Penaeus vannamei (Pacific white shrimp): 113824082
Help
Entry
113824082 CDS
T06111
Symbol
ergic53
Name
(RefSeq) protein ERGIC-53 isoform X3
KO
K10080
lectin, mannose-binding 1
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Pathway
pvm04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
113824082 (ergic53)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvm04131
]
113824082 (ergic53)
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
pvm04091
]
113824082 (ergic53)
Membrane trafficking [BR:
pvm04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
ER-Golgi intermediate compartment (ERGIC) proteins
113824082 (ergic53)
Lectins [BR:
pvm04091
]
L-type lectins
113824082 (ergic53)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lectin_leg-like
Bact_lectin
PsbQ
G1RFP
DUF501
Motif
Other DBs
NCBI-GeneID:
113824082
NCBI-ProteinID:
XP_027232633
LinkDB
All DBs
Position
30:3829302..3843313
Genome browser
AA seq
685 aa
AA seq
DB search
MDLCWSLALLLSLISFVLSQTQHRRFEYKYSFKGPYLAQKDNLVPFWTYSGNAIASEESV
RITPSLRSQKGQIWTKNPTNFEWWEVDVVFRVTGRGRIGADGLAIWFTDKPGVEGPVFGS
SDQWNGLGVFFDSFDNDNKRNNPYVMAMVNDGTKVYDHEHDGLSQQLGGCLRDFRNKPFP
VRAKIEYYKNVLTVKTQLIEYDYSKMEEEGDIGDENGTRYDEPIQPVEPYESSTTTTSPT
TTGAPLSEYDEYTTTASPDSSTTTNLPGDGSQSTTTAWWGSEEASTTISPESEIIAETEY
TQDAPESSHTFEEPLHVNSEGEMEAGWGWFGTSEATPTEEPSVTSTPKPNKKTRRRRRKK
TRRNRTKKSKKRLGSMSPLMIHNGMTNNEKDYEICMRAENVYIPPSGYFGITAATGGLAD
DHDVLKFLVTSLRSPEEMAVMQANAEEEERFRREFQEYQEKTKKARDEYVAQNPDSIRKE
AEEEYETGEQRELRQIFQGQGQIHDLIRNLHAKLDEIIGRQERTLGLVSAVHSGMGGQVA
PTGQVPPAQVGALPGDTIRRHEVDSILNNQRDIVATARDIKNFVNDIHQKSNQLLTNSQK
PQGSVQPVGYDLHVTLNEMKEGLNIVKRDLGTANQRLTSGPAGGCPPVSCVSTGMFITFM
VIQVVLLIGYIVYRDNKDAQAKKFY
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atggatctctgctggagtctcgcgttgctcttatctctcatatcgtttgtgctcagtcaa
acgcaacacagacgcttcgaatacaagtacagcttcaagggcccttacttggcgcagaag
gacaacctcgtgcccttctggacgtacagtggaaatgcaattgcaagcgaagagagcgtg
agaatcactccatctctgcggagtcagaagggacagatctggactaagaatcctacaaac
ttcgaatggtgggaagtcgatgttgtgttccgagtgacgggcagagggagaataggtgct
gatggcttggcaatctggttcacagacaaaccaggagtcgagggccctgtgttcggtagc
tcagaccaatggaatgggttgggtgtgttctttgattcctttgataatgacaacaagcgc
aacaacccctatgttatggctatggtcaatgacggtaccaaagtctatgatcatgaacat
gatgggctgagccaacaattaggaggatgtttgcgagacttccgtaacaagcccttccct
gtaagagcgaaaattgagtactacaagaatgtcctaacggtaaaaacccagctgatagag
tatgattattcaaaaatggaagaggagggtgatataggggatgaaaatgggactaggtat
gatgaaccaatacaaccagtggaaccatatgaaagttcaaccaccaccacctcccctacg
acaactggtgcccctttgtctgagtacgatgagtacacaacaactgcctctcctgactcg
tcaaccactacaaatttgcctggagatggctctcagtcgactaccactgcttggtggggt
agtgaggaagcatccacaactataagcccagagagtgaaataattgccgagacagaatac
acgcaggatgccccagagagcagccacacttttgaggaacctttgcatgtgaattcagaa
ggtgaaatggaggctggctgggggtggtttggcaccagtgaggccacaccaacggaagaa
ccatcagtgacctcgacacctaagcccaacaagaagaccaggaggaggaggaggaagaag
accaggagaaatagaacaaagaagagtaagaagaggctggggagcatgagcccgttgatg
atccataatggaatgacgaataacgaaaaggactacgagatctgcatgcgagctgagaat
gtctatattcctccaagtggatacttcggaatcacggctgccactggtggattggctgac
gatcacgatgttctgaagttcctggtgacatcactgaggtcgcctgaggagatggcagtc
atgcaggccaacgcagaggaggaagagaggttccgacgggagttccaagagtaccaggag
aagaccaagaaggcgcgtgatgagtatgtggcacaaaatccagattccatacgcaaggaa
gctgaagaagagtatgaaaccggagaacagagagagctgcggcagatcttccagggacaa
ggacagatccatgaccttattcgcaatctccatgccaaattggacgagataattggtcgc
caggaacgtacactcggccttgtgtctgcagtccacagtggcatgggagggcaagttgct
cctacaggacaggtacctcctgcacaggttggggctctgcctggggacactatcaggcgt
cacgaagtcgactccatcctgaataaccagagggacattgtggcaacagcaagagatatc
aaaaactttgtgaatgatatccaccaaaagagcaaccagttattaactaacagtcagaag
cctcagggctcagtccagccagttggttatgatctgcatgttactctcaatgagatgaag
gaaggtctgaatattgtaaaacgtgatctcggcacagccaatcagcgtttgacttctggg
cccgcaggcgggtgccctccagtcagctgtgtctcaactggcatgttcatcacattcatg
gttatccaggtggtactgctgataggatatatcgtatacagagataacaaagatgctcaa
gcaaagaaattttattag
DBGET
integrated database retrieval system
