Penaeus vannamei (Pacific white shrimp): 113825094
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Entry
113825094 CDS
T06111
Symbol
Usp39
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 39
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Pathway
pvm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113825094 (Usp39)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pvm03041
]
113825094 (Usp39)
Spliceosome [BR:
pvm03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
113825094 (Usp39)
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
113825094
NCBI-ProteinID:
XP_027233682
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All DBs
Position
7:33579041..33600186
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AA seq
503 aa
AA seq
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MMSTTEEKFIPPVNQAVKRELEDDVDDKRAVTKKSRQCPYLDTINRHMLDFDFEKLCSVS
LSRINVYACLVCGKYFQGRGPNTHAYTHSVSDGHHVYLNLQTLRFYCLPDNYEIIDSSLN
DIIYVVNPTFTKEYIAKKVNQSKMSRAYDGTLYLPGIVGLNNIKANDYCNVVLQALSNIT
PLRNYFLDPNNYSHIHHAPGTKGLAMFPLITRFGELVRKLWNPRNFKAHVSPHEMLQAVV
SCSRKKFQFTVQGDAIQILSWILNSMHLGLKTPKRKSTIIYRCFRGTMNIYSQKILPVEI
DEKERNRLLKCEEYQEKMEESPFLYLTCDLPQPPLFKDEKKENIIPQVSLYVLLSKFDGK
TGKEYQTYKENILKKFQLTGLPPYLILYNKRFTKNTFYIEKNPTIVNFPVKNIDLTEYLT
EEVKQKHPEPIYDLVANIVHDGEPEAGTYRCHILHKGTGKWYELQDLHVKEIEPQMLTLT
ESYIQIYEMQNCVVKTHDKDAKA
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcaaccacagaagagaaattcattcctcctgtcaaccaggcggtaaagagggag
ttagaagatgatgttgatgataagagagcagttacaaagaagtcacgccagtgcccttac
ttggacaccattaatcgtcatatgttagattttgactttgagaaattgtgcagtgtgtca
ctctcaagaatcaatgtgtatgcctgtctggtttgtgggaaatactttcaaggacgtgga
cccaatacacacgcatatacccacagtgtgtcagatggtcatcatgtgtacctcaatttg
cagactctacgattttactgcttacccgacaactatgagattattgattcatctcttaat
gacattatatatgttgtgaatccaaccttcacaaaggaatacattgcaaagaaagtaaac
cagagtaagatgagcagagcatatgatggtactctttatcttcctggcattgtgggcttg
aacaatatcaaggctaatgattattgtaatgtagtattacaggctttgtcaaatatcaca
cctctaagaaactacttcctagatcccaataactacagccacattcaccatgcaccaggt
actaagggactggcaatgtttcctctcattacaagatttggtgaattggttaggaagtta
tggaacccaaggaatttcaaggctcatgtttctcctcatgaaatgttacaagcagtagta
tcatgcagtagaaagaagttccagttcacagtacaaggtgatgctattcagattctatcc
tggatattgaactccatgcaccttggtctgaaaacaccaaaacgtaaaagcacaatcatt
taccgctgttttagagggaccatgaacatctactcacagaagatccttcctgttgagata
gatgagaaagagagaaaccggctcttgaagtgtgaggagtaccaggaaaagatggaggaa
agccctttcctttaccttacatgtgatttgcctcagcctccattatttaaagatgaaaag
aaggagaatatcataccacaggtgagcttgtatgtcctcctgagtaagtttgatggcaaa
actggaaaggaatatcagacctacaaagaaaacatcttgaagaaattccagctgactggc
ttgcccccatacctcatcctgtacaataagcgttttacaaagaacactttttacattgag
aagaatcctacaattgtcaatttcccagtgaagaatattgatttgacagagtatttgaca
gaggaggtaaagcaaaaacacccagaacccatttatgatttagtggcaaatattgtgcat
gatggtgagccagaggcaggaacctacagatgtcacatactccacaagggcaccggaaaa
tggtatgaactgcaagatcttcacgttaaagaaattgagcctcagatgttaactttgact
gaatcatatattcagatctatgagatgcaaaattgtgttgtaaaaacacacgacaaagat
gcaaaggcatga
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