Penaeus vannamei (Pacific white shrimp): 113826853
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Entry
113826853 CDS
T06111
Symbol
Vps35
Name
(RefSeq) vacuolar protein sorting-associated protein 35 isoform X1
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Pathway
pvm04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
113826853 (Vps35)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvm04131
]
113826853 (Vps35)
Membrane trafficking [BR:
pvm04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
113826853 (Vps35)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
14-3-3
Motif
Other DBs
NCBI-GeneID:
113826853
NCBI-ProteinID:
XP_027235556
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Position
32:complement(31403359..31440849)
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AA seq
804 aa
AA seq
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MEGETDNMVSPMDEQDKLLDEAMGAVRGQAFQMKRCLDKGRLMDGLKHASNMLGELRTSL
LSPKTYYELYMCICDELRHLEMYLIDEFQKGHRVADLYELVQYAGNIVPRLYLLITVGLV
YIKTNETCKRDILKDLVEMCRGVQHPLRGLFLRNYLLQCSRNILPDMEDPPVGHNPEEFP
AGSISDSVDFILMNFAEMNKLWVRMQHQGHSRDKEKRERERQELRILVGTNLVRLSQLEH
VDVERYKKSVLPGILEQAVSCRDPLSQEYLMECIIQVFPDEFHLQTLSAFLKACAELHSE
VNVKNIIISLIDRLANFAHREDGTGIPDEIKLFEIFSEQVSQVIKSRPDMPMEDTVSLQV
SLVNLAQKCYPDEIEYVDKVMQNTLEVFQKLNIDKIHSGSALGKELSRLLRLPADNYNNL
LTVLQLQYYTPLLNLLDYSGRKILSTYLVTNAVDNETCIPTQEQVDAVLSMIASLICDQS
DQPLVDPDPEDLAEEQGLLARFLHLFKSTNSDQQYLILTTARKHLGAGGNKRVLYTLPPL
VFQAYQLAFKYYAEREEDDKWGKKVHKIFQFSHQTITALVKAEYAELPLRLFLQGALAID
KIDFENHETVAYEFMSQAFSLYEDEISDSKAQLAAMTLIMGTFQQTTCFSEENHEPLRTQ
CALAASKLLKKPDQARGVTTCSHLFWSARSLATNKEELRDEKRVLECLKKAVRIANQCMD
PSAQIQLFVELLNHYIYFYEKGNTQVTVAMLNQLISKVKEDLANLETTEDTDQISRHLTN
TLTHLQLRLQEPPSDGPNYEGLQL
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atggaaggtgaaacagataacatggtgtccccaatggacgaacaagataagctcctggat
gaggccatgggtgccgtccgaggacaggctttccagatgaagaggtgtttagacaagggg
cgccttatggatgggctgaaacatgcttcaaacatgctgggtgaacttagaacatctttg
ctgtctcccaagacctattacgaattatatatgtgcatttgtgatgaacttcggcatttg
gaaatgtaccttattgatgagttccagaagggtcaccgagtggcagacttgtatgaactt
gtccagtatgcaggaaatattgtaccacgactatacttgctgatcacagttggtttggtg
tacatcaagactaatgaaacatgcaagcgagacattctgaaggacctggtggagatgtgc
cgaggagtccagcatcccctgcgtggtcttttcctgaggaactaccttcttcagtgcagc
aggaacattctgcctgacatggaagaccctccagttggtcataatcctgaggagtttcct
gcaggatctatatcagacagtgtagatttcatcttgatgaactttgcggagatgaataaa
ctgtgggtaaggatgcagcatcagggccactcacgagacaaagagaaaagagaacgagag
agacaggagttgcgtatcttagtgggaaccaatctggttcgtctgtcacagctggagcac
gttgatgtagagaggtataaaaagagtgttttgcctggaattttagagcaggctgtgagt
tgcagagaccctctttctcaggaatatctaatggaatgcataattcaggtgttcccggat
gagttccacttgcagacactcagtgcttttctgaaggcatgtgctgaacttcactcagag
gtcaacgtcaagaacattatcatttctctcattgaccgactcgccaactttgctcaccgg
gaggatggcacaggcattccagatgagatcaagttgtttgaaatcttctctgaacaggtc
tcacaggtcatcaagtctcgtcctgatatgccaatggaagatacagtcagtcttcaagtg
tctttggttaacttggcacagaaatgctaccccgatgagattgaatatgttgataaagtc
atgcagaatactcttgaagttttccagaagctgaacatagacaagatccactctggctct
gcacttgggaaggaactgagtcgactcctgcggctgccagctgacaactataacaatctc
ctcacagtgctacagctgcagtactacacccccttactcaacctcctagattacagtggt
cgcaagatcttgagcacctaccttgtgactaatgcagtggacaatgagacctgcatacca
acccaagagcaggttgatgcagtactttccatgattgcatccttgatctgtgaccagtct
gatcagcctttggtcgacccagaccctgaagatttggctgaggagcaagggttattagcc
agatttcttcatcttttcaagtccacaaacagtgaccagcaatatctgattttgacaact
gctcgtaaacatttaggtgctggtggtaacaagagagttctgtatacactccctccacta
gtgttccaggcttatcagttggctttcaagtattatgctgaaagagaagaggatgataaa
tggggcaagaaggtgcacaaaatcttccagttcagccaccagacaatcacagctttggtc
aaggcagagtatgcagagttaccactgcgattgttcttacaaggtgctctggcaatagac
aagattgattttgaaaaccatgagactgttgcctacgagtttatgtcacaggctttctct
ctgtatgaggatgaaatcagtgatagcaaagctcaactggcagccatgactttgatcatg
ggtacgttccaacaaacaacttgcttcagtgaagaaaatcatgagcccctcagaacacag
tgtgctcttgcagcctcaaaattgcttaagaaacctgaccaagcaagaggtgtgactact
tgttctcacctgttctggtcagcacgatccttagctaccaataaggaggagctacgggat
gagaagagagtgctggagtgcttaaagaaagctgtgcgtattgctaaccagtgtatggat
ccttctgcacaaatccaactttttgttgaacttctcaaccactatatatacttttatgaa
aagggaaatactcaggtgacagttgctatgcttaatcagctgataagcaaggtgaaggag
gatttagccaacttggaaacaactgaagatacagaccagatatcaaggcacctgaccaac
acactgacacacttgcagctcaggctacaagaaccccctagtgatggccccaattacgag
ggcttgcagctttaa
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