Penaeus vannamei (Pacific white shrimp): 113824984
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Entry
113824984 CDS
T06111
Name
(RefSeq) mitochondrial mRNA pseudouridine synthase RPUSD3
KO
K22537
mitochondrial RNA pseudouridine synthase RPUSD3 [EC:5.4.99.-]
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
pvm03029
]
113824984
Mitochondrial biogenesis [BR:
pvm03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
113824984
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Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-GeneID:
113824984
NCBI-ProteinID:
XP_027233567
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Position
6:4786979..4794308
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AA seq
398 aa
AA seq
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MFCYSTKNLYGRFSVECRWIASQHMATASKSSFKKTKPRYPTGNFGLDKKERRTLRKRLL
EGKNDTVKKHVFKKLYPWQSKKDLALHLKNSEVYNDGGLITLCKPYGIPQVGHYEAPKEE
SRTIVQTLASGGVPDNVPSINRTIPILKELYNVDHLEVVKSTERWSSGLILLSTDPNVTE
KVKKCFRSSQALQQPPLTYWAVTCGMPRPVAVAKRVPFGLEHVPNTGHMPVIKKEYAKGD
IKSGKVKLAVVEHVTKVFSKESDMSLVEVNVHITKNHFLRVWLAYSYSPILGDHLYGGRV
KTVAGKKVLVGEQNLTSYVPQTLPDDTFLRLNLPDKAVEMIPCHLHLSKIKLSRFEKNKS
DLVITAPPPDHFMWTCRQLGLMAADEEGEQDIAEESSR
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgttttgctactcaacgaaaaatctttatggaaggttctctgttgagtgtagatggatt
gcctctcaacacatggccactgcttccaaatcttcatttaagaaaacaaaacccaggtat
cctacaggcaattttggtctcgacaaaaaggaacgaagaactttgagaaagcgcttgctg
gagggtaaaaacgacactgtgaaaaagcatgtcttcaagaaactctacccatggcagagt
aaaaaggacttagctctgcatttgaaaaacagtgaagtgtataatgatggtggacttatt
accttgtgtaaaccatatggcatccctcaagtgggccattatgaggcgcccaaagaagag
agccggaccattgttcagactttggccagcgggggagtgccggacaacgtgccttcgata
aacaggaccattcctattttgaaggagctgtataatgtggatcatcttgaagtggttaaa
tcaactgagaggtggagcagtggcctaattctcctgagtaccgatcccaatgtcacagaa
aaggtcaagaagtgttttaggtcgtcgcaagccttacagcagcctccattgacctactgg
gctgtaacgtgtggaatgccaagacccgtggctgttgcgaagagggttccctttggccta
gagcatgttccgaacacagggcatatgccagtgattaagaaagagtatgctaaaggtgac
atcaaaagcgggaaagtgaaactggccgttgtagaacatgtaacaaaagtgttcagtaaa
gaatcagacatgtcccttgttgaggttaatgttcatatcaccaagaaccatttcctgaga
gtatggctagcgtatagttacagcccaatcttaggtgaccatctttatgggggtagagta
aaaacagttgcaggcaaaaaggtgcttgttggtgaacagaatctcacatcgtatgtccca
cagactttaccagatgatactttcttaaggttgaatctgcccgacaaagcagtagagatg
ataccttgccacttgcacctctcaaaaataaaactcagccgctttgaaaagaacaagtcc
gacctggtcattaccgctcctccacctgaccattttatgtggacgtgtagacaacttgga
ctcatggctgcagatgaggaaggtgaacaggacattgcagaggagagttcacgatag
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