KEGG   Penaeus vannamei (Pacific white shrimp): 113824896
Entry
113824896         CDS       T06111                                 
Name
(RefSeq) WD repeat-containing protein 36
  KO
K14554  U3 small nucleolar RNA-associated protein 21
Organism
pvm  Penaeus vannamei (Pacific white shrimp)
Pathway
pvm03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:pvm00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    113824896
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pvm03009]
    113824896
Ribosome biogenesis [BR:pvm03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    113824896
SSDB
Motif
Pfam: Utp21 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz WD40 Beta-prop_EML_2 WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd EIF3I WD40_MABP1-WDR62_2nd Beta-prop_EML ANAPC4_WD40 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_C Beta-prop_WDR75_1st NBCH_WD40 Beta-prop_HPS5 WD40_MABP1-WDR62_1st Beta-prop_VPS8 Beta-prop_DCAF4 Beta-prop_RIG_2nd Beta-prop_SPT8 Beta-prop_IFT140_1st WD40_RFWD3 Beta-prop_SCAP Beta-prop_IFT122_1st WDR90_beta-prop_4th Beta-prop_Vps41 BCAS3_WD40
Other DBs
NCBI-GeneID: 113824896
NCBI-ProteinID: XP_027233460
LinkDB
Position
23:complement(39067303..39070235)
AA seq 896 aa
MSEGSRIFTPYRALGLVSNGIPLAIRYIERRKENLIVTAVGNSFHTYSGNKLVLLTVSNP
HPSPIVALSADAYHIYTSCDKVIYAWRRGTEIKHKYVGHQADVHLMLPFGPLLISVDRLN
NLRVWDIKDESLHLDMEFQSKSFEISAIVHPATYLNKILLGSKQGQLQLWNLKTCKLLYT
FAGWDSEVVTMEQAPAQDVIGIGLANGRIILHNLKFDETVVEFKQDWGRVTGISFRTDGF
PVMITGSEMGHIAQWDLQERKLASQIRNAHDSAVAGIACFPNEPLMVTNSRDNTVKIWIF
DMLDRGGRLLKFRDGHSAPPLSIRFHGSFGGKIITAGEDSSMRIFHKINNVLSSSLGQAS
YNRKASKRSKASSEALKMPPITKFTSETTREKSWDSLAAVHRGTPIVTTWSVDKQKMGEH
KLMHERFKDKTIRRVTGTCVELSICGNFVIIGYDSGHLDKYNIQSGIYRGTFGTPIAHED
GVRDVVADGLNKFVVSGGENGELKWWKLSTCEEVHTLALEECITRMVLQRDSGLLAIAME
DWSIHIVDVDTQTVVRRLYGHRNQVSDISFSHDSRWLISSSLDKTVRTWDIPSSACVDCF
SLPIPATSLAMSPVGDFLATIHADKLGVYLWSNQGCYHHLSLRPLPQDFEASIVGLPSTA
ADASHLPPKEGEELAELPKEDEIDDGEEYKSPEQISEELVTLALLPTSRWLNLLNLDVIK
KKNKPTEVKIPKAAPFFLPTVPGLEFKFASEEKTDSDKTKVKVARSFEVLTDFGKKLKAG
EFHESLRMLIEMGPSGIEVEIRSLDPDIGGSEDLLLKFLEMIKFALDRNMYFEAVQGYLS
LFLKLHAEYVMSNGNVRETCETLAGVQGKAWNSVCEEIDQTLALVSYFKNAALINF
NT seq 2691 nt   +upstreamnt  +downstreamnt
atgtcagaaggaagtagaatcttcacgccctacagagccctgggcttggtgagcaatgga
attcctttggcgattcgttatattgagagaagaaaggaaaatctgatcgtgacggccgtg
gggaattccttccatacgtacagcggtaacaagctcgtacttttgactgtaagtaaccct
cacccgagccccatagtagctctcagtgccgatgcctaccacatctacacgtcttgtgac
aaggtgatatatgcctggcgtcgtggcacggagatcaaacataagtatgttggccaccaa
gctgatgttcatctcatgctgccgttcggtcccctcttgatatcggttgacaggctgaat
aacttgcgtgtttgggatatcaaagatgagtcactccacctggatatggaatttcagagc
aagtcctttgagatttcggcgatagttcacccagcaacgtacctcaataagatcctgtta
ggcagtaagcaaggtcagttgcagttgtggaacctgaagacgtgcaagctcctgtacaca
tttgcaggatgggattcagaagtggttacgatggagcaggctccagctcaagatgtgata
ggcattgggttggccaatggcagaattattctacataatttaaaatttgatgagactgtt
gtggaatttaagcaagactggggcagggtgacaggaattagcttccgaacagatggattt
cctgtgatgataacaggaagtgaaatggggcacattgcacagtgggacttacaagagaga
aaactggcctcacagatacgtaatgctcatgacagtgcagttgctggcattgcatgcttt
ccaaatgagcccttgatggtcacaaattcaagggataatactgtcaagatatggatattt
gatatgctggatagaggaggacgattactcaagtttagggatggtcactcagcaccacct
ctttcaatcagattccatggaagttttggaggtaaaattattactgctggtgaagattcc
tccatgagaattttccacaagatcaataatgttttaagtagtagtttgggacaggcttcc
tacaatcgcaaagcatcaaagaggagtaaggcatcatcagaagccttgaaaatgccccca
attactaaatttacatcagaaacaacaagagaaaagagttgggacagtcttgcagcagtt
caccgtggcacaccaattgttacaacatggtcagtagacaaacagaaaatgggagagcac
aagttgatgcatgaacgctttaaggacaagaccatacgtcgtgtaactgggacatgtgtg
gaacttagtatttgtgggaattttgtaataattggctatgattctggtcatttagataaa
tataatatacagtctggaatatacagaggaacctttggtacacctattgctcatgaagat
ggggttagagatgttgtggcagatgggctaaataagtttgtggtatctggaggtgaaaat
ggagagctaaagtggtggaagttaagtacgtgtgaagaagtccatacactagcattagaa
gaatgcataacaagaatggtgttgcagcgagattctggactcttagcaattgccatggaa
gactggagcatacacattgttgatgtagatacacagactgtagttcgtaggttatatgga
cacaggaatcaagtgtcagatatttcattcagtcatgattcaagatggttgattagctca
tcacttgataagactgtgaggacatgggacattccatcaagtgcttgtgtggattgcttt
tcactgccaattccagcaacttctctggccatgtctccagttggtgatttcttagctacc
atacatgcagataagctgggtgtttatctttggtctaaccagggatgttatcatcacttg
tctcttcgtccactgccgcaagactttgaggctagtattgtgggcttaccatcaacagct
gcagatgcatctcacttacctcctaaagaaggtgaagagttagcagaactgcccaaagaa
gatgagatcgatgatggtgaagaatataagagtcctgaacaaatatctgaagaacttgtg
acactggcattactccctacatcaaggtggttgaatttgttaaatttggatgttatcaag
aagaaaaataagccaacagaagtgaaaattccaaaggcggcacctttctttttgccaact
gttccaggacttgaattcaaatttgcatcagaagaaaagacagacagtgataaaacaaag
gtgaaagttgcaagatcatttgaagtgttaacagactttggaaaaaaattgaaagcaggg
gagtttcatgaatccctgagaatgttgatagaaatgggaccctctggaattgaggtagaa
attcgcagccttgaccctgacattggtggatcagaagatctcctcctcaagtttttggag
atgatcaagtttgcattggatagaaatatgtactttgaagctgtccagggatatttgagt
ttattcttgaaactccatgcagaatatgttatgagtaatggaaatgtacgcgagacttgt
gaaacattagcgggcgtgcaaggaaaagcttggaatagtgtgtgtgaggaaattgaccaa
actctagctcttgtatcatatttcaagaatgctgctctgattaacttctag

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