Penaeus vannamei (Pacific white shrimp): 113824646
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Entry
113824646 CDS
T06111
Symbol
SA1
Name
(RefSeq) cohesin subunit SA-2
KO
K06671
cohesin complex subunit SA-1/2
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pvm03036
]
113824646 (SA1)
Chromosome and associated proteins [BR:
pvm03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
113824646 (SA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HEAT_SCC3-SA
STAG
SCD
CDC27
Motif
Other DBs
NCBI-GeneID:
113824646
NCBI-ProteinID:
XP_070000342
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Position
31:complement(15513839..15579635)
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AA seq
1343 aa
AA seq
DB search
MLRRGGKRIRMDEPPPEYDAPPMTPMTPASELQEPYTPYTPYTPAAETPLHHPDYQMGYN
QSYDQPVHHQPPQTPQQQHIYGHQEYDQQQQQQQQQQQQQAYQQQQQQNVYQNMYEQQPP
QTPTPHYQQQHTPQAHVEPEPEPEPEMEPEEQDEDMDHDAESDIDAHEEEDQQPAQNYEP
IPRLTISIRGRGRGRGRGRIATIKKIGDQIVGEPPRKRGRPGRKPITEVMAEDEQSLYFI
VRNGRTALAQVVDDWIDSYKDNRDGALLQLMQFFINAAGCKGKITPHMQATMEHAEIIRR
MTEEFEEESGEYPLIQSGQQWKKFRSNFCEFVQLLVKQCQYSIIYDQYLMDNVISLLTGL
SDSQVRAFRHTATLAAMKLMTALVDVALTVSVNLDNTQRQYESERQKSREKRASDRLESL
MSKRQELEENMDEIKNMLTYMFKSVFVHRYRDTLPEIRSICMAEIGLWMKKFHQNFLDDS
YLKYIGWTLHDKVGDVRLKCLQALQPLYASEELKGKLELFTSKFKDRIVAMTLDKEYDVA
VQAVKLVISILKYHRDILTDKDCEHVYELVYSSHRAVAQAAGEFLNERLFIPDDEAVAAL
RTKRGKKRRPNTPLIRDLVQFFIESELHEHGAYLVDSLIESNDMMKDWECMTDLLLEEPG
PMEEPLDDRQETSLIEIMVCCIKQGATGEPPVGRGPTRKQILSAKEVKQVNDDRAKLTEH
LIPTLPQLLHKYLADPEKVANLLLIPQYFDLEIYTTSRQEKNLDLLLKLIQEVADKHSDT
DVLETAAKTLEILCNDDYTIYSRCDIARSSLLDMVVNKYKEANDEYLTLIDGEEEPDEDE
TFALVSSVKKVSIFYSCHNMGPCNIWDSLYKNISYAIDGSKSLPEEAIKYCISSCFFGVM
WELHQIEMDKRTITHDAVEALRTRLHLFLDACKHLLANSNNQVFREEAYVTLCDLLIVFS
RQLLANAHLAPLVYVPDRGLQHLLNHFIQTYVFIDDEDEEQDEHVKIEELHKRRNFLATF
CKLIVYNVLPTKVAADVFKHYVRYYDDYGDIIKATLGKAREINKVNSARTMALALTMIFR
ELHKDNVRINRQGVDFISLKELAKRFALSFGLDAVKNREAITALHREGILFAVNPLENPA
DPTGPPPNLAFLEILTEFTNKLLKQDKRVVLAYLDRRIAAGMPSSRGEDWQPLLMYRNSL
VHGEGDQPPQTSKRAYTRKRKHVDDDDDDDEDDDAGFQPPIEEPRETGRPKRRRRLEQTH
PDIIGRTIRHKWYIDGEGVYCTGTVLGISAPGTIPEESDDGQFINGTCYDIQYDDEDFVR
HLILEGDWQRGDIAVLGRADNVP
NT seq
4032 nt
NT seq
+upstream
nt +downstream
nt
atgttgcgtcggggtgggaagcgcatccgtatggatgagccaccaccagagtatgatgca
ccacccatgaccccaatgacaccagcatcagaactgcaggaaccttatacaccttatacc
ccttacactccagctgctgagactcctcttcaccaccctgattaccagatgggctacaac
cagtcctatgatcagccagtccatcaccaacccccacagacacctcagcagcagcatatt
tatggtcaccaggaatacgatcagcaacagcagcagcagcagcaacaacaacaacaacaa
gcctaccagcaacagcagcagcaaaatgtttatcaaaacatgtatgaacaacagcccccc
cagactccaacacctcattatcagcagcaacatactcctcaggcacatgtggagccggag
ccagagccagagccagaaatggagcctgaagagcaggatgaggacatggaccatgatgca
gagtctgacatagatgcccatgaagaagaggaccagcagccagcccagaattatgagcca
atccccaggttgacaatttccatccgagggagaggcagaggtcgtggaagaggcagaatt
gctaccattaaaaagattggagatcagattgttggagagcctccacgcaagagaggaagg
cctggcagaaagcctattactgaggtcatggctgaagatgagcagtcactgtatttcatt
gtgagaaatgggagaacagccttagcgcaagtggttgatgattggatagactcttacaag
gataaccgtgatggagcactactacagcttatgcagttcttcatcaatgctgctggttgc
aagggcaagattacaccacatatgcaagctaccatggaacatgctgagatcatcaggcga
atgacagaggaatttgaggaggaaagcggtgagtatccattaatccagagcggtcagcag
tggaagaaatttcgcagtaacttctgcgagtttgtgcagcttttggtgaaacagtgtcag
tactccattatctatgaccagtaccttatggacaacgtcatctctctcctcaccggcctc
tctgactctcaagtcagagctttccgacacacagcaacactcgcagccatgaaactgatg
acagcattggtggatgttgctctgacggtgtctgtcaaccttgataacacccagcgccag
tatgagtcagagagacagaagtctcgtgagaaacgtgcatctgaccgtcttgagtcattg
atgtcaaaaagacaagaactggaagagaacatggatgaaatcaagaatatgctcacgtac
atgttcaagtctgtctttgtacatagatacagggacacgctgcctgaaatccgctctatc
tgtatggcagaaattggcttgtggatgaagaaattccaccaaaactttttggatgactcg
tacctgaaatacattggttggacactccatgataaagtaggtgatgtgcgactgaaatgc
ttacaagccctccagcccttgtacgccagtgaagaactcaaagggaagctggaactcttc
actagcaagttcaaagaccgtattgtggctatgactctggacaaggaatatgatgttgct
gttcaggctgtgaaactggtgatctctattctcaaatatcatagggatattttgacagac
aaagactgtgaacatgtgtatgaacttgtgtactcttcccatcgtgctgttgcacaggca
gctggagagttcttgaatgaacgtcttttcattcctgatgatgaggctgttgctgctctg
agaacaaagcgtggcaagaagcgtagacctaacactcccctcatcagagatttagtccaa
ttcttcattgagtctgagttacatgagcatggagcatatttggtggattctcttattgaa
agcaatgacatgatgaaggactgggagtgcatgacagatctcctcctggaagaacctggg
cccatggaagaacctttggatgatcgtcaagagaccagccttatagaaatcatggtgtgc
tgcatcaagcaaggagccacaggggaacctcctgttggtagaggcccaacaagaaaacaa
atactatcagccaaagaggtaaaacaagtgaatgatgacagggcaaagttaacagaacac
ttgatcccaacattaccacaacttctgcataaatatttggctgatccagagaaggtagcc
aatctcctcctcatccctcagtactttgacttggaaatatacactacaagcagacaagag
aagaatttagacttgctcctgaagcttattcaagaggtggctgataagcatagtgacact
gatgtattggaaacagcagcaaagaccttagagatcctgtgtaatgatgactacactatc
tactcccggtgtgacattgcaaggtcatctctcttagatatggtggtcaacaagtacaaa
gaagctaatgatgaatacctcacccttattgatggtgaggaagaacctgatgaagatgaa
acctttgccttggtatcatctgtgaagaaagtgtccatcttttattcctgccacaacatg
gggccatgcaatatttgggattcactgtacaaaaatattagttatgctattgatggcagt
aaatctctgccagaggaggcaataaagtactgcatttcttcatgcttctttggtgtaatg
tgggagttgcaccaaatagaaatggataagcggactatcacccatgatgcagttgaagct
ctacgtactcgtctgcatctgttcctagatgcatgcaaacacctattagctaattcaaac
aaccaagtcttcagagaggaggcctatgtgactttgtgtgatcttctgattgtgttcagc
cgtcagttgttggccaatgcacatctggctcctttggtgtatgtgccagacaggggcctg
cagcatctcctcaaccacttcattcaaacctatgtattcattgatgatgaggatgaagaa
caagatgaacacgtcaaaattgaagaactgcacaaacgacgtaactttcttgccacattt
tgcaagttaattgtgtacaatgttctgccaacaaaggttgctgctgatgtcttcaaacat
tatgtcagatattatgatgattatggtgatatcatcaaggccaccttaggcaaagcccgt
gagatcaataaggtgaactctgctagaaccatggcattggcccttacaatgatcttccga
gaacttcacaaagataatgtgagaattaacaggcagggtgtagacttcattagtctcaag
gaactggccaaacgatttgccttgtcctttggtcttgatgctgtgaaaaatcgtgaggca
attactgcgcttcaccgggaaggcattctgtttgctgttaaccctcttgaaaaccctgct
gatcctacaggacctcctccaaaccttgctttcctggagatattaactgaattcacaaat
aagctcctgaaacaggacaagagagttgtgctcgcataccttgatcgtcgcatagccgct
ggtatgccaagctcaagaggggaggactggcaaccattacttatgtatcgtaattcactg
gtgcatggagagggtgatcagcctcctcagacatctaaacgtgcctacacccgcaagcgc
aaacatgttgatgacgatgacgatgacgatgaggatgatgacgctggattccagccaccc
atcgaggaacctcgcgagacgggacgccccaagagacgaagaaggctggaacagacacac
ccagatattattggccgtaccatccgtcacaaatggtacatcgatggagaaggggtgtac
tgtactggtacagttctgggtatttctgccccagggacaatacccgaagagtcagatgat
ggccagttcataaatggcacatgttatgatattcaatatgatgatgaggactttgtgagg
cacttaattcttgagggagattggcagagaggagacattgctgttttgggccgtgcagat
aatgtgccataa
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