Penaeus vannamei (Pacific white shrimp): 113825377
Help
Entry
113825377 CDS
T06111
Name
(RefSeq) cartilage oligomeric matrix protein isoform X3
KO
K04659
thrombospondin 2/3/4/5
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Pathway
pvm04145
Phagosome
pvm04512
ECM-receptor interaction
pvm04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
113825377
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
113825377
09142 Cell motility
04820 Cytoskeleton in muscle cells
113825377
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvm04131
]
113825377
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pvm04147
]
113825377
00536 Glycosaminoglycan binding proteins [BR:
pvm00536
]
113825377
Membrane trafficking [BR:
pvm04131
]
Endocytosis
Phagocytosis
Opsonins
113825377
Exosome [BR:
pvm04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
113825377
Exosomal proteins of colorectal cancer cells
113825377
Exosomal proteins of bladder cancer cells
113825377
Glycosaminoglycan binding proteins [BR:
pvm00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
113825377
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_3
TSP_C
TSP_3
cEGF
EGF_CA
EGF_MSP1_1
FXa_inhibition
CBM_14
EGF
hEGF
Motif
Other DBs
NCBI-GeneID:
113825377
NCBI-ProteinID:
XP_027233998
LinkDB
All DBs
Position
Unknown
AA seq
1165 aa
AA seq
DB search
MLSFPIILGMVAGTAVAMPTKGPSCVGEGRFPNPNTCGGFYDCIPNGSGGYEESFADCNG
FVYNATSKTCSGDMECRSRSERSVTNAYPKYSYLCEGQPDDFVCADCRTMVMCVKGQAFA
RQCISGRSCSIKATFGGAVCYPGSPAECTCQSGDSFVRDLYDPQKFFSCSATGGVPENHV
CPDGMVFDETLVQCRNQASLPACGRPGVFANLDDCSEYYSCISLQYGWLQRLFMCPNGTL
FNEVTGACEDPCKRTMVCYVEGRFPDPLDRRSYYECLIIGGLMKRARYQCPHGYVWKAND
TGDGGACVEDHEMSLHDYFTRCSIPQGMCPDETTDPCLANNGGCNANADCLTVNGAVSCT
CRAGYSGDGYTCTDVNECAVANGGCSASASCKNSVGSYQCSCLAGYTGDGFTCSDVDECL
VANGGCDANARCSNTAGSRDCACKSGFTGDGFTCSDVDECLVKNGGCDVNAVCQNTNGGR
TCTCLPGFSGNGITCTDVDECLVANGGCDANARCSNTAGSRDCACKSGFTGDGLVCTDVD
ECLVANGGCDANAQCSNTAGSRDCACKSGFTGDGLVCTDVDECLVANGGCDANARCSNTA
GSRDCACKSGFTGDGLVCTDVDECLVANGGCHAKAKCTNTAGSRTCSCLAGYTGNGQVCV
VLKCPVGFAGEGADCAPDSDLDGYPDTELSCSSKYCRKDNCINRPNSGQEDADGDKIGDA
CDADADGDGHNNNKDNCPLVANSGQSDKDNDKRGNLCDNCPDASNPSQSDIDGDGIGDKC
DDDIDNDGLLNAADNCPKVANGNQADGDGDGIGDACDNCPKHPNAGQKDKDEDLLGNACD
DDVDTDSDGVEDSVDNCPNVANGDQQDVDGDGKGDVCDADSDNDGVLDKTDNCVLIRNKN
QKDTDGDGRGDACSNDLDGDKILDSDDNCIANPSVHSTDFRHLQMVALDPQTASTPPVWV
VYDNGAEIHQTVNSDPAIAVGDHVMGDVDFEGTFFVEDTSDDDFVGFIFGYQSNAKFYVV
SWKKGPQNWFNKAERGVTLKLVNSNTGPGTKLRDALWFTGSTANQAKMLWHDGSIGWKPK
VAYRWLLHHRPDIGAMRFYLYQGTKQVMDSGNIYDGTLKGGRLGLYCFSQEEIIWSNMEY
KCANGVPQEMFNDLPANLQNQVLSS
NT seq
3498 nt
NT seq
+upstream
nt +downstream
nt
atgttgtcgtttccgataattcttgggatggttgctggtacggcagtagccatgcccaca
aaggggccctcctgtgtaggtgagggcaggttccctaacccaaatacctgcggtggcttc
tacgactgcatacctaacggcagtgggggatatgaggagtcttttgcagactgtaatggc
ttcgtctacaacgccacctctaagacgtgtagcggagacatggaatgtcgctcccgaagt
gagcggagtgtgactaatgcatatcccaagtactcttacttgtgtgaaggtcagcctgat
gacttcgtgtgcgctgactgcagaacaatggtaatgtgtgtgaaaggccaggcctttgcc
cgccagtgcatcagtgggaggtcttgtagtatcaaggcaacctttggtggtgcagtgtgc
tacccaggttcgcctgcagaatgcacctgccagagtggggactcttttgtccgcgatctg
tatgacccacagaaattctttagctgctctgccaccggaggagtccccgagaaccacgtt
tgccctgatggaatggtgtttgatgagacccttgtgcagtgtcgcaaccaagccagtctc
ccagcttgcggacggcctggtgtctttgcaaacctggatgactgctctgaatactactcg
tgcatctcgcttcagtatgggtggctgcagaggctgttcatgtgcccaaatggcacactg
ttcaacgaggtaacaggagcttgtgaagatccttgcaagcggacaatggtatgctatgtg
gaaggcaggttcccagatcccctcgaccgccgtagctactacgagtgcttgattattggt
gggctgatgaagcgtgcccgctaccagtgtccccatgggtatgtgtggaaggctaacgac
actggtgatgggggagcatgtgtggaggaccatgagatgagtcttcacgactacttcacc
cgctgtagcattccacagggcatgtgtcctgatgagactacagacccctgtctggcaaac
aatggtggttgcaatgccaatgcagattgcttaacagttaatggtgctgtgagttgcact
tgcagggcagggtactctggtgatggatatacatgtacagacgttaacgaatgtgctgta
gccaacggtggctgttctgcaagtgctagctgcaaaaactctgtcggcagttaccagtgc
agttgcttggcaggatacactggtgacggtttcacctgcagtgatgttgatgagtgctta
gttgccaatggtggctgcgacgcaaatgcccggtgcagcaatactgcaggcagccgtgac
tgcgcttgtaaatcagggttcacaggagatggctttacctgttctgacgtcgacgaatgc
cttgttaaaaatggaggctgtgatgtgaatgctgtatgtcaaaacaccaatggtggaaga
acgtgcacctgtctcccagggttctctggtaatggcatcacttgcacagatgttgacgag
tgtctggttgctaacggtggctgcgacgcaaatgcccggtgcagcaatactgcaggcagc
cgtgactgtgcttgtaaatcagggttcacaggagatggcctagtttgcacagatgtggac
gagtgtctggttgccaacggtggctgcgacgcaaatgcccagtgcagcaatactgcaggc
agccgtgactgtgcttgtaaatcagggttcacaggagatggcctagtgtgcacagatgtg
gacgagtgtctggttgctaacggtggctgcgacgcaaatgcccggtgcagcaatactgca
ggcagccgtgactgtgcttgtaaatcagggttcacaggagatggcctagtgtgcacagat
gtggacgagtgtctggtagctaatggtgggtgccatgctaaagctaagtgtaccaacact
gctggtagcagaacttgttcttgccttgctggttatactggtaatggacaagtctgcgtg
gtgctcaagtgccctgttggctttgccggtgaaggtgcagactgtgctccagactctgac
cttgatggctacccagacactgaactgagctgttcaagcaagtactgccgcaaggataac
tgcattaataggccgaactccgggcaagaggatgccgacggtgataagattggcgatgct
tgtgatgctgatgctgatggagatggacataataataataaggataactgtccactggta
gccaacagtgggcaaagcgacaaggataacgataaacgtggaaacctatgtgacaactgc
cctgatgcctcaaaccccagccaaagcgatattgatggggacggtataggcgacaaatgc
gacgatgatattgataatgatgggttgctaaatgctgcagataattgtcctaaggtagct
aatggcaaccaagctgatggggatggagatggtattggagatgcttgtgacaactgcccc
aagcaccccaatgctgggcaaaaagataaggatgaagatcttctagggaatgcatgtgat
gatgacgtggacactgacagtgatggtgtggaggacagtgtggacaactgcccaaatgtg
gccaatggtgaccagcaagatgtagatggtgatggtaaaggtgatgtatgcgatgcagac
agtgacaatgatggtgtgcttgacaagactgacaactgcgtactaatccgaaataagaac
cagaaggataccgatggggatggtcgtggtgatgcctgcagcaatgacttggatggtgac
aagatattagattctgatgacaactgcattgcaaacccttctgtgcacagcaccgacttc
agacacctgcaaatggtggcactagacccacaaacggcatctactcctccagtatgggtc
gtgtatgacaatggtgcagaaattcatcagaccgtgaactctgacccagctatagcagtg
ggtgaccatgttatgggggatgttgactttgaggggaccttctttgttgaagacacgagt
gatgatgacttcgttggctttatattcggttaccaaagcaatgccaagttctatgtcgtg
agttggaagaaaggaccgcaaaactggttcaacaaagcagagaggggtgttactctgaag
ctagtgaactccaacaccggccctggcacaaaacttagggatgcattgtggttcactggg
tctacagcaaaccaggctaaaatgctctggcatgatggcagcattggatggaaacccaaa
gttgcctaccgctggctgcttcaccaccggccagatattggagccatgaggttctacttg
taccagggcactaaacaggtcatggactctggaaacatttatgatggcaccctgaaagga
ggcagactggggctctactgcttctcccaggaagaaattatatggtccaacatggagtat
aaatgtgcaaatggtgtaccccaagaaatgtttaacgacttgcctgcaaacctacagaat
caggtcctgagctcctag
DBGET
integrated database retrieval system
