Penaeus vannamei (Pacific white shrimp): 113824456
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Entry
113824456 CDS
T06111
Name
(RefSeq) rab GTPase-binding effector protein 1 isoform X1
KO
K12480
Rab GTPase-binding effector protein 1
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Pathway
pvm04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
113824456
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvm04131
]
113824456
Membrane trafficking [BR:
pvm04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
113824456
Protein recycling
Rab4 associated proteins
113824456
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rab5-bind
Rabaptin
FYVE
Fez1
FYVE_2
betaPIX_CC
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
113824456
NCBI-ProteinID:
XP_069971074
LinkDB
All DBs
Position
37:9807901..9874678
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AA seq
1005 aa
AA seq
DB search
MEEPGDSGEEKNAVEVLQAKVSELMERERKLLEEHTRQEADFGLRRAKLKELYLQKEEEL
RLQSDHTRAVEVELEVLRAQVRELQEELEEARSAVTIAQCTAENDIAVEQRKCQEEIATV
QQLMKEEVTNAVGQTGDRYEGEIKRLKKLTERLDAEKQHYRRLYERQLEDSYIRSKSESL
LSPGVISAVTKSLAKRVPSLSPSSALSTPEKTPSTGSAGPPLGTGVDAENLEDSMRKAQE
DAALLRSLVEPLEEEINALKEKIRAQDAQLRAHEAQQAASLHTADLVAPLLQGTDTQLVV
TQLDEKLKGMSNTLEAEKASRADLELYTAILNTQKTALNDDVDRLRTQLTELRQAFEDER
RQHRDLKHTWQRANDQFLEAQRLHLADMRRMQSLLTVDQQRKLEELQRSEEALAKSQASS
ISDIRPDLKPVGKPTSPQLSSLSPASRKRVTSPSPDLEVVADDERPYALVDLDDDHASST
TPQLGRGDLAGSEQSDDLSSEAETHSLPPDSLAPESLAPDSLLAERFSPDKMPQLTQDQQ
KALADVTPDSEGVTQSESILTPGDDDYVTIDLAAGGGSGTGSTGSRRVVSEVEWNLLNEE
IRRARSRIGRSCQLCSNYQTQLQKIQSEQRETEKQKVDLEKALDRYREDLDREARYRHVM
EDKWRTMAEDYEKKVAGVASVVEAATGKHNEVVAKFRATVTYLHDQLRVLTERREAAQQE
LTRLQKENDDLVGKHSQHSQQLQNEIINLPDNMEEMQLLLLRYREDIIAAKVSKEHLEET
LKSEILFLKDQVLAEQHEKNTIEDRLSSEIDQLREKVAVLESVESQMKAERRSRAESDAQ
LKELENRQSEAQLKSQQIISALKTQVAEQTQARARLEAEVVELRGRVSALQHDLDTSEAV
QRDFVRLSQSLQVQLEKIRQSEKEVRWQHEEDQEECNSCKQRFSAMGRRKHHCRHCGKIF
CNECVSKTVPSGPHRRPSRVCDVCHTLLVQDATPYFSSEPPHSPD
NT seq
3018 nt
NT seq
+upstream
nt +downstream
nt
atggaggagccaggagactcaggagaggagaaaaatgcggtcgaggtactgcaggccaaa
gtctcggagttaatggaacgggagcgtaaattattggaagaacatacgcgacaggaggca
gactttggactccgtagggccaaacttaaggaactctatcttcagaaagaagaggagttg
agactgcagtctgatcatactagagcagttgaggtggaactagaggtgctacgtgctcag
gtgcgagagctgcaggaagaactggaggaggctcgcagtgcagtcacaattgcacaatgt
acagctgaaaatgacattgctgtagaacaacgtaaatgtcaggaggaaatagccacagtc
caacagctcatgaaagaggaggtgacgaatgccgttggacagacaggtgaccggtatgaa
ggggagatcaagagactcaaaaagttaacagaaagacttgatgctgaaaagcagcactat
cgacgcttgtatgagcggcagctagaggattcatatataagatcaaagagtgagagcctc
ctgagtccaggtgttatctcagctgttaccaagtctttggctaagagagtgcctagcttg
agcccctcgtctgcactcagcacccctgagaagacaccttccactggctcagcagggcct
cccctgggaactggtgtagatgctgagaacctggaggacagcatgaggaaggcccaagaa
gatgctgcacttcttaggtctctggtggagcccttagaggaggaaattaatgctctcaag
gagaaaatccgtgcccaggatgcccagctgcgagcacatgaggcccaacaggcagcctct
ctccacacagctgatcttgttgctccccttctgcaggggactgacacacagctggtggtc
acacagctggatgagaagttgaaaggtatgagtaacacactagaagcagagaaggcatcc
cgtgctgatctcgagctctatactgccatccttaatacacaaaaaactgcactcaatgat
gatgtcgacagactacgcacacaactaactgaactgagacaggcttttgaagatgaacgt
cgtcaacacagagatctgaagcacacttggcaacgtgcaaatgatcagttccttgaggct
cagcgtttacacctggcagacatgagacggatgcaatctttactcactgtggatcagcaa
cgaaaattggaagaactgcagaggagtgaggaagcattagccaagagtcaagcaagttcc
atctctgacatacgcccagatctgaagccagtcggcaaacctacatcaccccagctctct
tccttgtcacctgcttccagaaaacgagtcacgtctccatctcctgatctggaggttgtt
gctgatgatgaacgaccctatgcacttgtggaccttgatgatgaccatgcctcttctact
acaccccagcttggccgtggagatcttgctgggagtgaacaaagtgatgacctgagcagt
gaggctgagacacacagtctacccccagacagtctcgcacctgagagtctggctcctgac
agccttttagcagagcgtttcagtccggataaaatgcctcagctcactcaagaccaacag
aaagctcttgcagatgtgacacctgattcagagggtgtgacacagagtgagtccatatta
acacctggtgatgatgattatgttaccatcgatctggctgcgggtggaggcagtggtaca
gggtcgactggttcaagaagggtagtcagtgaagtagaatggaatttactcaatgaagag
atccggcgtgccaggtcacgcattgggcgatcttgtcaactctgttccaactatcaaacg
cagctgcagaagattcaaagtgagcagcgagagacagagaaacagaaggtagatttagaa
aaggctctagatcgataccgagaagacctggaccgggaagcccgctatcgccatgtgatg
gaagacaagtggcgcactatggcagaggattatgaaaagaaggttgctggtgtagctagt
gtggtggaggctgcaacggggaagcacaatgaagttgtggccaaattccgagctacagtg
acataccttcatgaccagctaagagtcctcacagagcgaagagaggcagcacaacaggag
ctaaccagattacagaaagagaatgatgatctggttggtaagcacagtcagcactcacag
caattgcagaatgagatcatcaatcttcctgataatatggaggaaatgcagctgcttctc
ctccgttatcgggaggatattattgctgcaaaggtctccaaagagcaccttgaagagaca
ctcaaatcagagatactcttcctaaaggatcaagtgctggcagaacaacatgagaaaaac
actatagaagatcgtctctcctcagagatagaccagctgagagagaaggttgctgtcttg
gaaagtgtagagagccagatgaaggctgaacgaagaagcagggcagagagtgatgcacaa
cttaaagagctggagaacagacagtctgaggcacagctcaagagccagcaaatcatatct
gctcttaaaacgcaggtagctgagcagacacaggcaagggcaagactggaagctgaagta
gttgaacttcgaggaagagtatctgctctccagcatgatcttgacacttctgaagctgtc
caaagagattttgtgcggctctcacagtccctccaggttcagctagagaaaatacgacag
tcagaaaaagaggtgcgctggcaacacgaagaggatcaggaggaatgcaacagttgcaag
cagcgattttctgcaatgggacgaagaaagcatcattgtcgtcattgtgggaagatcttc
tgcaatgagtgtgtgagtaagactgttcccagcgggccacacagacgtccttccagagtg
tgtgatgtatgccacacactcctcgtgcaagatgccacgccatacttcagttcagaaccg
ccacattcacctgactga
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