Penaeus vannamei (Pacific white shrimp): 113826626
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Entry
113826626 CDS
T06111
Name
(RefSeq) probable ATP-dependent RNA helicase DHX35
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pvm03041
]
113826626
Enzymes [BR:
pvm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
113826626
Spliceosome [BR:
pvm03041
]
Complex C
Other components
Complex C specific factors
113826626
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
HA2_N
AAA_22
DEAD
ABC_tran
Cas3-like_C_2
AAA_29
T2SSE
Motif
Other DBs
NCBI-GeneID:
113826626
NCBI-ProteinID:
XP_069990496
LinkDB
All DBs
Position
19:complement(27983888..27993016)
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AA seq
683 aa
AA seq
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MSYKLKFLKPGDDIFTEDRSDVDQTNGTSFIYNPHHSMTIDKQRQRLPVFPARNHILYLI
EKFQTTIVVGETGSGKSTQLPQYLREAGWPVDGIIGITQPRRVACTSLANRVADECDVIL
GREVGYSIRFDDRCIPGTTQIKYMTEGILVREMMADPLLRQYSVIILDEVHERTLYTDIV
LGLMKKILRKRRDLRLVISSATVDADQLYNFFNFNTTSKREKDTAAVISVEGRTHPVDIF
YLEEGAADYVKCSVETVMKIHRKEPAGDILVFLTGVEEVDNCVSYLKEEAASLKKNEDSL
LVLPMHGSLSNSEQLRAFQSSPVGVRKVVVATNIAETSVTIPGIVYVVDCGFAKLRWYNV
KSHTDSLVVVPTSRASATQRAGRAGRVRSGKVYRLYPEDEFDKLSEVTPPEMVRTNLSPA
VLSLMALGIENMLRFDFPSPPPARHLTAALDELVALGALSEDGTLTRPLGQQMAEFPLSP
QLSKMLLVSGDFECSQEILSVVAMLQVQNVFITPRGQGPQAKICHRKFQVKEGDLITLLN
VFTAYVKQGESKQWCVKNFLNHRALRRASEIRGRMEKLIANFEIPLKSCEGGVDAVCKCI
TAGMFPNAAFLHHSGSYKTVRGQQTLHIHPSSMLYKESQPQWVLFHEVLHTSRVFMRDLT
VIDPAWLLELAPHFYEKATLRNQ
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgtcttacaaacttaaatttctaaaaccaggtgatgacatatttactgaagaccgtagt
gatgtagaccagacaaatgggacttcctttatctacaatccccaccattctatgacaatt
gataaacaacgccagaggttgcctgttttcccagctcgaaaccatatactctatttgatt
gagaaattccagaccaccatagttgttggagagactggttctggaaagagtacacaatta
ccacagtatctcagagaagctggctggcctgtagatggaataatcggcataacacagcca
aggcgtgttgcatgtacctcactcgccaatcgtgtcgcagatgagtgtgatgttatatta
gggcgagaagttggttattcaatacggtttgatgatcgctgcataccagggaccacacaa
atcaagtacatgacagagggcatacttgttcgagagatgatggctgatcccttgttaaga
cagtactcagtaataatcttggatgaggtgcatgaaagaacgctgtatacagacatagtt
ctaggcctgatgaagaaaattttaagaaaacgtcgagatttgcgattagtcatcagctca
gcaactgtggatgcagatcaactgtacaactttttcaacttcaatacaaccagcaagaga
gagaaagatacagcagcagttatttcagtggagggccgtactcatccagttgacatcttt
tatctagaggaaggagcagctgactatgtaaaatgtagtgttgagacagtaatgaagatc
cacagaaaagaacctgctggcgacattctggtttttctaacaggagtagaagaggttgac
aactgtgtatcctatctgaaggaagaggctgcttctctcaagaaaaatgaagattctctg
cttgtcttgccaatgcatgggagtctaagtaacagtgaacagttacgtgccttccagtct
tcacctgttggagtaagaaaagttgttgttgctaccaacattgctgagacttctgttaca
attcctgggattgtgtatgtggtggactgtggctttgcaaagcttcgatggtacaatgtg
aagagtcacactgattcattggtagttgttcctacctcaagagcatctgccactcagaga
gctggaagagctggaagggtgagatcaggaaaagtgtacaggttgtatccagaggatgag
tttgacaagctaagtgaagtcaccccacctgagatggtcagaactaatctctcgccagca
gttctgagtctcatggccttagggattgaaaatatgctcaggtttgacttcccttcacca
cctcctgcccgacacctaacagctgccttggatgaactcgttgccctcggagctctcagt
gaagatggcacactgaccagacctctaggacaacagatggcagagtttcccttgtctcca
cagctatcaaagatgcttttagtgtcaggggattttgaatgttcacaagaaatactgtca
gtggtagcaatgctgcaagttcagaatgtattcataaccccaagaggccagggacctcaa
gcaaaaatttgccacagaaagtttcaggtgaaggaaggagatctgataacactgttgaat
gtattcactgcttatgtcaaacaaggtgaatcaaagcagtggtgtgtcaagaacttcctc
aatcatcgtgcactccggagagcatctgaaatccggggaagaatggagaaactaatagct
aattttgaaattcctctaaaatcatgtgaaggtggtgtcgatgcagtgtgcaaatgtatc
acagctggcatgtttccaaatgctgctttcctccatcattctggatcatacaaaactgtg
cgaggacaacaaaccctgcatatccatccatcatctatgctctacaaagaaagtcaacca
caatgggtgctgtttcacgaggtgctacacacatctcgggtattcatgagggaccttact
gtcattgatcctgcttggttattagaactagcccctcatttttatgagaaggcaacttta
aggaatcaataa
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