Penaeus vannamei (Pacific white shrimp): 113825807
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Entry
113825807 CDS
T06111
Name
(RefSeq) E3 ubiquitin-protein ligase TRAIP
KO
K11985
TRAF-interacting protein [EC:
2.3.2.27
]
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvm04121
]
113825807
Enzymes [BR:
pvm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113825807
Ubiquitin system [BR:
pvm04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
113825807
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
CALCOCO1
zf-RING_11
zf-ANAPC11
GAS
EzrA
DUF1664
Zn_ribbon_8
COG3_N
TSNAXIP1_N
bZIP_1
zf-RING_Vps41
TMF_TATA_bd
DUF5600
Uso1_p115_C
zf-RING_16
Tropomyosin
KASH_CCD
zf-RING_10
NTP_transf_5
FANCL_C
Prok-RING_4
zf-RING-like
zf-Nse
zf-RING_4
zf_RING_Vps8
DUF5595
COG4_N
APG6_N
Cast
Cnn_1N
Motif
Other DBs
NCBI-GeneID:
113825807
NCBI-ProteinID:
XP_027234444
LinkDB
All DBs
Position
8:26652183..26677620
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AA seq
465 aa
AA seq
DB search
MRAACVICGDLFIHTDDISATPCGHTFHTVCLIQWIERSKSCPQCRHKATEKSLVKLFFD
SGGADTSHVDPDTLQHQIDSLKFQIRLKEQEMKNFKDNSETLTKQNKGLREECKTITSQL
HAKDTTIMALKSQLQFMDRITKEAQKAKEEAKKLREQLRVLQNVESIVSGTNDDVEAMLV
SYSNNPDSTRALATFCSILKKEMNKTVDDKRRFRDEATSLRNKLREVKHSYNIASNELTT
VQQTNKNLQDDVMSLEKENKSLMKKMEALQQAIVSPSGDVKNSALHRLIAESPAPADLKR
PRLSSPDEEDLMITPEVVRKMSRSEQVTPPDESFEIVGSQDSTTPPMKGSPSKSKFVFQI
VLFPGRRPLAVTTNISNKSKQHHNIFAKNKPTLQNIGMSSQLNSQGSGTQIGYDGLGGHH
KVDEFPKPRPVLLKKKSVKVVTKGGSAARVQSTTLKNFFQNTFDD
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgctgcctgtgtaatctgtggggatctcttcatccacacagatgacatctctgca
accccctgtgggcacacattccatactgtgtgtctgatacagtggattgaaaggtcaaaa
tcatgcccacagtgtcgccacaaagctacagagaagagcttggtaaaactgttttttgat
tcaggaggagcagatacatcacatgttgaccctgacacattgcagcaccagattgacagc
cttaagttccaaatccgcttgaaggagcaagaaatgaaaaactttaaggataattcagaa
actttgaccaagcagaataaaggcctcagagaagagtgcaaaactatcaccagccagctt
catgccaaagacactacaattatggctctgaagtcacagctccagttcatggaccgcatc
accaaggaagcccagaaggcaaaagaggaagccaagaaactgagagaacagcttagagtg
cttcaaaatgtggagagcatagtttcaggcaccaatgatgatgtggaagcaatgctggtg
tcatattccaacaacccagacagcacaagagccttggccaccttttgttccatactgaaa
aaggaaatgaacaagacagttgatgacaagaggaggttccgggatgaagctacatcacta
cgaaacaagctgagagaggtcaaacacagctataacattgcttcaaatgagctgactact
gtacaacagacaaataaaaacctccaagatgatgttatgtctcttgagaaggaaaataaa
agcctaatgaagaagatggaggcattgcaacaggccattgtatctccttcaggagatgtg
aaaaatagtgcattgcatcgtttaatagcagagagcccagcacctgcagacctgaaaaga
ccccgtctatccagcccggatgaggaggatttgatgatcacacctgaagtagtgcgtaaa
atgtcacgctcagagcaagtgacccctcctgatgaaagctttgaaattgtggggagtcag
gactcaacaacaccgccgatgaaaggttcaccttccaagtccaaatttgtgtttcagatc
gtactttttcctggtcgtcgtccccttgctgttacaacaaacatttcaaataagtccaag
caacaccacaacatatttgcaaagaataaaccaactcttcagaatataggtatgagctct
cagttgaactcgcaaggtagtggcacgcaaataggctatgatggtcttggaggccatcac
aaagtggacgagttcccaaagcctcgcccagttttactcaaaaagaagagtgtgaaagtt
gttacgaaaggtggctcagcagcaagagtacagagcactactttgaaaaacttttttcag
aatacttttgatgactaa
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