Penaeus vannamei (Pacific white shrimp): 113824224
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Entry
113824224 CDS
T06111
Name
(RefSeq) zinc finger matrin-type protein 2
KO
K12848
U4/U6.U5 tri-snRNP component SNU23
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Pathway
pvm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113824224
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pvm03041
]
113824224
Spliceosome [BR:
pvm03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
113824224
Complex C
U4/U6.U5 tri-SnRNP related factors
113824224
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_jaz
zf-met
zf-U1
C2H2-zf_KIN17
zf-C2H2
Herpes_gp350_A
DUF4250
Exonuc_VII_L
Motif
Other DBs
NCBI-GeneID:
113824224
NCBI-ProteinID:
XP_027232763
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Position
18:35405694..35412969
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AA seq
203 aa
AA seq
DB search
MSGSGSSSGPEFRRKWDRDEYESIAQQRIRAERDAAQAQKQKIAPVKRELLKQREYKVDI
DSKLGKSQVITKTTPASQSGGYYCNVCDCVVKDSINFLDHINGKKHQRNLGMSMRVERSS
LDQVKKRFDMNKKKLEEKKKDYDVEQRMQELKEEEEKLKEYRREKRKERKRKADSSIDED
QGSSMDPEMAKIMGFSSFSSFKK
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggctcaggatcaagttcagggccagaattcaggaggaaatgggaccgagatgag
tatgaatctattgcacagcagcgtatacgagctgagcgggatgcagctcaagctcaaaaa
cagaagattgctccggtgaaacgcgagttgttaaaacagcgtgagtacaaagtggacatt
gactcaaagcttggcaagagccaggtcatcactaaaactactccagcatctcaatcagga
gggtattattgcaatgtgtgtgactgtgttgtgaaggattctataaacttcctcgaccac
atcaatggcaaaaaacatcaaagaaatcttgggatgtccatgagagttgaacgatcctct
ctggaccaagtgaaaaaacgttttgatatgaataagaaaaaattagaagaaaagaagaaa
gactatgatgtagaacagagaatgcaagaattaaaggaagaggaggagaagcttaaagaa
tatcgacgtgagaaacgaaaggaacgaaaacgtaaggcagattcctcgatagatgaggac
caaggatcaagcatggacccagaaatggcaaaaataatgggtttctcttcgttttcatca
tttaagaaatga
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