Penaeus vannamei (Pacific white shrimp): 113824052
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Entry
113824052 CDS
T06111
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) endonuclease 2 isoform X1
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pvm03400
]
113824052
Enzymes [BR:
pvm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
113824052
DNA repair and recombination proteins [BR:
pvm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
113824052
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Exo_endo_phos_2
DUF3340
Motif
Other DBs
NCBI-GeneID:
113824052
NCBI-ProteinID:
XP_069978810
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Position
6:19777203..20351795
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AA seq
607 aa
AA seq
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MLVRILSWNINGLRSFKTNMKQFLDSLEADIICLQETKVTRDMLEEPQAIVEGYSSYFDF
SRKKSGYSGVATFCSHRSTPTHALEGLTGKHAGELFDGGGTVEVLPGQWKEEELKNLDCE
GRAVITQHLLKDTEGKELRIAVINVYCPHVDPEKPERRIYKLRFYELLRQRAAAIRATGC
HVIIVGDINTSHRRIDHCDPDDSEDFENRLGRRYLDMMLLPIYKNEQQYETSSTDQKARV
DSAQNNYMCSSQLGKIDGMIKISDRLKLAKNRSSSLTEGSDYSRAEVNSKTREEGYGGEQ
QSDESLLSSSTNFQVVDTFRYFYPLKEKAFTCWHTLSNSRATNYGTRIDYIFCDKDFLTY
LRDGQVLQEVLGSDHCPVAIVINGEITPAAKLPSSCTKFYPEFQGLQQKLSSYFQPKSSS
TKANQNFSLQKNESSNKTWPLNGVKRKAEVTKKSARKMVCTEKQKKLSSFFTVKQNSLID
TDNEKNENPTSQNHADVNFVGHNNKEIKSDDSQDISSHELPLSQGSKGNPVSGSQKPLTL
VKNSGWNFLMNGPKPPPLCPGHKEPAVLRTVKKKGPNMNRQFYACARGAGKEGDPEAQCN
FFKWVGK
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgttagttcgcatcctcagctggaatatcaatggattacggtcatttaagactaatatg
aagcaattcctggattctttagaggcagacatcatttgtcttcaagagactaaagtaacc
cgtgacatgctagaagaacctcaggctattgttgagggatattcatcttacttcgacttt
tccagaaaaaaaagtggatactctggggttgccacgttctgctcccatcgctccactcct
actcatgctctggaaggcctaacaggcaagcatgctggtgaactttttgatggtggaggt
actgttgaagttcttccagggcagtggaaggaggaggagctgaagaacttggactgtgag
ggacgagctgtcatcacacaacatcttttgaaggatacagaaggaaaagagttgagaata
gcagtcataaacgtatactgcccacatgtagaccctgaaaaaccagagcgtcgcatctat
aaattaagattctatgaactcctgcggcaaagggcagctgccatcagagctactggctgt
catgttattatagttggggatatcaacacttctcacagaagaatcgatcactgtgaccca
gatgacagtgaggattttgagaatcgtctaggcagaagataccttgatatgatgctcctg
cccatatacaaaaatgagcaacagtatgaaacaagtagtactgaccaaaaagcaagagtt
gattctgcccaaaataattatatgtgtagttctcagcttggcaaaattgatgggatgatc
aaaattagtgacaggctcaaattagctaagaaccgttccagtagcctcaccgaaggaagt
gattactcaagagcagaagtgaatagcaagacaagagaagaaggatatgggggtgaacag
cagtcggatgaatctctactttcttcaagcacaaacttccaagtggttgatacattccga
tatttttacccactgaaggagaaagcatttacttgttggcataccctctccaattctaga
gctacaaattatgggactaggattgactacattttctgtgataaagattttttgacatat
ttgagagatgggcaggttctgcaggaagttttggggagtgatcactgccctgttgccatt
gtaataaatggggaaataactccagctgctaaactaccttcatcatgcactaaattctat
ccagaatttcaaggcctgcagcagaaactgtcatcatactttcagcctaaatcttctagt
acaaaggcaaaccagaacttcagtttgcaaaaaaatgaaagttcaaataaaacatggcca
ctaaatggagtcaaaagaaaagctgaagttactaagaaatcagccaggaagatggtatgt
acagaaaaacaaaagaagttgagctcattctttactgttaaacagaattccttaattgat
acagataatgaaaaaaatgaaaacccaacaagtcaaaatcatgctgatgtgaattttgta
ggtcataacaacaaggaaataaaatctgatgattcccaggacatctcatctcatgaatta
cctctgtctcaaggaagtaaaggaaatccagttagtggatcacagaaacctctcactctg
gtgaaaaattcaggttggaatttcttgatgaacggcccaaaaccccctcctctttgtcca
ggacataaagaaccagcagtattaagaactgttaaaaagaaaggaccaaatatgaatcgt
cagttttatgcttgtgcaagaggagcaggaaaagaaggagacccagaggctcaatgtaat
tttttcaaatgggttgggaagtag
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