KEGG   Penaeus vannamei (Pacific white shrimp): 113825152
Entry
113825152         CDS       T06111                                 
Symbol
Syn1
Name
(RefSeq) beta-1-syntrophin isoform X1
  KO
K24064  beta-syntrophin
Organism
pvm  Penaeus vannamei (Pacific white shrimp)
Pathway
pvm04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:pvm00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    113825152 (Syn1)
SSDB
Motif
Pfam: Syntrophin_4th PDZ PH_17 PH PDZ_6 PDZ_2 AI2M-like_HNH
Other DBs
NCBI-GeneID: 113825152
NCBI-ProteinID: XP_027233750
LinkDB
Position
38:complement(4611232..4633684)
AA seq 491 aa
MGEKVGNAEVLVGGTWHQARLTLEGDLLFVTLTDLDDLNLQGSDGEGGPSDVPEPIASQK
RVVQICKSDNNGLGISIKGGRENKMPILISKIFKGMAADLTENLYVGDAILSVNGEDLKE
ATHDEAVRALKRAGKVVTLEVVPSFYITVKYLREVTPYFRKASVMADIGWELQSGFLGAE
NGFLNSDEDRSSPVMTNGPDTRSLPLLFCHLTRNYKCDEQYSLELHSPDRLHSLMIKCPS
EADITGWYNALHSTLDRLMQSALQHANKMLGDVLDKATIHHIGWLKLKVDQGKEEWEPQF
CAVTDHDMILFQEVPWTKEAWANPLVFYPLLATRIVNSTHKGSLGGSEPITMTMRCGTQE
GVCTSVFRHDTQRDLATWVKVLVQGAHNAVQRQKEVACYCEWRGVEAKLVLHHEDGFTLL
STHDAAGGRGRVLWTQPFHKLVMSSDDGARLIWLRFDGDMEVELDLKTNPKPFVFILHTF
LSAKVHQQSLS
NT seq 1476 nt   +upstreamnt  +downstreamnt
atgggagagaaggtgggtaacgcggaggtgttggtggggggtacatggcaccaggctcgc
ctcacactcgagggcgacctgctctttgtcacactcacggacctcgacgacctcaacctg
caaggttcagatggggaaggaggccccagtgacgtccctgagccaatagccagccagaag
cgggttgttcaaatatgcaagtcagacaacaatggcctcggaatatctattaagggtgga
cgtgagaacaagatgcccatcctcatttccaaaatctttaagggaatggctgcagacttg
accgagaacctttacgtgggtgatgccatcctatccgtcaatggtgaagacctcaaagaa
gccacacacgatgaggccgtccgtgccctcaaacgagcaggcaaagttgttacattagaa
gttgtgccgtccttctacattacagttaaatacctgcgtgaggtgacaccatacttccgc
aaggcctctgtcatggctgatattggctgggaactacagtcaggattcctaggtgcagaa
aatgggttcctgaacagtgacgaggaccgcagctctcctgtcatgaccaatggacctgac
acacgctcgctgccgttgctcttctgtcacttgacccgaaattacaaatgtgatgagcag
tacagcttagaactgcactcgcctgaccgcctgcacagcctcatgataaagtgtccatca
gaagcagacattactgggtggtacaatgccctccactccactctggatcgcctcatgcag
tcggcccttcagcacgccaacaagatgctaggcgatgtccttgataaagccaccatacac
cacataggctggctcaagctaaaggtggaccagggcaaagaggagtgggaacctcagttc
tgtgctgtcacagaccacgatatgatcctctttcaggaagttccctggacaaaagaagct
tgggcaaacccccttgttttttacccgcttctcgcaactagaattgtcaactcgacacat
aaaggatctctgggaggcagtgagcccatcacgatgactatgcggtgtggcacccaggag
ggcgtgtgcacaagtgtctttcggcatgatacgcagcgcgacctggccacttgggttaag
gtgctagtccagggagcacacaatgctgtgcaaagacagaaggaagttgcttgctattgt
gagtggaggggagtcgaagccaagctagtcctacatcatgaggacggcttcacgctgctc
tcaacccatgatgcagcaggtgggcgaggacgtgttctatggacgcagcccttccacaaa
ctagtcatgagctcagacgatggagcgagactcatctggttgcgctttgacggggacatg
gaagttgagctggacctaaaaaccaaccccaagccattcgtgttcatcctgcacaccttc
ctgtcagccaaggttcaccaacagtccctctcctga

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