Penaeus vannamei (Pacific white shrimp): 113825472
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Entry
113825472 CDS
T06111
Symbol
Prp38
Name
(RefSeq) pre-mRNA-splicing factor 38A
KO
K12849
pre-mRNA-splicing factor 38A
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Pathway
pvm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113825472 (Prp38)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pvm03041
]
113825472 (Prp38)
Spliceosome [BR:
pvm03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
113825472 (Prp38)
Complex C
U4/U6.U5 tri-SnRNP related factors
113825472 (Prp38)
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Motif
Pfam:
PRP38
PRP38_assoc
HIND
Motif
Other DBs
NCBI-GeneID:
113825472
NCBI-ProteinID:
XP_027234110
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Position
35:2492487..2508925
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AA seq
466 aa
AA seq
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MANRTVKDAHSIHGTNPQYLVEKIIRTRIYDSRYWKEECFALTAELLVDKAMALRSIGGV
YGGNIKPTPFLCLVLKMLQIQPEKDIIIEFIKQDEFKYVRALGAFYLRIVYGSLDCYKYL
EPLLNDYRKLRLMDRSGQYQLSHMDEFIDSLLREERICDVILPRMQKRWVHEANNELEGR
VSLLDDDLDDLESESDDEEPLTPPPRPTRDMIEPSRTAPRDERHGRGHSPLRRSPGRDTR
NEREREKRHRSRSRSRDRDRGMERDRGMERDHGMERNRGADRDRGTDRDRGSDRDRGMDR
DRLMDRDRGMDRDRGMDRDRGMDRERMMDRDRGMDRDRGMDRDRGMDRDRQMERERKRHR
SRSRERRHRSRSRSPGHHTHHRERMRGEKDRDHRHGDRDKDRGDRDHGRERNRDRDRDRD
RSDRKEKHHRSGRSKRDNVSTMSREDLEIAEANALRAQLGLPPLRP
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atggccaaccgaaccgtcaaggatgcccactccatccatggcacaaatccgcaatattta
gtggagaaaattatccgaactcgcatatatgattcgaggtactggaaggaggaatgtttc
gccttgacagcggaactcttagtagacaaagcaatggccttgaggagcattggtggagtg
tatggtggaaatattaagcccactcccttcctgtgtctcgtgttgaagatgctccagatt
cagccagaaaaggatattataattgaatttattaagcaagatgaattcaaatacgttcgt
gcgctaggagctttttacttacggatagtatatgggtctttagattgctacaagtacttg
gagcctttgcttaatgactacagaaaacttcgtttgatggaccgctctggccagtatcag
ctctctcacatggatgaattcattgacagtttactgagagaagaacgtatttgtgatgta
attttacccagaatgcagaaaagatgggtgcatgaagccaacaatgaactggaaggaaga
gtttctttgttagatgatgacttggatgacttagaaagtgagagcgacgatgaagagcct
ctaacacccccacctcgtcctacaagagacatgattgaaccttcccggactgctcccaga
gatgagaggcatgggagaggtcactctcctctacgacggtctcctggcagagacacaaga
aatgaacgggaaagggaaaaaagacaccgcagtaggagccgttcacgtgacagagaccgt
ggcatggagcgtgataggggaatggaaagggatcatgggatggaaagaaatagaggagct
gacagggacagaggcacagatagagacaggggttcagatagagatagagggatggataga
gacagattaatggacagagatagaggcatggacagggatcgagggatggacagagatcgg
ggcatggatagggaacggatgatggatcgagatagaggtatggacagagacagaggtatg
gatcgggatagaggcatggatagagatagacaaatggaaagagagaggaaacgccatcgc
agtcgttcaagagaaagacgccaccgatcacgatcaagatctccaggtcaccatacacac
caccgtgagcgtatgcgaggagagaaggatagagaccaccgtcatggagatcgtgacaag
gatagaggagacagagatcatggaagagagcgaaatcgtgaccgtgacagagatcgcgat
cgcagcgaccgcaaagagaagcaccaccgcagtggacgcagtaagagggacaatgtctct
acaatgagtcgagaagacctagaaattgcagaagccaatgctctaagagcacagttagga
ttgccgccactgcgtccatag
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