KEGG   Penaeus vannamei (Pacific white shrimp): 113826036
Entry
113826036         CDS       T06111                                 
Symbol
Sf3b2
Name
(RefSeq) splicing factor 3B subunit 2 isoform X1
  KO
K12829  splicing factor 3B subunit 2
Organism
pvm  Penaeus vannamei (Pacific white shrimp)
Pathway
pvm03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pvm00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    113826036 (Sf3b2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pvm03041]
    113826036 (Sf3b2)
Spliceosome [BR:pvm03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    113826036 (Sf3b2)
 Complex B
    113826036 (Sf3b2)
 Complex C
   U2 SnRNP specific factors
    113826036 (Sf3b2)
SSDB
Motif
Pfam: DUF382 PSP SAP DUF3682
Other DBs
NCBI-GeneID: 113826036
NCBI-ProteinID: XP_027236274
LinkDB
Position
28:complement(5623023..5634811)
AA seq 1047 aa
MAVTEEELAKLRVVDLKAKLSELGLPTQGLKSELVERLYQHLLAQEEAANMEEDKDGEMD
EGGQEGDHADQLGQAENRELEEQQQEEDMVVEEEEEEEGHEIHQQEQQQELKQQAQPPQQ
EQGEPPQDQNELLRKAREQEEMLARQRQLEEERLMQQKVREQQRLLEQQQQQKQQEDLYR
LQEAALKEKQREEHEKQVQLLRLQREALKQKEEEHKIPAAPAGAPGITAPIPRASAPAPV
TPVPPGVGTVPVLGPPGVKASVVVPPPATSFTPHPQGPINVGGPAGFTGPAPIPSAGLLG
PAPGSVPKSTPSPQQPPLRPPLLQTATTRAPTSIAAQRPPMPMANTSPRPPGAGLLGAAP
PTMGPPGENQDKNEKPPPLMSLHVTAPKEETPREVKLPQALEQALAFKTERAKQVGVNPE
DVEKVEREGLAGMDELESLPPQPRPPVPVAKTQPSFIPTGYEEEDDEAPEEPNQKSKQEK
SKKKKKKKRKGRHRFQEELDRQRNERLKKDKSDAEDPNIEIEYVQDTIDLDITDPNYRHF
AKIFEAFRIAEPEPKVEEEKVVPKTEIPLVDPKKLGSKVPGIPLDDDDDDDDDIKKEEDD
KPKLSKRKMKLLKRMSIAELKQTVSRPDVVEMHDVTAKDPKLLVHLKATRNTVPVPRHWC
FKRKYLQGKRGIEKPPFELPDFIKRTGIMEMRAALQEKEDQKTLKAKMRDKVRPKMGKID
IDYQKLHDAFFKWQTKPKMTIHGDLYYEGKEFETKMKDKKPGEMSDDLRIALGMPVGANA
HKVPPPWLIAMQRYGPPPSYPNLKIPGLNSPIPEGCSFGYHAGGWGKPPVDNMGKPIYGD
VFGTQSKDFDSPLTEEEVERTMWGELESESEEESEEESEEESDEDVSGLVTPGETGLVTP
SGISSLPAGLETPDMIELRKKRMETEMEGGDTPALYTILPEKRTETMGRAMMGSTHTYDL
GAAGVGGAAARSAPQGVEVALDPSELDLVDTDAMAARYEATLREQQKGEEEDFSDMVAEH
AAKQRNKRRKQQQDQAKPAKKYKDFKF
NT seq 3144 nt   +upstreamnt  +downstreamnt
atggccgtcacggaggaggagttagccaagctcagggtggtcgacctgaaggccaaacta
tccgagcttgggctgcccactcaaggtctaaagagtgagcttgtggaacgactttatcaa
cacctgcttgcccaggaagaggctgccaatatggaagaggacaaagatggggaaatggat
gagggaggccaagagggagaccacgcagaccagctggggcaagcagagaacagagaactg
gaggagcagcagcaggaggaggacatggtggtggaggaagaggaggaggaagaggggcat
gagatacaccagcaggagcaacagcaggagctaaagcagcaagctcagccaccgcagcaa
gagcaaggggaaccacctcaggatcagaatgaactccttaggaaggcaagggaacaagaa
gagatgttagcccgtcagagacagttggaggaagaacgactgatgcagcagaaggtcagg
gagcaacagcggcttttagaacagcagcagcaacagaaacagcaggaagacctgtaccgt
cttcaagaagcagctctgaaggaaaagcagagggaagaacacgagaaacaagtgcagctg
ctaaggctgcagagggaggctctgaaacagaaggaagaagaacataaaataccagctgca
ccagcaggtgctccaggcattacggccccaatcccacgggcatctgcacctgcacctgta
actccagtaccaccaggggttggcacagttccagttctggggcctcctggtgttaaggct
tcagtggttgtgccaccacctgcaacatcattcaccccacatcctcaaggaccaatcaat
gttggcggtcctgctggattcacaggcccagcccccatcccaagtgctggtctcttgggc
cctgcaccagggtctgtgcccaagtccacaccctcaccacagcagccacctctcaggcct
ccacttcttcaaacagctacaactcgagcaccaacctccattgcagcacagcgtccgcct
atgcctatggcaaacacttcacccagacctccgggtgcagggctgttaggtgctgctcct
cctactatggggccccctggtgaaaaccaagacaagaacgagaagccgcctccacttatg
tccctgcatgtaacagctcccaaagaagagactcctcgtgaggtgaagctaccacaggcc
ttggagcaggccctggccttcaagacagaacgtgccaagcaggtgggtgtgaatccagaa
gatgtggagaaggttgagagagaaggactggctggcatggatgagctggagagccttcca
cctcagccacgtccccctgtgcctgtggccaaaactcagccctcctttattccaactggg
tatgaagaggaagacgacgaagccccagaggaacccaatcagaagagcaagcaggagaag
agcaagaaaaagaaaaagaagaagaggaagggacgtcatcgcttccaggaggagttggac
aggcaaaggaatgagaggttgaagaaggacaaaagcgatgcagaagatccaaacattgag
attgaatatgtgcaggatactattgacctagatatcactgatcctaactacagacatttt
gccaaaatatttgaggctttccgtattgcagaaccagagccaaaggtggaagaagagaaa
gtggttcccaagacagaaattccactagtggatccaaagaaacttggttcaaaggttcca
gggattcccttggatgatgacgatgatgatgatgatgacataaaaaaagaggaggatgat
aagccaaagttatccaaaagaaaaatgaaactgcttaagcggatgagcattgcagaacta
aagcagacagtgagtcgtccagatgtagttgaaatgcatgatgtcacagcaaaggaccca
aagttactggtgcacctaaaagccacaagaaatactgtacctgtcccacgacactggtgt
ttcaagcgcaagtacctccaaggtaagcgtggtattgaaaagcctcctttcgagctgcca
gacttcatcaaacgtacaggaattatggagatgagagcagccttacaggagaaagaggat
caaaagacactcaaggcaaagatgcgagacaaggtcaggcccaagatgggtaagattgac
attgattatcagaagctccatgatgctttcttcaagtggcagaccaaacccaagatgaca
atacatggagacctttactatgagggcaaagaatttgaaacaaagatgaaagataagaaa
cctggagaaatgagtgatgatctgaggatagccctgggtatgcctgtgggtgctaatgca
cacaaagtcccgcctccatggctcattgccatgcagcgttatggtccacctccatcatat
ccaaacctaaaaatacctggcctcaattcacctatacctgaaggctgtagttttggttac
catgcaggtggctggggtaaacctcctgtagataatatgggtaaacctatatatggtgat
gtctttggtacccagagcaaagattttgactcaccgctaacagaagaggaggtagaaagg
actatgtggggagaactagaaagtgagagtgaagaggagtcagaagaagagagtgaggag
gaatctgatgaggatgtcagtgggttagtaactcctggagaaactggtctagtcactcct
tcaggcattagctcattaccagctggcttggagaccccagacatgattgaattgagaaag
aaacgcatggaaacagaaatggaaggtggcgacactccagcactatacactatcctccca
gagaagcgcacagagaccatgggacgtgcaatgatgggctcaacacacacctatgacttg
ggagctgcaggtgtaggtggggcagcagctcgttcagcaccacagggagtcgaggtggcg
cttgatccctcagaattagatttggtggacaccgatgccatggctgcacgttatgaagct
actctcagggaacagcagaagggggaagaagaagacttctcagatatggtggctgaacat
gcggcaaagcagcggaataagagaaggaagcagcaacaagaccaagctaagccagccaag
aagtacaaggactttaagttctaa

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