctaacccgt
gagaacatgactgtgttagggggagaggtagagtccttactcataacaaatgctctggag
aatgttcttgctcgaaagctaggcatggaagagacacaacagccacaacaatttgaggat
atagctcccactcaggttcctccaagccaagcctcccagtactatccatcgcagttaaat
cctacagtaaacaggtcccaaaacaacaggggtggaggacaacaaactttggcagccaac
agatcacagaataatgttacgcccgcaccagtaattgacttagatgatctgggtgatgat
gattttcttgatgctgagtttgaggcagccttaagccagatagagagccaggcatcacag
tcatcatctttaggtagtcagaatagacagatgaggactaacagtaataatcaaagagat
attggacatgatagaaacagtgctaatgtaagagcaggaaatggtcaggctggaaataga
aactcaggtgttgatgaagactttgagatggatgttgatgattccttcttcaatgatgat
tttgatgaagatgttgtcctggcatctgggagacaggcacaacagcagtctacagctaaa
ccatcctctagtgggttttctcagcaaagaaactcattgcagtcacaagcttcttcaaac
gtttttgctggtacatcatccaaaagctctaattcacatgtaagaccaagtttaagtcag
gctgctagagcaaaaaccgccaaaccaaaacaatcaagtctcaagagctttcttactaga
cctgaagaatcagaaatggttactggaagatctaactcaccagtttctgtgtacactata
gatgatgatgattttatggatgatatttccctagacactgatgattccatgaacatatct
gtttctaaaacttctgcaaatcagtctttagcattaaagttgaaaagtgcttcatcaagc
aagattaatgaattcaaaactccaggagctccagttagcaaaaagcaagaaaacagaagt
gtagctgacactgtcaaacaggagccacctttcagctacttgtgcttcttgccagaaagg
cctacagtgacaaaggaaattgttgtaaagggtttcatcatgactttgacgtcacgactg
gaacaagtggaaggcaaatggaaactgacagtcatcattaatgatggaacagcctcatgt
gaagtggatatcgaggaccagatcctgcaaaaccttattggtatgagcacagaggaaatg
aacatgaagaaaattgaagcaaggaccaacccagccctgaaggcacagttggctaaggca
gtcagtggttgtcagcgtcagctgatctcactctgtagtcttcttcacatcagagtgtcc
cccagttctgcaaggcccaaactaacagccatcaatgctgttgaaaatgcaatggtacag
cagctagcacagaggatatatatgttttctcagaaataa
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