Penaeus vannamei (Pacific white shrimp): 113826054
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Entry
113826054 CDS
T06111
Symbol
Skp2
Name
(RefSeq) S-phase kinase-associated protein 2 isoform X1
KO
K03875
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Pathway
pvm04068
FoxO signaling pathway
pvm04120
Ubiquitin mediated proteolysis
pvm04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
113826054 (Skp2)
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
113826054 (Skp2)
04150 mTOR signaling pathway
113826054 (Skp2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvm04121
]
113826054 (Skp2)
Ubiquitin system [BR:
pvm04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
113826054 (Skp2)
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Gene cluster
GFIT
Motif
Pfam:
F-box-like
F-box
LRR_At1g61320_AtMIF1
LRR_At5g56370
Motif
Other DBs
NCBI-GeneID:
113826054
NCBI-ProteinID:
XP_027234733
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All DBs
Position
26:32248998..32255629
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AA seq
445 aa
AA seq
DB search
MDVDVMSGKRSYDKENSNSSMKCSKWSLGGDVGTDPPLLADMGLSILQDEEEMTGPTPTP
PATEVNTSNPPPAPKVLQQSNQNVVGHGSFLPDDLVNEEEFFVYKRRRIDAIAGDDKFNR
MSDELILAVFRWLPKFMLARCAQVCRRWKRLAFDESLWRRLDLGGKTLNPGVVGRVILRG
SSILRLAKAEVDGPIFSPQLQYLPSLPPIRSKLQYLDLSMAAIEPPALEELLSVCFDLKK
LSLEHCTLNQTICTHIANNHNLDTLNMAMCYGLNHSCIVNILTNCKKLVSLNLAWTGLSS
EDLRVICRRFPKSLERLNISGCRNTLSDTHVRLLAEQSPGLVELDVSDCTQLTAASVSTI
ISELRHTEYLAFSRCYTIQPDAYLELKSMPHLLYLDLYGILNESALSTLRQSLPHIQINK
YLFSSVARPTVGIRRTSVWGLRVRD
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atggacgtagatgttatgtcaggaaaacgaagttatgataaagaaaacagcaacagtagt
atgaagtgtagcaaatggagtttaggtggagatgttggtacagatcctccactcctggca
gacatgggcctgtctattcttcaggatgaggaggagatgacaggacctacacctactcca
ccagccactgaagtcaacacaagtaaccctcctccagcaccaaaggtattacaacagtca
aatcagaatgtagtcggtcatggttcctttcttcctgatgatttagttaatgaagaagaa
ttttttgtttacaaacgaagaagaatagatgccattgcaggtgatgacaaattcaaccgc
atgtcagatgaattaatcttagcagtatttcgatggctcccaaagtttatgttggcaaga
tgtgcacaggtgtgccgccgatggaaaaggcttgcttttgatgaatctctgtggcgaaga
cttgatcttggtggaaagaccctcaatcctggggtggttggcagagtcattctcagagga
tcaagtatacttagactagcaaaagcagaggtggatggtccaattttttcaccacagctc
caatatcttcctagtctacctccaataaggagtaagctacaatacttagatcttagtatg
gctgcaatagaaccccctgcgcttgaagagttgttgagcgtttgttttgatctgaagaaa
ttaagcctggagcattgcactctcaaccagacaatttgcacacacatcgccaacaaccat
aacttagatacgcttaatatggccatgtgctatggcttgaaccactcctgtattgttaat
atactcactaactgtaaaaaattggtaagtttgaatctagcttggactggattgtcttca
gaggatctacgggtaatatgccgtcgcttcccaaaatcacttgaacggttgaatatttct
ggttgcagaaacacattatctgatacacatgtaagattgttggcagaacagtcacctggc
ttggtagaattagatgtgagtgattgcactcagctgactgctgcttctgtatctacaata
attagtgaactgcgtcacacagaatacttagccttctcacgttgctacaccatacagcca
gatgcttacctggagctgaagtccatgccacatctactctacttggatctctatggcata
ctgaatgagagtgcgctcagtaccctgcgacaaagcctgccacacatacaaattaacaaa
tatctattttcttctgtggctcggcctacagtgggtatacgcaggacgtctgtttggggg
ctgagagtcagagattaa
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