Penaeus vannamei (Pacific white shrimp): 113824896
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Entry
113824896 CDS
T06111
Name
(RefSeq) WD repeat-containing protein 36
KO
K14554
U3 small nucleolar RNA-associated protein 21
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Pathway
pvm03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
113824896
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pvm03009
]
113824896
Ribosome biogenesis [BR:
pvm03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
113824896
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Utp21
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
WD40
Beta-prop_EML_2
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_EML
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
NBCH_WD40
Beta-prop_HPS5
WD40_MABP1-WDR62_1st
Beta-prop_VPS8
Beta-prop_DCAF4
Beta-prop_RIG_2nd
Beta-prop_SPT8
Beta-prop_IFT140_1st
WD40_RFWD3
Beta-prop_SCAP
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_Vps41
BCAS3_WD40
Motif
Other DBs
NCBI-GeneID:
113824896
NCBI-ProteinID:
XP_027233460
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Position
23:complement(39067303..39070235)
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AA seq
896 aa
AA seq
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MSEGSRIFTPYRALGLVSNGIPLAIRYIERRKENLIVTAVGNSFHTYSGNKLVLLTVSNP
HPSPIVALSADAYHIYTSCDKVIYAWRRGTEIKHKYVGHQADVHLMLPFGPLLISVDRLN
NLRVWDIKDESLHLDMEFQSKSFEISAIVHPATYLNKILLGSKQGQLQLWNLKTCKLLYT
FAGWDSEVVTMEQAPAQDVIGIGLANGRIILHNLKFDETVVEFKQDWGRVTGISFRTDGF
PVMITGSEMGHIAQWDLQERKLASQIRNAHDSAVAGIACFPNEPLMVTNSRDNTVKIWIF
DMLDRGGRLLKFRDGHSAPPLSIRFHGSFGGKIITAGEDSSMRIFHKINNVLSSSLGQAS
YNRKASKRSKASSEALKMPPITKFTSETTREKSWDSLAAVHRGTPIVTTWSVDKQKMGEH
KLMHERFKDKTIRRVTGTCVELSICGNFVIIGYDSGHLDKYNIQSGIYRGTFGTPIAHED
GVRDVVADGLNKFVVSGGENGELKWWKLSTCEEVHTLALEECITRMVLQRDSGLLAIAME
DWSIHIVDVDTQTVVRRLYGHRNQVSDISFSHDSRWLISSSLDKTVRTWDIPSSACVDCF
SLPIPATSLAMSPVGDFLATIHADKLGVYLWSNQGCYHHLSLRPLPQDFEASIVGLPSTA
ADASHLPPKEGEELAELPKEDEIDDGEEYKSPEQISEELVTLALLPTSRWLNLLNLDVIK
KKNKPTEVKIPKAAPFFLPTVPGLEFKFASEEKTDSDKTKVKVARSFEVLTDFGKKLKAG
EFHESLRMLIEMGPSGIEVEIRSLDPDIGGSEDLLLKFLEMIKFALDRNMYFEAVQGYLS
LFLKLHAEYVMSNGNVRETCETLAGVQGKAWNSVCEEIDQTLALVSYFKNAALINF
NT seq
2691 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaaggaagtagaatcttcacgccctacagagccctgggcttggtgagcaatgga
attcctttggcgattcgttatattgagagaagaaaggaaaatctgatcgtgacggccgtg
gggaattccttccatacgtacagcggtaacaagctcgtacttttgactgtaagtaaccct
cacccgagccccatagtagctctcagtgccgatgcctaccacatctacacgtcttgtgac
aaggtgatatatgcctggcgtcgtggcacggagatcaaacataagtatgttggccaccaa
gctgatgttcatctcatgctgccgttcggtcccctcttgatatcggttgacaggctgaat
aacttgcgtgtttgggatatcaaagatgagtcactccacctggatatggaatttcagagc
aagtcctttgagatttcggcgatagttcacccagcaacgtacctcaataagatcctgtta
ggcagtaagcaaggtcagttgcagttgtggaacctgaagacgtgcaagctcctgtacaca
tttgcaggatgggattcagaagtggttacgatggagcaggctccagctcaagatgtgata
ggcattgggttggccaatggcagaattattctacataatttaaaatttgatgagactgtt
gtggaatttaagcaagactggggcagggtgacaggaattagcttccgaacagatggattt
cctgtgatgataacaggaagtgaaatggggcacattgcacagtgggacttacaagagaga
aaactggcctcacagatacgtaatgctcatgacagtgcagttgctggcattgcatgcttt
ccaaatgagcccttgatggtcacaaattcaagggataatactgtcaagatatggatattt
gatatgctggatagaggaggacgattactcaagtttagggatggtcactcagcaccacct
ctttcaatcagattccatggaagttttggaggtaaaattattactgctggtgaagattcc
tccatgagaattttccacaagatcaataatgttttaagtagtagtttgggacaggcttcc
tacaatcgcaaagcatcaaagaggagtaaggcatcatcagaagccttgaaaatgccccca
attactaaatttacatcagaaacaacaagagaaaagagttgggacagtcttgcagcagtt
caccgtggcacaccaattgttacaacatggtcagtagacaaacagaaaatgggagagcac
aagttgatgcatgaacgctttaaggacaagaccatacgtcgtgtaactgggacatgtgtg
gaacttagtatttgtgggaattttgtaataattggctatgattctggtcatttagataaa
tataatatacagtctggaatatacagaggaacctttggtacacctattgctcatgaagat
ggggttagagatgttgtggcagatgggctaaataagtttgtggtatctggaggtgaaaat
ggagagctaaagtggtggaagttaagtacgtgtgaagaagtccatacactagcattagaa
gaatgcataacaagaatggtgttgcagcgagattctggactcttagcaattgccatggaa
gactggagcatacacattgttgatgtagatacacagactgtagttcgtaggttatatgga
cacaggaatcaagtgtcagatatttcattcagtcatgattcaagatggttgattagctca
tcacttgataagactgtgaggacatgggacattccatcaagtgcttgtgtggattgcttt
tcactgccaattccagcaacttctctggccatgtctccagttggtgatttcttagctacc
atacatgcagataagctgggtgtttatctttggtctaaccagggatgttatcatcacttg
tctcttcgtccactgccgcaagactttgaggctagtattgtgggcttaccatcaacagct
gcagatgcatctcacttacctcctaaagaaggtgaagagttagcagaactgcccaaagaa
gatgagatcgatgatggtgaagaatataagagtcctgaacaaatatctgaagaacttgtg
acactggcattactccctacatcaaggtggttgaatttgttaaatttggatgttatcaag
aagaaaaataagccaacagaagtgaaaattccaaaggcggcacctttctttttgccaact
gttccaggacttgaattcaaatttgcatcagaagaaaagacagacagtgataaaacaaag
gtgaaagttgcaagatcatttgaagtgttaacagactttggaaaaaaattgaaagcaggg
gagtttcatgaatccctgagaatgttgatagaaatgggaccctctggaattgaggtagaa
attcgcagccttgaccctgacattggtggatcagaagatctcctcctcaagtttttggag
atgatcaagtttgcattggatagaaatatgtactttgaagctgtccagggatatttgagt
ttattcttgaaactccatgcagaatatgttatgagtaatggaaatgtacgcgagacttgt
gaaacattagcgggcgtgcaaggaaaagcttggaatagtgtgtgtgaggaaattgaccaa
actctagctcttgtatcatatttcaagaatgctgctctgattaacttctag
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