Penaeus vannamei (Pacific white shrimp): 113824353
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Entry
113824353 CDS
T06111
Symbol
Pif1
Name
(RefSeq) ATP-dependent DNA helicase PIF1 isoform X2
KO
K15255
ATP-dependent DNA helicase PIF1 [EC:
5.6.2.3
]
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pvm03032
]
113824353 (Pif1)
03029 Mitochondrial biogenesis [BR:
pvm03029
]
113824353 (Pif1)
Enzymes [BR:
pvm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
113824353 (Pif1)
DNA replication proteins [BR:
pvm03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
113824353 (Pif1)
Mitochondrial biogenesis [BR:
pvm03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA maintenance factors
113824353 (Pif1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIF1
AAA_30
Pif1_2B_dom
AAA_19
AAA_22
AAA_24
Mg_chelatase
AAA_16
AAA_5
AAA_7
UvrD_C_2
PhoH
ABC_tran
T2SSE
AAA_17
Motif
Other DBs
NCBI-GeneID:
113824353
NCBI-ProteinID:
XP_027232904
LinkDB
All DBs
Position
33:4501730..4511275
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AA seq
623 aa
AA seq
DB search
MKTPDKEPALQAPILPCTLVVETLNAGGTVKKSTTYKQIKLILGRNEFRDLILRLDSPKH
SLKFPLRDFVLHKRFLKEGKATISLKDVNLNLMIANAPPNQLLVFMKTLAGKHAVTGVNG
GVINARKRLLSTVPKSFEEISPLTFNEYETVRKNGGKMPLKERAANVPDASPVSSKRKRD
SKDASGSSTPKVPRFLNPLVLTSEQKRVLQVVQSGLNVFFTGSAGTGKSFLLKRIVGALP
PDVTFVTASTGVAACQIGGTTLHAFAGIGSGKASIDQCIQLASRRVIAQQWKKCKHLIVD
EVSMVDGDFFTKLEAVGRAVRGNDKPFGGIQLILCGDFLQLPPVTRPGEKRVFCFQTNAW
DRCINLSMELTDVRRQDDQEFIDILQSIRLGRCKEEMVERLKQTEKNTVERDGIKATRLC
THREDVNHINQEHLKKLAGDNQVFQAVDSDPGLSSLLDSQTPVVAKLTLKVGAQVMLMKN
LDVGQGLVNGARGVVTGFKMGKEGNPIVRFLCGVTTEIKHEKWTVKGSGGIYLHRRQLPL
KLAWAFSIHKSQGMTLDCAEMSLSRVFEAGQAYVALSRARNLKSIRVLDFGPECVRAHPD
VLKFYQGLRRARYEEQQSIKQYF
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgaagaccccagacaaggagccagcactacaagcccccattttaccttgcaccttagtt
gtggagactcttaatgctgggggcacggtgaaaaagtcaactacttacaaacagataaaa
ctcatcttggggcgaaatgaattcagggacctgatactgcgtctagattccccaaaacac
tctctaaaatttccactgagagactttgtactccataagcgattcttgaaggagggaaaa
gccaccatcagtctgaaggatgtgaacttaaacttgatgatagcaaatgcccctccaaat
cagctgcttgtctttatgaagacactggctggaaagcatgccgtaactggtgtaaatggt
ggagtgattaatgcaagaaaacggcttctgtcaacagtcccaaaaagctttgaggaaatc
agtcctcttacttttaatgagtatgaaacagtgcggaaaaatggaggcaaaatgcccctg
aaggagagagctgcaaatgttcctgatgcttcccctgtttctagtaaacgtaaacgggat
tcaaaggacgcctcaggttcctctacacctaaagttccacgttttcttaaccctctagtc
cttacatctgaacagaaacgcgtgttgcaagttgtacagtctggcttaaatgtatttttt
actgggagtgctggtactggcaaaagttttttgctgaagcgtattgttggtgctcttcct
cctgatgttacttttgtgactgcaagtacgggtgttgctgcctgtcagattgggggaact
acattacatgcatttgcaggcataggcagtggcaaagcttctattgaccagtgcattcag
ttggcatcaagaagagttatagctcagcagtggaagaaatgtaaacatcttattgttgat
gaagtgtcaatggttgatggtgattttttcacgaaactggaagcagtagggagagcagta
agaggaaatgacaagccttttggtggaatccagctgattttgtgtggggatttcttgcaa
ctccctcctgttaccaggcctggggagaaacgtgtcttctgcttccagacaaatgcttgg
gatcgctgtattaacctaagcatggagctgactgatgtgaggaggcaagacgaccaggaa
tttattgatatactgcaatctattcggctggggaggtgcaaggaagaaatggttgaacgc
ttaaaacaaacggagaagaacacggtagaaagggatggtattaaggctactaggctatgt
actcatcgtgaggatgtaaatcacattaatcaagaacatctaaaaaaattagcaggtgat
aaccaggtcttccaggctgttgacagtgatcctggtctgtcatctttacttgattctcaa
acccctgttgtagcgaagttaaccctcaaagttggtgctcaagtcatgttgatgaagaat
cttgacgttggccaaggcttggtcaatggtgcaagaggagttgttacaggcttcaagatg
ggtaaagaagggaaccccattgtaagatttttatgtggtgtcacaacagaaattaagcat
gagaagtggacagtcaaaggttctggtggtatttatctacacagaagacaacttcctttg
aagttggcgtgggctttctccattcacaagtcgcaaggaatgacactagactgtgcggaa
atgtctctctcgagggtgtttgaagcgggtcaagcctatgttgccctgtcacgtgcaaga
aacttgaagagcatccgtgtgctggattttggacctgaatgtgtgcgcgctcatcccgat
gttctcaaattctaccagggtctaagaagagcccgttatgaggagcagcagtctataaag
caatatttttaa
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