Penaeus vannamei (Pacific white shrimp): 113825343
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Entry
113825343 CDS
T06111
Symbol
Elp1
Name
(RefSeq) putative elongator complex protein 1
KO
K11373
elongator complex protein 1
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pvm03016
]
113825343 (Elp1)
Transfer RNA biogenesis [BR:
pvm03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
113825343 (Elp1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_ELP1_1st
A-sol_ELP1
HB_ELP1
Beta-prop_ELP1_2nd
TPR_ELP1
ANAPC4_WD40
TPR_GEMI5
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
113825343
NCBI-ProteinID:
XP_069992082
LinkDB
All DBs
Position
21:complement(15881795..15916486)
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AA seq
1355 aa
AA seq
DB search
MRNLRLSDHTSEALHNNSEGLLCVNPITSAIYHINKDGLGIIKGDSEGSPQLTWSSHDIQ
TSKIVQADFVTAINALCIVTNEGDVFTVNTENQEVEVVGSVSAGLDAACWSPDQELLVLV
TRESSVVMMTAEFDPLIEFPLNHDGFGESEFINIGWGKKETQFHGQQGKAAAKSAKSTVV
PVSELDDLIPRISWRGDGEMFAVSYVTNESKCRRIRVINNEGVLQYTSEETSGLEQALSW
KPSGSLIASSQRFPNKHDIVFFEKNGLRHGEFSLPFKPSEVLVKEVLWNQDSTVLIVWLE
KLENNAVTSSIIQLWTTGNYHWYLKQELRYNEKICHICWDYETPLILHLLTATQYYCYRW
SFHTDVSQGLGVSDLAQVGVIDGTKLKMTPFRQAVVPPPMSAYVITFQECIQAVMFAPSV
VRKCEASPDSSLCVEDSGFLEAFDPPGCNSNNLCVVHGSGILTFLTQAHASENLDDQGCG
VQVTGAGGNGFTVKVKVHRVFAQHQIEWESQPKPSESTLLYNWLWVSKSTMIAFYKEEIS
FLAVIDLQSLGSEAGRTVVRTVLPLEDKVLSVASAPDGSMVVLQLASGALVKADLGLQKV
EPYEVDGHEVQFPTVCQKLAVCPINEGTDIAVLGLTRRSRLYWGDKQLLPNCTSFHIHNS
HLLVTTSSHLLLIIPLMQKAFEKLLEGKIEGSWAVSTRKVERGSQLVTAVPLDMRVVLQM
PRGNLEVISPRPLAVHLIKRLLTEHNYHQAIDIMRKQRVDLNLLYDHNPEDFFKHAIHFV
QNIDNAHWLDLFIANLSEVDVTNTMYSFNYSEQRTKKSYPQSNKIDAVCTAVREAMMKVN
QEKFLLPILTSYVKMTKSQMDVALRRVQELKDTKDNKHIVSAEEGLRHLLYIADVNELFD
VALGTYDFDLVMMVAEKSQKDPKEYLPFLNELKKLEEDYMKFKINVHLRRFRKALECISH
GRDHMEECMNLIVSENLYRDALQIFANNHDMHYAVCESYASYLMSRQHYNEAGMMYMRAQ
RMEDAMNAYKMAGNWKMVLVVGAKLKLNKEEMTDLCYALVENLIDKRLYADAAWIYEDYM
KNEEEAVDLLVKASQWEDALRVAYRYGRPDLVDTNIKPGCIEQGETCLHELDRLRDTFTH
YCSRLETAREVKEKQHLDILEGKGEANLDSDLYSDTSTVTGISYTQSHTIGSRSGSSMSG
KTFRSSKNRKKLERKKYSTKEGSAYEDLGLVVALYETITTVDQMATSVTALATILVTFGM
DLKAAELQTNFSALLDLIDKNKKKIWPPDVQADEDEPLFGPHFTTNGAVNLFERNDPRHI
PFAAQRMKELEPCHRHPPPITRPKNWALHLLKQEK
NT seq
4068 nt
NT seq
+upstream
nt +downstream
nt
atgaggaacctacgactgagtgaccacacctccgaagctttgcataataattcggaggga
ttattatgcgtcaatccaatcacttcggcaatctaccacatcaacaaagatggcctagga
atcataaaaggggatagtgaagggtcccctcaattaacgtggagtagccatgatattcag
acatccaagattgttcaagcagattttgtgactgccatcaatgctttgtgcattgtaact
aatgaaggggatgtctttacagtaaatactgaaaatcaagaggttgaagttgtcggatct
gtttccgcaggcttagatgctgcctgctggagccctgaccaggaactcctcgtcctagtg
actcgggaatccagtgttgttatgatgacagcagagtttgatcctcttattgaatttcca
cttaatcatgatggttttggtgagagtgagtttataaacattggatgggggaagaaggag
acgcagtttcatggccagcaaggcaaagctgcagcaaagagcgcaaagagcacagtcgtt
cctgtatcagaactggatgacctcatacctcggatcagctggcgtggagatggggaaatg
tttgcagtcagttatgttactaacgaaagcaagtgccgcaggataagagtgataaacaat
gaaggcgttttgcaatatacaagtgaagaaacttctggccttgaacaagcactgtcctgg
aagccatcaggtagcttaattgcctcttcccagaggttcccaaacaagcacgatattgtg
ttttttgagaaaaatggtctccgacatggagaattttctctgccattcaagccatcagaa
gtgcttgtaaaggaagtcctgtggaaccaagattccactgtgttgatagtctggctagag
aagcttgaaaacaatgcagtaacatccagcattatccagctttggactacaggaaattat
cactggtatttaaagcaagagctcagatataatgagaagatctgtcacatatgttgggat
tatgagactcctctcatactacacctcctaactgctactcagtattattgctaccgctgg
tcttttcacactgatgtatctcaaggactaggtgtctcggatctggcccaggttggagtg
attgatggaaccaagttgaaaatgaccccattcaggcaggctgtagtacctccaccgatg
tctgcatatgtgatcactttccaggaatgcatccaggcagtgatgtttgccccgtcagtt
gtcaggaaatgtgaggcctcgccagacagctccctgtgtgttgaggactcgggtttcctt
gaggcatttgaccctccaggttgtaacagcaacaacttgtgcgttgttcatgggtcaggc
atccttacttttctgacgcaggctcatgctagtgaaaatctagacgatcaagggtgtggg
gtacaagttactggagcaggaggtaatgggtttactgtcaaagtaaaagttcacagagta
tttgctcaacatcagatagaatgggaatctcagcctaaacccagtgagtccactttgctc
tataattggctatgggtatccaaaagtactatgatagcattttataaagaagagattagt
tttttggctgtgattgatttacagtcattagggtcagaagcaggcagaacagttgtgaga
actgttttacctctggaggataaagttcttagtgttgcttctgctccagatggttccatg
gtagtcttacaattagcttctggagctcttgtaaaagctgatcttgggttacagaaagta
gagccgtatgaggtagatggacatgaagtgcagtttccaactgtgtgtcagaaattagca
gtatgcccaattaatgaaggaacagatattgctgttttgggtttgacgcgtagaagtcgt
ctgtattggggtgacaagcaacttcttcctaattgtacttctttccatattcataatagt
catttgcttgtaactacttccagtcacttacttcttataattcctttgatgcaaaaagct
tttgaaaaactgctggaggggaagattgagggttcctgggcagtgagcacacgtaaagta
gaaagaggttcccagttagtcactgcagtgcccctggatatgagggttgtccttcagatg
ccacgtggtaacctggaagttataagtccaagacctttagcagtccatctgataaaacgc
ctcttaactgaacacaattaccatcaggcaattgacatcatgcggaaacaacgtgtcgat
ctgaatcttttatatgatcacaatcctgaggatttcttcaagcacgccattcattttgtg
caaaatattgacaatgctcactggctggatttgtttatagcaaacttaagtgaagttgat
gtgacaaacacaatgtattcctttaattacagcgaacaacggaccaagaagtcataccct
cagagcaacaagattgatgcagtatgcacagcagtaagggaagcaatgatgaaagtaaac
caggagaagttcctcctgccaattctgacctcctatgttaaaatgaccaagagtcagatg
gacgttgctctaaggagggtccaagaactgaaagacacaaaggataacaagcatatagtt
tcagctgaagaaggactcagacatttattgtacatagctgatgttaatgaactttttgat
gttgcacttgggacatatgactttgatttagttatgatggtggcagaaaaatcacagaaa
gaccccaaggaatatctgccatttttaaatgaacttaagaaattggaagaagattatatg
aagttcaagataaatgtgcatctccgaaggttcagaaaagctcttgagtgtataagtcat
ggcagagatcatatggaagaatgtatgaatctcattgtgtcagaaaatctgtatagagat
gctttgcagatatttgcaaataaccatgatatgcactatgcagtatgtgaaagttatgct
agttacctgatgtcaagacagcattacaatgaagcaggtatgatgtatatgcgtgcacaa
aggatggaagatgccatgaatgcttataagatggcaggaaactggaagatggtattggtt
gtgggagctaaattgaaacttaacaaggaagaaatgactgatttatgttacgcattagtt
gagaacctgatagataaaagactatatgcagatgctgcttggatttatgaggattatatg
aaaaatgaggaggaagctgtagatctcctggtaaaggcaagtcagtgggaagatgcacta
agagtagcctacagatatgggcggccagatcttgttgacactaatatcaaacctggatgt
atagaacagggtgaaacttgtttgcatgaacttgatagactaagggacaccttcactcat
tattgctctcgtcttgagactgcaagagaagtgaaagaaaaacaacatcttgatattttg
gaaggaaagggagaagcaaaccttgatagtgacctatactcagatacaagcacagtaaca
ggcatctcatacacccaaagccacaccattggatcccgtagtggttcgtccatgtcaggg
aaaacctttcgatctagtaagaacagaaagaaactggagcgcaagaaatatagcaccaaa
gagggtagtgcatatgaagaccttgggttagttgttgccttatatgagaccataactaca
gtagaccaaatggcaacctcagtaactgctctggccacaatcctcgttacatttggcatg
gatctcaaggccgcagagttgcaaacaaatttctcagctttactggatctgattgataaa
aacaagaaaaaaatttggcctccggatgtgcaggctgatgaagatgaaccactgttcgga
ccccactttacaactaatggggcagtcaacttgtttgagagaaatgacccaaggcacatt
ccatttgcagcacagagaatgaaagagcttgagccatgccatcgccatcctcctcccata
acaaggcctaagaattgggctttgcatctgttgaagcaggagaaatga
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